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Os01g0863300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to MCB2 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0304) R2 : 0.705
β1 : 0.825 (0.111) R2dD : 0.0368 R2D : 0.0112
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.75 (0.0546) R2dE : 0.666 R2E : 0.656
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.323 (0.0649) R2dN8 : 0.0216 R2N8 : 0.0133
σ : 0.569
deviance : 149.07
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_____
C
peak time of C : --
E
wheather : wind
threshold : 5.9
memory length : 28
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 20
open length of G : 10.2

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
145.64 0.567 10.5 0.791 0.209 -1.63 0.821 0.114 0.327 11.5 5.828 29 20 10.2
145.51 0.566 10.5 0.78 0.221 -1.62 0.75 -- 0.326 11.5 5.828 29 20 10.2
146.5 0.568 10.5 0.805 0.313 -1.54 -- -0.425 0.333 12.6 5.828 29 20 10.2
147.65 0.566 10.5 0.823 0.29 -1.56 -- -- 0.334 12.7 5.892 28 20 10.2
148.22 0.57 10.5 0.806 -- -1.74 -- -0.411 0.322 -- 5.828 29 20 10.2
199.73 0.663 10.5 0.778 2.16 -- 0.704 -- 0.414 13.7 -- -- -- --
201.68 0.665 10.5 0.801 2.16 -- -- -- 0.418 13.8 -- -- -- --
149.07 0.569 10.5 0.825 -- -1.75 -- -- 0.323 -- 5.9 28 20 10.2
165.02 0.602 10.6 -- 0.311 -1.53 -- -- 0.245 12.7 5.892 28 20 10.2
485.05 1.03 10.5 0.712 -- -- -- -- 0.37 -- -- -- -- --
218.57 0.692 10.5 -- 2.15 -- -- -- 0.329 13.7 -- -- -- --
166.67 0.603 10.6 -- -- -1.73 -- -- 0.234 -- 5.9 28 20 10.2
498.44 1.04 10.5 -- -- -- -- -- 0.291 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 147.26 wind 5.0 30 < th dose independent rect. 20 10
7 152.33 wind 9.0 30 < th dose dependent rect. 20 10
9 155.70 precipitation 0.1 30 < th dose independent rect. 20 10
10 155.70 precipitation 0.1 30 < th dose dependent rect. 20 10
13 156.75 temperature 15.0 30 > th dose independent rect. 20 10
14 156.79 radiation 10.0 30 < th dose independent rect. 20 10
16 156.98 temperature 10.0 1440 > th dose independent rect. 21 10
19 156.98 temperature 30.0 1440 < th dose independent rect. 21 10
23 156.98 humidity 50.0 1440 > th dose independent rect. 21 10
28 156.98 atmosphere 995.0 1440 > th dose independent rect. 21 10
29 156.98 radiation 40.0 1440 < th dose independent rect. 21 10
33 156.98 temperature 10.0 1440 > th dose independent rect. 7 14
36 157.27 radiation 40.0 30 < th dose dependent rect. 20 10
39 157.48 temperature 30.0 30 < th dose independent rect. 20 10
40 157.48 humidity 50.0 30 > th dose independent rect. 20 10
43 157.48 atmosphere 995.0 30 > th dose independent rect. 20 10
47 157.48 temperature 10.0 30 > th dose independent rect. 6 14
49 157.48 atmosphere 1015.0 30 < th dose independent rect. 6 14
83 159.68 wind 9.0 30 < th dose independent rect. 6 14
95 159.84 atmosphere 1010.0 30 < th dose independent rect. 20 10
100 160.63 precipitation 0.1 30 < th dose independent rect. 6 14
101 160.63 precipitation 0.1 30 < th dose dependent rect. 6 14
107 161.30 atmosphere 995.0 30 > th dose independent rect. 6 14
115 161.78 radiation 10.0 90 < th dose dependent rect. 20 17
119 162.00 humidity 50.0 30 > th dose dependent rect. 20 10
132 163.37 temperature 10.0 30 > th dose dependent rect. 20 10
135 163.56 radiation 1.0 90 < th dose independent rect. 20 17
138 163.70 radiation 1.0 90 < th dose independent rect. 20 15
149 164.17 radiation 1.0 90 < th dose independent rect. 20 21
156 164.94 atmosphere 1015.0 30 < th dose dependent rect. 20 10
161 165.20 wind 9.0 30 < th dose dependent rect. 6 14
180 166.53 wind 1.0 10 > th dose independent rect. 6 14
196 167.09 wind 7.0 270 < th dose independent rect. 8 22
278 168.91 radiation 10.0 90 < th dose dependent sin 9 NA
283 169.14 wind 7.0 90 < th dose independent rect. 11 19
296 169.72 wind 7.0 270 < th dose independent rect. 9 19
333 171.15 precipitation 0.1 30 < th dose independent rect. 11 19
335 171.15 precipitation 0.1 30 < th dose dependent rect. 11 19
352 171.60 wind 3.0 270 < th dose independent rect. 6 1
363 171.80 wind 5.0 90 < th dose dependent rect. 6 5
388 172.27 atmosphere 995.0 30 > th dose dependent rect. 6 14
389 172.31 wind 3.0 90 < th dose independent rect. 6 5
390 172.31 humidity 50.0 30 > th dose independent rect. 6 14
409 172.45 humidity 90.0 10 < th dose independent rect. 6 5
