Os10g0561400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Transcription factor MYBS3.
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Os10g0561400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Transcription factor MYBS3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.64 | 0.277 | 13.4 | 0.136 | 1.57 | -0.686 | -0.0365 | -1.17 | 0.234 | 5.24 | 19.99 | 338 | -- | -- |
| 36.15 | 0.28 | 13.4 | 0.158 | 1.57 | -0.654 | 0.342 | -- | 0.242 | 5.21 | 20 | 354 | -- | -- |
| 34.64 | 0.274 | 13.4 | 0.136 | 1.57 | -0.687 | -- | -1.15 | 0.234 | 5.24 | 20 | 338 | -- | -- |
| 36.4 | 0.281 | 13.4 | 0.15 | 1.58 | -0.658 | -- | -- | 0.238 | 5.24 | 20 | 338 | -- | -- |
| 88.08 | 0.437 | 13.5 | -0.0723 | -- | -1.58 | -- | -2.39 | 0.133 | -- | -3.468 | 558 | -- | -- |
| 42.39 | 0.305 | 13.4 | 0.128 | 1.85 | -- | 0.404 | -- | 0.187 | 4.96 | -- | -- | -- | -- |
| 42.81 | 0.306 | 13.4 | 0.127 | 1.85 | -- | -- | -- | 0.185 | 4.97 | -- | -- | -- | -- |
| 72.1 | 0.395 | 13.4 | 0.27 | -- | -2.1 | -- | -- | 0.397 | -- | -15.55 | 520 | -- | -- |
| 37.04 | 0.283 | 13.4 | -- | 1.59 | -0.658 | -- | -- | 0.225 | 5.23 | 20 | 338 | -- | -- |
| 223.81 | 0.699 | 13.4 | 0.195 | -- | -- | -- | -- | 0.233 | -- | -- | -- | -- | -- |
| 43.23 | 0.308 | 13.4 | -- | 1.86 | -- | -- | -- | 0.171 | 4.96 | -- | -- | -- | -- |
| 74.02 | 0.401 | 13.4 | -- | -- | -2.1 | -- | -- | 0.366 | -- | -23.01 | 520 | -- | -- |
| 224.81 | 0.7 | 13.4 | -- | -- | -- | -- | -- | 0.211 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.93 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 3 |
| 4 | 27.17 | radiation | 1.0 | 90 | > th | dose independent | rect. | 13 | 5 |
| 5 | 27.20 | temperature | 20.0 | 90 | > th | dose independent | rect. | 13 | 4 |
| 6 | 27.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 2 |
| 14 | 27.62 | temperature | 25.0 | 10 | > th | dose independent | rect. | 14 | 4 |
| 17 | 27.68 | humidity | 90.0 | 30 | < th | dose independent | rect. | 13 | 5 |
| 43 | 27.95 | humidity | 80.0 | 270 | < th | dose independent | rect. | 12 | 3 |
| 73 | 28.38 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 13 | 4 |
| 74 | 28.38 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 13 | 4 |
| 96 | 28.58 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 17 | 20 |
| 97 | 28.58 | radiation | 30.0 | 90 | < th | dose dependent | sin | 14 | NA |
| 100 | 28.61 | wind | 1.0 | 90 | > th | dose independent | rect. | 13 | 4 |
| 101 | 28.61 | temperature | 10.0 | 90 | > th | dose independent | rect. | 13 | 4 |
| 103 | 28.61 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 13 | 4 |
| 105 | 28.61 | temperature | 10.0 | 90 | > th | dose independent | rect. | 17 | 20 |
| 106 | 28.62 | wind | 9.0 | 90 | < th | dose independent | rect. | 13 | 4 |
| 107 | 28.63 | wind | 9.0 | 90 | < th | dose independent | rect. | 17 | 20 |
| 110 | 28.66 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 13 | 4 |
| 132 | 28.71 | radiation | 1.0 | 30 | < th | dose dependent | sin | 16 | NA |
| 146 | 28.73 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 13 | 14 |
| 171 | 28.76 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 3 |
| 185 | 28.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 21 |
| 193 | 28.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 21 |
| 196 | 28.95 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 205 | 29.01 | radiation | 20.0 | 270 | > th | dose independent | rect. | 13 | 2 |
| 213 | 29.06 | wind | 1.0 | 270 | > th | dose dependent | rect. | 12 | 3 |
| 221 | 29.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 14 |
| 222 | 29.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 14 |
| 227 | 29.19 | radiation | 1.0 | 90 | > th | dose dependent | sin | 14 | NA |
| 248 | 29.25 | radiation | 1.0 | 30 | > th | dose independent | sin | 16 | NA |
| 251 | 29.28 | radiation | 10.0 | 90 | > th | dose independent | sin | 14 | NA |
