Os01g0635200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Homeodomain-like containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0635200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Homeodomain-like containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.58 | 0.612 | 11.7 | -3.36 | 0.197 | 2.12 | 0.678 | -2.76 | -1.56 | 4.34 | 20.6 | 1239 | -- | -- |
| 180.53 | 0.626 | 11.6 | -2.7 | 0.374 | 2.02 | 0.629 | -- | -1.46 | 4.27 | 19.22 | 1647 | -- | -- |
| 170.69 | 0.608 | 11.7 | -3.34 | 0.22 | 2.14 | -- | -2.72 | -1.57 | 5.4 | 20.77 | 1211 | -- | -- |
| 174.37 | 0.615 | 11.6 | -2.69 | 0.2 | 2.47 | -- | -- | -1.36 | 4.54 | 16.1 | 1237 | -- | -- |
| 172.87 | 0.612 | 11.7 | -3.35 | -- | 2.15 | -- | -2.72 | -1.56 | -- | 20.96 | 1233 | -- | -- |
| 289.7 | 0.798 | 11.5 | -1.88 | 0.451 | -- | 0.582 | -- | -0.9 | 2.88 | -- | -- | -- | -- |
| 290.84 | 0.799 | 11.5 | -1.89 | 0.452 | -- | -- | -- | -0.903 | 2.8 | -- | -- | -- | -- |
| 176.21 | 0.618 | 11.6 | -2.71 | -- | 2.7 | -- | -- | -1.37 | -- | 14.84 | 1222 | -- | -- |
| 341.69 | 0.861 | 11.5 | -- | 0.249 | 1.55 | -- | -- | -0.913 | 4.42 | 13.48 | 1144 | -- | -- |
| 302.68 | 0.813 | 11.5 | -1.88 | -- | -- | -- | -- | -0.892 | -- | -- | -- | -- | -- |
| 385.44 | 0.918 | 11.4 | -- | 0.415 | -- | -- | -- | -0.692 | 2.76 | -- | -- | -- | -- |
| 333.09 | 0.85 | 11.5 | -- | -- | 1.3 | -- | -- | -0.911 | -- | 22.3 | 1176 | -- | -- |
| 395.44 | 0.928 | 11.4 | -- | -- | -- | -- | -- | -0.684 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 169.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 7 | 170.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 17 |
| 15 | 170.30 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 24 | 170.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 204 | 171.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 268 | 171.84 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |