BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0635200 Os01g0635200|AK112054
(85 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75250.1 | chr1:28245073-28245453 REVERSE LENGTH=127 103 1e-23
AT2G21650.1 | chr2:9259654-9260419 FORWARD LENGTH=102 100 3e-22
AT4G39250.1 | chr4:18271457-18271857 REVERSE LENGTH=101 98 9e-22
AT1G19510.1 | chr1:6756483-6757290 REVERSE LENGTH=101 89 7e-19
AT2G18328.1 | chr2:7964478-7964711 FORWARD LENGTH=78 80 2e-16
AT5G08520.1 | chr5:2755470-2757741 REVERSE LENGTH=299 73 4e-14
AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299 72 4e-14
AT5G05790.1 | chr5:1740724-1741671 REVERSE LENGTH=278 71 1e-13
AT4G36570.1 | chr4:17254660-17254836 FORWARD LENGTH=59 70 2e-13
AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289 69 3e-13
AT3G11280.1 | chr3:3533477-3534393 REVERSE LENGTH=264 68 9e-13
AT5G04760.1 | chr5:1373752-1374529 REVERSE LENGTH=216 57 2e-09
AT5G01200.1 | chr5:77116-78294 FORWARD LENGTH=268 56 3e-09
AT1G49010.1 | chr1:18132714-18133778 FORWARD LENGTH=315 56 3e-09
AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338 54 2e-08
AT4G09450.1 | chr4:5983277-5984500 FORWARD LENGTH=201 47 1e-06
AT3G10585.1 | chr3:3308567-3309429 REVERSE LENGTH=166 45 8e-06
>AT1G75250.1 | chr1:28245073-28245453 REVERSE LENGTH=127
Length = 126
Score = 103 bits (258), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Query: 1 MASMSVSSSRAPQWTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLV 60
MAS S SS +P WT QN+ FERALAVYD+DTP+RWHN+A+AV GK+ +EVK +YD+LV
Sbjct: 1 MASNS-RSSISP-WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILV 58
Query: 61 EDVKRIETGKVPFPAYRC 78
ED+ IETG+VP P Y+
Sbjct: 59 EDLINIETGRVPLPNYKT 76
>AT2G21650.1 | chr2:9259654-9260419 FORWARD LENGTH=102
Length = 101
Score = 99.8 bits (247), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 60/78 (76%)
Query: 1 MASMSVSSSRAPQWTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLV 60
MAS S+SS + WT +QN+ FERALAVYD+DTP+RWHN+ARAV GK+ +E K YDLLV
Sbjct: 1 MASGSMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLV 60
Query: 61 EDVKRIETGKVPFPAYRC 78
D++ IE G VPFP Y+
Sbjct: 61 RDIESIENGHVPFPDYKT 78
>AT4G39250.1 | chr4:18271457-18271857 REVERSE LENGTH=101
Length = 100
Score = 97.8 bits (242), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 60/85 (70%)
Query: 1 MASMSVSSSRAPQWTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLV 60
MAS S+SS + WTA+QN+ FE+ALA YD+DTP RW N+A+ V GK+ +EVK +Y+LLV
Sbjct: 1 MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLV 60
Query: 61 EDVKRIETGKVPFPAYRCPQPAIAG 85
+D+ IE G VPFP YR G
Sbjct: 61 QDINSIENGHVPFPNYRTSGGCTNG 85
>AT1G19510.1 | chr1:6756483-6757290 REVERSE LENGTH=101
Length = 100
Score = 88.6 bits (218), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 49/62 (79%)
Query: 17 RQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLVEDVKRIETGKVPFPAY 76
+QN+ FERALAVYD+DTP+RW N+A+AV KSA+EVK +YD+LVED+ IE VP P Y
Sbjct: 15 KQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLPKY 74
Query: 77 RC 78
+
Sbjct: 75 KT 76
>AT2G18328.1 | chr2:7964478-7964711 FORWARD LENGTH=78
Length = 77
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 48/61 (78%)
Query: 17 RQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLVEDVKRIETGKVPFPAY 76
R+++QFE ALA +D+DTP+RW IARAV GKS +EVK +Y+LL+ DV IE+G+ P P Y
Sbjct: 14 REDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQPRY 73
Query: 77 R 77
R
Sbjct: 74 R 74
>AT5G08520.1 | chr5:2755470-2757741 REVERSE LENGTH=299
Length = 298
Score = 72.8 bits (177), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%)
Query: 14 WTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLVEDVKRIETGKVPF 73
W+ + FERALA ++ ERW IA V GKS +++K +Y+LLVEDV RIE+G VP
Sbjct: 12 WSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPL 71
Query: 74 PAYRCPQ 80
PAY P+
Sbjct: 72 PAYGSPE 78
>AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299
Length = 298
Score = 72.4 bits (176), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 9 SRAPQWTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLVEDVKRIET 68
+R +WTA +N++FE ALA YD+DTP+RW +A + GK+ +V Y L EDV IE
Sbjct: 24 NRGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRELEEDVSDIEA 83
Query: 69 GKVPFPAY 76
G +P P Y
Sbjct: 84 GLIPIPGY 91
>AT5G05790.1 | chr5:1740724-1741671 REVERSE LENGTH=278
Length = 277
Score = 70.9 bits (172), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%)
