BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0863300 Os01g0863300|AK111571
(148 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0863300 Similar to MCB2 protein 288 1e-78
Os05g0442400 Similar to MybSt1 204 2e-53
Os01g0853700 Similar to MCB1 protein 139 1e-33
Os05g0449900 Homeodomain-like containing protein 135 8e-33
Os01g0142500 Homeodomain-like containing protein 128 2e-30
Os04g0676700 Similar to MCB1 protein 117 2e-27
Os05g0442200 115 1e-26
Os01g0524500 Similar to Transcription factor MYBS3 109 8e-25
Os05g0195700 Similar to Transcription factor MYBS2 103 6e-23
Os04g0341900 102 1e-22
Os01g0603300 Similar to MCB2 protein 101 2e-22
Os01g0192300 Similar to I-box binding factor (Fragment) 100 3e-22
Os05g0589400 Similar to I-box binding factor (Fragment) 97 5e-21
Os01g0187900 Similar to Transcription factor MYBS2 96 1e-20
Os10g0562100 Homeodomain-like containing protein 94 3e-20
AK105558 92 2e-19
Os10g0561400 Similar to Transcription factor MYBS3 91 2e-19
Os08g0151000 Similar to MCB1 protein 91 2e-19
Os08g0144000 Zinc finger, CCHC-type domain containing protein 89 9e-19
Os06g0173400 77 4e-15
Os06g0173300 77 5e-15
Os05g0442100 75 1e-14
Os06g0173200 75 2e-14
Os02g0511200 73 6e-14
Os03g0837200 71 3e-13
Os06g0173800 69 1e-12
Os06g0174100 66 1e-11
>Os01g0863300 Similar to MCB2 protein
Length = 148
Score = 288 bits (736), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/148 (95%), Positives = 141/148 (95%)
Query: 1 MDLYXXXXXXXPVARRPWSKVEDKVFESALVLCPEDVPDRWALVAAQLPGRTPQEALEHY 60
MDLY PVARRPWSKVEDKVFESALVLCPEDVPDRWALVAAQLPGRTPQEALEHY
Sbjct: 1 MDLYGAAAGGGPVARRPWSKVEDKVFESALVLCPEDVPDRWALVAAQLPGRTPQEALEHY 60
Query: 61 QVLVADIDLIMRGAERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVAS 120
QVLVADIDLIMRGAERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVAS
Sbjct: 61 QVLVADIDLIMRGAERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVAS 120
Query: 121 HAQKYFIRQANAGARDSKRKSIHDITTP 148
HAQKYFIRQANAGARDSKRKSIHDITTP
Sbjct: 121 HAQKYFIRQANAGARDSKRKSIHDITTP 148
>Os05g0442400 Similar to MybSt1
Length = 182
Score = 204 bits (518), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/159 (66%), Positives = 119/159 (74%), Gaps = 24/159 (15%)
Query: 14 ARRPWSKVEDKVFESALVLCPEDVPDRWALVAAQLPGRTPQEALEHYQVLVADIDLIMRG 73
+ RPWSK EDKVFESALV PE +RWALVA++LPGR+ E EHYQVLV D+DLI RG
Sbjct: 24 SSRPWSKAEDKVFESALVAFPEHTHNRWALVASRLPGRSAHEVWEHYQVLVDDVDLIERG 83
Query: 74 A-----------------------ERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSV 110
ERRRGVPW+E+EHRLFLEGL++YGRGDWRNISR+SV
Sbjct: 84 MVASPGCWDDDNNSAGHGRGSGGDERRRGVPWTEEEHRLFLEGLEKYGRGDWRNISRWSV 143
Query: 111 RTRTPTQVASHAQKYFIRQANAGAR-DSKRKSIHDITTP 148
+TRTPTQVASHAQK+FIRQANA +R DSKRKSIHDIT P
Sbjct: 144 KTRTPTQVASHAQKFFIRQANASSRGDSKRKSIHDITAP 182
>Os01g0853700 Similar to MCB1 protein
Length = 299
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 96/173 (55%), Gaps = 44/173 (25%)
Query: 18 WSKVEDKVFESALVLCPEDVPDRWALVAAQLPGRTPQEALEHYQVLVADIDLIMRG---- 73
WS E+KVFE AL D P+RW +VAA LP +T + + HY+ L D+ I G
Sbjct: 32 WSAEENKVFERALAQVDLDSPNRWEMVAAMLPRKTVIDVMNHYRDLENDVGSIEAGLVPF 91
Query: 74 ---------------------------------------AERRRGVPWSEDEHRLFLEGL 94
ER++GVPW+E+EH+ FL GL
Sbjct: 92 PHYSSSLSPASSGFTLQDWDGSDGGFRRGCYLKRGRAPDQERKKGVPWTEEEHKSFLMGL 151
Query: 95 DRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGARDSKRKSIHDITT 147
+YGRGDWRNISR+ V +RTPTQVASHAQKYFIR N+G +D +R SIHDITT
Sbjct: 152 KKYGRGDWRNISRYFVTSRTPTQVASHAQKYFIR-LNSGGKDKRRSSIHDITT 203
>Os05g0449900 Homeodomain-like containing protein
Length = 315
