Os01g0192300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to I-box binding factor (Fragment).
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Os01g0192300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to I-box binding factor (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.07 | 0.446 | 10.3 | -0.354 | 0.0746 | 1.17 | -1.43 | -3.67 | 0.574 | 1.36 | 20.92 | 6064 | -- | -- |
| 96.28 | 0.457 | 10.2 | 0.49 | 0.0346 | 1.5 | -1.44 | -- | 0.734 | 2.23 | 14.81 | 7768 | -- | -- |
| 96.66 | 0.458 | 10.3 | -0.208 | 0.13 | 1.05 | -- | -3.19 | 0.561 | 21.5 | 20.6 | 7186 | -- | -- |
| 103.7 | 0.474 | 10.2 | 0.582 | 0.0614 | 1.45 | -- | -- | 0.755 | 23.4 | 14.93 | 7747 | -- | -- |
| 97.4 | 0.46 | 10.3 | -0.277 | -- | 1.09 | -- | -3.44 | 0.553 | -- | 20.44 | 7004 | -- | -- |
| 135.57 | 0.546 | 10.1 | 1.32 | 0.0879 | -- | -1.31 | -- | 1.19 | 1.21 | -- | -- | -- | -- |
| 141.95 | 0.558 | 10.1 | 1.36 | 0.144 | -- | -- | -- | 1.2 | 21.6 | -- | -- | -- | -- |
| 103.81 | 0.475 | 10.2 | 0.57 | -- | 1.56 | -- | -- | 0.767 | -- | 9.721 | 7809 | -- | -- |
| 108.81 | 0.486 | 10.2 | -- | 0.0521 | 1.78 | -- | -- | 0.607 | 0.0568 | 12.61 | 10753 | -- | -- |
| 143.18 | 0.559 | 10.1 | 1.36 | -- | -- | -- | -- | 1.2 | -- | -- | -- | -- | -- |
| 190.97 | 0.646 | 10.1 | -- | 0.149 | -- | -- | -- | 1.05 | 22.2 | -- | -- | -- | -- |
| 108.87 | 0.486 | 10.2 | -- | -- | 1.79 | -- | -- | 0.599 | -- | 10.04 | 10777 | -- | -- |
| 192.32 | 0.647 | 10.1 | -- | -- | -- | -- | -- | 1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.30 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 4 | 88.99 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 8 | 89.11 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 59 | 90.54 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 6 |
| 66 | 90.66 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 7 | 6 |
| 100 | 91.02 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 6 | NA |
| 104 | 91.07 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 137 | 91.31 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 173 | 91.51 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 183 | 91.57 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 189 | 91.61 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 206 | 91.68 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 22 | 4 |
| 207 | 91.68 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 211 | 91.69 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 240 | 91.75 | temperature | 25.0 | 4320 | > th | dose independent | sin | 1 | NA |
| 254 | 91.78 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 287 | 91.85 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 329 | 91.93 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 8 |
| 354 | 91.99 | temperature | 25.0 | 4320 | < th | dose independent | sin | 1 | NA |
| 537 | 92.31 | temperature | 20.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 538 | 92.31 | temperature | 20.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 788 | 92.72 | temperature | 20.0 | 4320 | > th | dose dependent | no | NA | NA |
| 868 | 92.86 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 880 | 92.88 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 892 | 92.89 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 895 | 92.90 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 897 | 92.90 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 901 | 92.90 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 914 | 92.92 | wind | 3.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 921 | 92.93 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 924 | 92.93 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 940 | 92.96 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 945 | 92.97 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 982 | 93.02 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 1000 | 93.04 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 6 |