Query: 10 RAPQWTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLVEDVKRIETG 69
++ WT +N++FERALAVY DTP+RW +A + GK+ +V Y L ED+ IE G
Sbjct: 27 QSSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAG 86
Query: 70 KVPFPAYRCPQPA 82
VP P YR P
Sbjct: 87 LVPIPGYRSVTPC 99
>AT4G36570.1 | chr4:17254660-17254836 FORWARD LENGTH=59
Length = 58
Score = 70.1 bits (170), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 39/44 (88%)
Query: 14 WTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYD 57
WT ++N+ FERALA YD+DTP+RWHN+ARAV GKSA+EV+ +Y+
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYE 55
>AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289
Length = 288
Score = 69.3 bits (168), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%)
Query: 7 SSSRAPQWTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLVEDVKRI 66
+S WTA +N+ FE ALAVYD +TP+RW +A + GK+ +V Y+ L DV I
Sbjct: 27 ASGEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSI 86
Query: 67 ETGKVPFPAYRCPQP 81
E G +P P Y P
Sbjct: 87 EAGLIPVPGYITSPP 101
>AT3G11280.1 | chr3:3533477-3534393 REVERSE LENGTH=264
Length = 263
Score = 68.2 bits (165), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 14 WTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLVEDVKRIETGKVPF 73
WT +N+ FERALA+Y D+P+RW +A + GK+ +V Y L EDV IE G+VP
Sbjct: 33 WTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPI 92
Query: 74 PAY 76
P Y
Sbjct: 93 PGY 95
>AT5G04760.1 | chr5:1373752-1374529 REVERSE LENGTH=216
Length = 215
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 11 APQWTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLVEDVKRIETGK 70
+ QWT +++ FE+AL ++ +P RW IA + KSA EV+ +Y++LV DV I++G+
Sbjct: 3 SSQWTRSEDKMFEQALVLFPEGSPNRWERIADQLH-KSAGEVREHYEVLVHDVFEIDSGR 61
Query: 71 VPFPAY 76
V P Y
Sbjct: 62 VDVPDY 67
>AT5G01200.1 | chr5:77116-78294 FORWARD LENGTH=268
Length = 267
Score = 56.2 bits (134), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 10 RAPQWTARQNEQFERALA-VYDRDTPERWHNIARAVAGKSADEVKLYYDLLVEDVKRIET 68
R WTA +N++FE+ALA + D+D E W IA + GK+ +V Y L +DV IE
Sbjct: 26 REATWTAEENKRFEKALAYLDDKDNLESWSKIADLIPGKTVADVIKRYKELEDDVSDIEA 85
Query: 69 GKVPFPAY 76
G +P P Y
Sbjct: 86 GLIPIPGY 93
>AT1G49010.1 | chr1:18132714-18133778 FORWARD LENGTH=315
Length = 314
Score = 56.2 bits (134), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 14 WTARQNEQFERALAVY---DRDTPERWHNIARAVAGKSADEVKLYYDLLVEDVKRIETGK 70
W+ + + FE A+A++ + T ++W+ ++ V K+ +EVK +Y +L+EDVK IE G+
Sbjct: 8 WSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIENGQ 67
Query: 71 VPFPAYR 77
VP P Y
Sbjct: 68 VPLPRYH 74
>AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338
Length = 337
Score = 53.5 bits (127), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 4 MSVSSSRAPQWTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLVEDV 63
+SV SS W+ + FE+ALA+Y+ T RW IA V GK+ ++V +Y++L DV
Sbjct: 7 ISVGSS----WSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNILARDV 62
Query: 64 KRIETGKVPFPAY 76
IE+G V P Y
Sbjct: 63 MLIESGCVRLPDY 75
>AT4G09450.1 | chr4:5983277-5984500 FORWARD LENGTH=201
Length = 200
Score = 47.4 bits (111), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 12 PQWTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLVEDVKRIETGKV 71
PQWT +++FE AL +P NIA + K EV+ YY LV D++RIE+GK
Sbjct: 5 PQWTRVDDKRFELALLQIPEGSPNFIENIAYYLQ-KPVKEVEYYYCALVHDIERIESGKY 63
Query: 72 PFPAY 76
P Y
Sbjct: 64 VLPKY 68
>AT3G10585.1 | chr3:3308567-3309429 REVERSE LENGTH=166
Length = 165
Score = 45.1 bits (105), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 12 PQWTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYD-LLVEDVKRIETGK 70
P WT +++FE AL ++ +P IA + K +EVK YYD +LV DV IE+GK
Sbjct: 5 PPWTRDNDKRFELALVIFPEGSPYFLEYIAEFLQ-KPLEEVKYYYDAILVYDVVLIESGK 63
Query: 71 VPFPAY 76
P Y
Sbjct: 64 YALPKY 69
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.129 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,791,076
Number of extensions: 60350
Number of successful extensions: 299
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 298
Number of HSP's successfully gapped: 17
Length of query: 85
Length of database: 11,106,569
Length adjustment: 56
Effective length of query: 29
Effective length of database: 9,571,273
Effective search space: 277566917
Effective search space used: 277566917
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 104 (44.7 bits)