Score = 135 bits (341), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 95/179 (53%), Gaps = 50/179 (27%)
Query: 18 WSKVEDKVFESALVLCPEDVPDRWALVAAQLPGRTPQEALEHYQVLVADIDLIMRG---- 73
WS+ E+KVFE AL + P+RW VA LPG+T + + HY L D+ I G
Sbjct: 40 WSQEENKVFEQALAALDRNDPERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPF 99
Query: 74 ---------------------------------------------AERRRGVPWSEDEHR 88
ER++GVPW+E+EH+
Sbjct: 100 PHYGAAGGGGGSGFTLDWDGGDDPAGLGFKRSCYMVGGKRARGPDQERKKGVPWTEEEHK 159
Query: 89 LFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGARDSKRKSIHDITT 147
LFL GL +YGRGDWRNISR V +RTPTQVASHAQKYFIR N+G +D +R SIHDITT
Sbjct: 160 LFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIR-LNSGGKDKRRSSIHDITT 217
>Os01g0142500 Homeodomain-like containing protein
Length = 294
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 94/182 (51%), Gaps = 52/182 (28%)
Query: 16 RPWSKVEDKVFESALVLCPEDVPDRWALVAAQLPGRTPQEALEHYQVLVADIDLIMRGA- 74
R WS E+K FE AL PD W VA +PGR+ E + H++ L D+ I G
Sbjct: 27 RKWSPEENKQFERALAGLDLRCPD-WDRVARAIPGRSALEVMNHFRDLELDVQQIENGMV 85
Query: 75 -------------------------------------------------ERRRGVPWSED 85
ER++GVPW+E+
Sbjct: 86 PFPVYGAAAAGGAFTLQWDGAHGVGDFRNAYRFGGGGGGKRHFGRTPEQERKKGVPWTEE 145
Query: 86 EHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGARDSKRKSIHDI 145
EH+LFL GL +YG+GDWRNISR V+TRTPTQVASHAQKYFIR N+G +D +R SIHDI
Sbjct: 146 EHKLFLLGLKKYGKGDWRNISRNFVQTRTPTQVASHAQKYFIR-LNSGGKDKRRSSIHDI 204
Query: 146 TT 147
TT
Sbjct: 205 TT 206
>Os04g0676700 Similar to MCB1 protein
Length = 318
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 94/179 (52%), Gaps = 50/179 (27%)
Query: 18 WSKVEDKVFESALVLCPEDVPDR---WALVAAQLPGRTPQEALEHYQVLVADIDLIMRG- 73
W++ +K FE+AL +D + W +A + G+T E HY++LV D+D I G
Sbjct: 33 WTREREKAFENALATVGDDEEEGDGLWEKLAEAVEGKTADEVRRHYELLVEDVDGIEAGR 92
Query: 74 ---------------------------------------------AERRRGVPWSEDEHR 88
ERR+G+ W+EDEHR
Sbjct: 93 VPLLVYAGDGGVEEGSAGGGKKGGGGGGGGGGGGHGEKGSAKSSEQERRKGIAWTEDEHR 152
Query: 89 LFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGARDSKRKSIHDITT 147
LFL GL++YG+GDWR+ISR V +RTPTQVASHAQKYFIR N+ R+ +R SIHDIT+
Sbjct: 153 LFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKYFIR-LNSMNRERRRSSIHDITS 210
>Os05g0442200
Length = 133
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 73/112 (65%), Gaps = 24/112 (21%)
Query: 14 ARRPWSKVEDKVFESALVLCPEDVPDRWALVAAQLPGRTPQEALEHYQVLVADIDLIMRG 73
+ RPWSK EDKVFESALV PE +RWA+VA++LPGR+ E EHY+VLV D+DLI RG
Sbjct: 22 SSRPWSKAEDKVFESALVAFPEHTHNRWAIVASRLPGRSAHEVWEHYRVLVDDVDLIERG 81
Query: 74 A------------------------ERRRGVPWSEDEHRLFLEGLDRYGRGD 101
ERRRGVPW+E+EHRLFLEGL++Y RGD
Sbjct: 82 MVASPGCWDDGAGRGGAQGASRGGDERRRGVPWTEEEHRLFLEGLEKYRRGD 133
>Os01g0524500 Similar to Transcription factor MYBS3
Length = 284
Score = 109 bits (272), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 63/73 (86%), Gaps = 1/73 (1%)
Query: 75 ERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGA 134
ERR+G+PW+E+EHRLFL GLD++G+GDWR+ISR V +RTPTQVASHAQKYFIR N+
Sbjct: 115 ERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIR-LNSMN 173
Query: 135 RDSKRKSIHDITT 147
RD +R SIHDIT+
Sbjct: 174 RDRRRSSIHDITS 186
>Os05g0195700 Similar to Transcription factor MYBS2
Length = 287
Score = 103 bits (256), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Query: 69 LIMRGAERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIR 128
L+ R ER++GVPW+E+EH++FL GLD+ G+GDWR ISR V TRTPTQVASHAQKYF+R
Sbjct: 112 LMGRVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLR 171