| 252 | 29.28 | radiation | 1.0 | 30 | < th | dose independent | sin | 16 | NA |
| 268 | 29.38 | wind | 1.0 | 10 | > th | dose dependent | rect. | 13 | 5 |
| 309 | 29.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 10 |
| 310 | 29.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 10 |
| 311 | 29.62 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 10 |
| 312 | 29.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 14 |
| 321 | 29.68 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 10 |
| 324 | 29.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 10 |
| 326 | 29.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 10 |
| 328 | 29.71 | radiation | 40.0 | 270 | > th | dose independent | rect. | 12 | 21 |
| 334 | 29.75 | radiation | 40.0 | 270 | > th | dose independent | rect. | 12 | 4 |
| 386 | 29.91 | radiation | 40.0 | 270 | > th | dose independent | rect. | 13 | 1 |
| 394 | 29.93 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 14 |
| 395 | 29.94 | humidity | 50.0 | 90 | > th | dose independent | rect. | 17 | 20 |
| 396 | 29.95 | radiation | 40.0 | 270 | > th | dose independent | sin | 13 | NA |
| 397 | 29.95 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 15 | 10 |
| 401 | 29.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 21 |
| 412 | 30.00 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 17 | 20 |
| 414 | 30.00 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 17 | 20 |
| 423 | 30.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 430 | 30.02 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 437 | 30.05 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 13 | 5 |
| 439 | 30.05 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 13 | 5 |
| 459 | 30.10 | wind | 1.0 | 10 | > th | dose independent | rect. | 13 | 5 |
| 462 | 30.13 | radiation | 40.0 | 270 | < th | dose independent | rect. | 16 | 20 |
| 500 | 30.21 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 3 |
| 508 | 30.24 | wind | 9.0 | 10 | < th | dose independent | rect. | 13 | 5 |
| 523 | 30.26 | temperature | 10.0 | 10 | > th | dose independent | rect. | 13 | 5 |
| 525 | 30.26 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 13 | 5 |
| 527 | 30.26 | temperature | 10.0 | 10 | > th | dose independent | rect. | 18 | 19 |
| 528 | 30.26 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 18 | 19 |
| 575 | 30.37 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 21 |
| 578 | 30.37 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 21 |
| 585 | 30.39 | wind | 9.0 | 10 | < th | dose independent | rect. | 18 | 19 |
| 587 | 30.40 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 20 |
| 609 | 30.44 | radiation | 1.0 | 30 | < th | dose independent | rect. | 15 | 10 |
| 612 | 30.44 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 13 | 4 |
| 616 | 30.45 | radiation | 40.0 | 270 | < th | dose independent | rect. | 8 | 14 |
| 628 | 30.51 | radiation | 40.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 661 | 30.58 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 13 | 5 |
| 678 | 30.64 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 4 |
| 696 | 30.65 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 8 | 14 |
| 826 | 30.86 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 4 |
| 830 | 30.86 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 842 | 30.88 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 17 | 7 |
| 866 | 30.94 | humidity | 50.0 | 90 | > th | dose independent | rect. | 17 | 7 |
| 872 | 30.96 | wind | 1.0 | 90 | > th | dose independent | rect. | 17 | 20 |
| 934 | 31.08 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 2 |
| 947 | 31.10 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 18 | 19 |
| 948 | 31.10 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 18 | 19 |
| 967 | 31.14 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 24 | 17 |