415 172.60 radiation 1.0 90 > th dose independent sin 8 NA
417 172.62 temperature 10.0 270 > th dose dependent rect. 6 1
430 172.86 wind 7.0 270 < th dose dependent rect. 6 1
431 172.93 radiation 1.0 90 > th dose independent rect. 4 7
445 172.97 atmosphere 1000.0 30 > th dose independent rect. 6 21
447 173.01 radiation 1.0 90 < th dose independent sin 8 NA
450 173.06 wind 7.0 270 > th dose dependent rect. 17 9
459 173.18 humidity 80.0 270 > th dose independent rect. 6 1
461 173.23 wind 7.0 270 > th dose dependent rect. 17 6
467 173.32 radiation 40.0 720 < th dose dependent rect. 14 3
472 173.41 temperature 15.0 30 > th dose independent rect. 11 19
491 173.63 wind 5.0 10 < th dose independent rect. 6 5
492 173.65 radiation 1.0 270 > th dose independent rect. 6 1
500 173.72 precipitation 0.1 270 < th dose independent rect. 7 23
501 173.72 precipitation 0.1 270 < th dose dependent rect. 7 23
504 173.77 radiation 20.0 270 < th dose independent rect. 6 1
505 173.77 wind 9.0 30 < th dose dependent rect. 11 19
507 173.82 radiation 20.0 720 < th dose independent rect. 14 3
510 173.87 temperature 20.0 10 > th dose independent rect. 6 5
515 173.91 precipitation 0.1 270 < th dose independent rect. 6 1
516 173.91 precipitation 0.1 270 < th dose dependent rect. 6 1
520 173.93 temperature 10.0 270 > th dose independent rect. 6 1
522 173.93 temperature 30.0 270 < th dose independent rect. 6 1
523 173.93 humidity 50.0 270 > th dose independent rect. 6 1
525 173.93 atmosphere 995.0 270 > th dose independent rect. 6 1
526 173.93 atmosphere 1015.0 270 < th dose independent rect. 6 1
527 173.93 radiation 40.0 270 < th dose independent rect. 6 1
528 173.93 temperature 10.0 270 > th dose independent rect. 7 23
535 173.98 wind 9.0 270 > th dose dependent rect. 17 17
541 174.01 humidity 50.0 10 > th dose independent rect. 11 19
542 174.01 radiation 40.0 720 < th dose dependent rect. 14 11
543 174.03 atmosphere 1015.0 30 < th dose independent rect. 11 19
548 174.08 temperature 30.0 30 < th dose independent rect. 6 5
554 174.12 humidity 50.0 270 > th dose dependent rect. 6 1
564 174.13 temperature 10.0 1440 > th dose independent rect. 7 5
567 174.13 atmosphere 995.0 1440 > th dose independent rect. 7 5
568 174.13 temperature 10.0 1440 > th dose independent rect. 12 19
582 174.18 radiation 30.0 720 < th dose independent rect. 14 11
586 174.18 temperature 10.0 10 > th dose dependent rect. 6 5
589 174.19 precipitation 0.1 30 < th dose independent rect. 6 5
590 174.19 precipitation 0.1 30 < th dose dependent rect. 6 5
599 174.25 temperature 10.0 30 > th dose independent rect. 6 5
601 174.25 humidity 50.0 30 > th dose independent rect. 6 5
602 174.25 atmosphere 995.0 30 > th dose independent rect. 6 5
603 174.25 atmosphere 1015.0 30 < th dose independent rect. 6 5
608 174.29 wind 9.0 720 < th dose independent rect. 9 14
631 174.49 radiation 40.0 90 < th dose independent rect. 6 5
636 174.54 wind 9.0 270 > th dose independent rect. 17 17
688 174.78 wind 7.0 90 > th dose independent rect. 18 9
691 174.80 wind 9.0 270 > th dose independent rect. 17 6
706 174.89 wind 9.0 720 < th dose independent rect. 11 10
712 174.89 radiation 40.0 270 < th dose dependent rect. 6 1
758 175.14 wind 9.0 270 > th dose dependent sin 11 NA
781 175.30 wind 9.0 30 > th dose independent sin 11 NA
811 175.46 radiation 1.0 270 > th dose independent rect. 4 4
842 175.52 wind 9.0 720 < th dose independent rect. 3 18
844 175.53 wind 1.0 10 > th dose independent rect. 6 5
857 175.59 temperature 10.0 30 > th dose dependent rect. 11 19
875 175.63 atmosphere 1000.0 270 > th dose independent rect. 15 18
876 175.64 atmosphere 1000.0 270 > th dose independent rect. 15 9
878 175.65 radiation 40.0 90 < th dose independent rect. 6 14
881 175.67 atmosphere 995.0 30 > th dose independent rect. 11 19
882 175.68 temperature 10.0 270 > th dose dependent rect. 5 3
915 175.90 wind 9.0 270 > th dose independent sin 11 NA
926 175.92 wind 9.0 30 < th dose dependent rect. 14 16
927 175.93 atmosphere 1000.0 90 > th dose independent rect. 17 18
942 175.97 humidity 50.0 30 > th dose dependent rect. 6 5
952 176.02 wind 9.0 720 < th dose independent rect. 7 15
958 176.07 atmosphere 995.0 270 > th dose dependent rect. 6 1
989 176.12 atmosphere 1015.0 30 < th dose dependent rect. 11 19