Query: 129 QANAGARDSKRKSIHDI 145
Q N+ + +R S+ D+
Sbjct: 172 Q-NSMTQKKRRSSLFDV 187
>Os04g0341900
Length = 201
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 75 ERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGA 134
ERR+G+PW+E+EHRLFL GLD++G+GD +ISR V +RTPTQVASHAQKYFIR N+
Sbjct: 101 ERRKGIPWTEEEHRLFLLGLDKFGKGDLHSISRNFVISRTPTQVASHAQKYFIR-LNSMN 159
Query: 135 RDSKRKSIHDITT 147
RD +R SIHDIT+
Sbjct: 160 RDRRRSSIHDITS 172
>Os01g0603300 Similar to MCB2 protein
Length = 301
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Query: 75 ERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGA 134
ER++GVPWSE+EHRLFL GL++ G+GDWR ISR V TRTPTQVASHAQK+F+RQ++ G
Sbjct: 128 ERKKGVPWSEEEHRLFLVGLEKLGKGDWRGISRSYVTTRTPTQVASHAQKFFLRQSSIG- 186
Query: 135 RDSKRKSIHDI 145
+ +R S+ D+
Sbjct: 187 KKKRRSSLFDM 197
>Os01g0192300 Similar to I-box binding factor (Fragment)
Length = 310
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Query: 69 LIMRGAERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIR 128
L+ R ER++GVPW+E+EHR FL GL++ G+GDWR ISR V TRTPTQVASHAQKYF+R
Sbjct: 113 LMARAQERKKGVPWTEEEHRKFLVGLEKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLR 172
Query: 129 QANAGARDSKRKSIHDI 145
Q++ + +R S+ D+
Sbjct: 173 QSSL-TQKKRRSSLFDV 188
>Os05g0589400 Similar to I-box binding factor (Fragment)
Length = 270
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 75 ERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGA 134
ER++GVPWSE EHRLFL GL++ G+GDWR ISR V TRTPTQVASHAQK+F+R +A
Sbjct: 114 ERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAAK 173
Query: 135 R--DSKRKSIHDI 145
+ + +R S+ D+
Sbjct: 174 KTNNKRRSSLFDM 186
>Os01g0187900 Similar to Transcription factor MYBS2
Length = 366
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 48/58 (82%)
Query: 74 AERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQAN 131
ER++G PW+E+EHR+FL GL + G+GDWR ISR V +RTPTQVASHAQKYFIRQ N
Sbjct: 102 GERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTN 159
>Os10g0562100 Homeodomain-like containing protein
Length = 265
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 75 ERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGA 134
ER++GVPW+E+EH+ FLEGL + G+GDWR IS+ V +RT TQVASHAQKYF+RQ N G
Sbjct: 94 ERKKGVPWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKYFLRQTNPG- 152
Query: 135 RDSKRKSIHDI 145
+ +R S+ D+
Sbjct: 153 KKKRRASLFDV 163
>AK105558
Length = 90
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 79 GVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGARDSK 138
GVPW+E+EHR FL GL + G+GDWR ISR V +RTPTQVASHAQKYFIRQ+N R +
Sbjct: 10 GVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNM-TRRKR 68
Query: 139 RKSIHDIT 146
R S+ D+
Sbjct: 69 RSSLFDMV 76
>Os10g0561400 Similar to Transcription factor MYBS3
Length = 234
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 79 GVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGARDSK 138
GVPW+E+EHR FL GL + G+GDWR ISR V +RTPTQVASHAQKYFIRQ+N R +
Sbjct: 9 GVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNM-TRRKR 67
Query: 139 RKSIHDI 145
R S+ D+
Sbjct: 68 RSSLFDM 74
>Os08g0151000 Similar to MCB1 protein
Length = 295
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 79 GVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGARDSK 138
VPW+E+EHR FL GL++ G+GDWR IS+ V TRTPTQVASHAQKYF+RQ N + +
Sbjct: 7 AVPWTEEEHRTFLAGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQTNPN-KKKR 65
Query: 139 RKSIHDI 145
R S+ D+
Sbjct: 66 RSSLFDM 72
>Os08g0144000 Zinc finger, CCHC-type domain containing protein
Length = 383
Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 76 RRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGAR 135
R+RG WSE+EH+ FL GL + G+GDWR ISR V +RTPTQVASHAQKYFIRQ N R
Sbjct: 99 RKRGEAWSEEEHKKFLLGLSKLGKGDWRGISRNYVGSRTPTQVASHAQKYFIRQTNV-HR 157
Query: 136 DSKRKSIHDI 145
+R S+ D+
Sbjct: 158 RKRRSSLFDM 167
>Os06g0173400
Length = 331
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 8/87 (9%)
Query: 66 DIDLIMRGAERRRGVP-------WSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQV 118
D ++ +G R R P W+ +EHR FL GL YGRG+W++IS VR++TP QV
Sbjct: 100 DDEVNNQGGRRHRAAPTNTTRRFWTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQV 159
Query: 119 ASHAQKYFIRQANAGARDSKRKSIHDI 145
+SHAQKYF R+ + A D +R SI+D+
Sbjct: 160 SSHAQKYF-RRVESAAADKQRYSINDV 185
>Os06g0173300
Length = 394
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 8/87 (9%)
Query: 66 DIDLIMRGAERRRGVP-------WSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQV 118
D ++ +G R R P W+ +EHR FL GL YGRG+W++IS VR++TP QV
Sbjct: 163 DDEVNNQGGGRHRAAPTNTTRRFWTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQV 222
Query: 119 ASHAQKYFIRQANAGARDSKRKSIHDI 145
+SHAQKYF R+ + A D +R SI+D+
Sbjct: 223 SSHAQKYF-RRVESAAADKQRYSINDV 248
>Os05g0442100
Length = 132
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 47/71 (66%)
Query: 14 ARRPWSKVEDKVFESALVLCPEDVPDRWALVAAQLPGRTPQEALEHYQVLVADIDLIMRG 73
+ R WSKVEDKVFESALV E +RW LVA++LPGR Q+ EHYQVL+ D++LI G
Sbjct: 20 SSRLWSKVEDKVFESALVAFSEHTHNRWVLVASRLPGRLAQDVWEHYQVLMDDVNLIEHG 79
Query: 74 AERRRGVPWSE 84
G W +
Sbjct: 80 MIASPGYSWKK 90
>Os06g0173200
Length = 321
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 77 RRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAG 133
+R V W+E+EHRLF+ GL +GRGDW+NIS+ V TRT QV+SHAQK+F++ G
Sbjct: 173 KRRVIWTEEEHRLFMVGLRVFGRGDWKNISKHLVTTRTAAQVSSHAQKFFLKMEARG 229
>Os02g0511200
Length = 276
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 73 GAERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANA 132
G R++ W+ +EH FL G+ YG+G+W+ ++ V+T++ TQ+ASH QK+ IR+
Sbjct: 167 GGPRKKAEMWTREEHSQFLHGISTYGKGNWKALASEFVKTKSSTQIASHYQKFCIREEKR 226
Query: 133 GARDSKRKSIHDITTP 148
KR SIHDI +P
Sbjct: 227 RLSKCKRASIHDIVSP 242
>Os03g0837200
Length = 212
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 75 ERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGA 134
E++ G+ WSE+EHR L G++ G G W IS V +RTP Q+ASH QKYF+R A
Sbjct: 125 EKKSGI-WSEEEHRQCLRGIEEIGHGRWTQISIEYVPSRTPIQIASHTQKYFLRMAKP-K 182
Query: 135 RDSKRKSIHD 144
D KRKSIHD
Sbjct: 183 EDRKRKSIHD 192
>Os06g0173800
Length = 298
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 80 VPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYF 126
V W++ EHRLFL G+ YGRGDWRNISR+ VR++TP Q++ +A YF
Sbjct: 132 VLWTDYEHRLFLTGMRVYGRGDWRNISRYFVRSKTPEQISMYADNYF 178
>Os06g0174100
Length = 362
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 80 VPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYF 126
V W++ EHRLFL G+ YGRGDWRNI+R+ V ++TP QV+ +A YF
Sbjct: 176 VLWTDYEHRLFLTGMRVYGRGDWRNIARYFVGSKTPEQVSMYADNYF 222
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,010,311
Number of extensions: 202107
Number of successful extensions: 847
Number of sequences better than 1.0e-10: 27
Number of HSP's gapped: 848
Number of HSP's successfully gapped: 27
Length of query: 148
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 56
Effective length of database: 12,232,113
Effective search space: 684998328
Effective search space used: 684998328
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 151 (62.8 bits)