BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0566500 Os04g0566500|AK111996
(322 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0566500 Similar to Argonaute protein 673 0.0
Os02g0672200 Similar to AGO1 homologous protein 631 0.0
Os02g0831600 AGO1 homologous protein 570 e-163
Os06g0729300 Similar to AGO1 homologous protein 555 e-158
Os03g0682200 Similar to Argonaute-like protein (Fragment) 471 e-133
Os07g0188000 Similar to Argonaute 4 protein 415 e-116
Os03g0682600 Similar to Argonaute 4 protein 412 e-115
Os02g0169400 Similar to Argonaute 4 protein 374 e-104
Os07g0471300 Similar to Argonaute 4 protein 343 1e-94
Os03g0449200 Stem cell self-renewal protein Piwi domain con... 323 1e-88
Os04g0151800 Argonaute and Dicer protein, PAZ domain contai... 271 4e-73
Os01g0275600 Similar to Argonaute 4 protein 271 6e-73
Os04g0615700 Argonaute and Dicer protein, PAZ domain contai... 253 1e-67
Os04g0615800 Stem cell self-renewal protein Piwi domain con... 232 3e-61
Os01g0275200 Argonaute and Dicer protein, PAZ domain contai... 228 3e-60
Os07g0265600 Stem cell self-renewal protein Piwi domain con... 228 6e-60
Os02g0616400 Stem cell self-renewal protein Piwi domain con... 127 1e-29
Os02g0616300 Stem cell self-renewal protein Piwi domain con... 101 7e-22
Os03g0800200 Stem cell self-renewal protein Piwi domain con... 76 4e-14
>Os04g0566500 Similar to Argonaute protein
Length = 322
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/322 (100%), Positives = 322/322 (100%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV
Sbjct: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD
Sbjct: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
Query: 121 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRS 180
GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRS
Sbjct: 121 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRS 180
Query: 181 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLC 240
GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLC
Sbjct: 181 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLC 240
Query: 241 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVA 300
YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVA
Sbjct: 241 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVA 300
Query: 301 GNVAVRPLPALKENVKRVMFYC 322
GNVAVRPLPALKENVKRVMFYC
Sbjct: 301 GNVAVRPLPALKENVKRVMFYC 322
>Os02g0672200 Similar to AGO1 homologous protein
Length = 1082
Score = 631 bits (1627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/323 (93%), Positives = 309/323 (95%), Gaps = 1/323 (0%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV
Sbjct: 760 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 819
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
TKYAGLVSAQAHRQELIQDLFKVW+DP RGTV+GGMI+ELLISFKRATGQKPQRIIFYRD
Sbjct: 820 TKYAGLVSAQAHRQELIQDLFKVWKDPQRGTVSGGMIRELLISFKRATGQKPQRIIFYRD 879
Query: 121 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRS 180
GVSEGQFYQVL YELDAIRKACASLE +YQPPVTFVVVQKRHHTRLFANNH DQRTVDRS
Sbjct: 880 GVSEGQFYQVLFYELDAIRKACASLEADYQPPVTFVVVQKRHHTRLFANNHKDQRTVDRS 939
Query: 181 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLC 240
GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTAD LQTLTNNLC
Sbjct: 940 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLC 999
Query: 241 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLP-PGVRSARV 299
YTYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSDSGSMASGA T G P PG RS +
Sbjct: 1000 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGAHTRGGGPLPGARSTKP 1059
Query: 300 AGNVAVRPLPALKENVKRVMFYC 322
AGNVAVRPLP LKENVKRVMFYC
Sbjct: 1060 AGNVAVRPLPDLKENVKRVMFYC 1082
>Os02g0831600 AGO1 homologous protein
Length = 1011
Score = 570 bits (1468), Expect = e-163, Method: Compositional matrix adjust.
Identities = 278/324 (85%), Positives = 300/324 (92%), Gaps = 3/324 (0%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
INVKVGGRNTVLVDA++RRIPLV+DRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV
Sbjct: 689 INVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 748
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
TKYAGLVSAQAHRQELI+DL+K+WQDP RGTV+GGMI+ELLISFKR+TG+KPQRIIFYRD
Sbjct: 749 TKYAGLVSAQAHRQELIEDLYKIWQDPQRGTVSGGMIRELLISFKRSTGEKPQRIIFYRD 808
Query: 121 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRS 180
GVSEGQFYQVLLYEL+AIRKACASLE NYQP VTF+VVQKRHHTRLFA+NHNDQ +VDRS
Sbjct: 809 GVSEGQFYQVLLYELNAIRKACASLETNYQPKVTFIVVQKRHHTRLFAHNHNDQNSVDRS 868
Query: 181 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLC 240
GNILPGTVVDSKICHPTEFDFYLCSHAGI+GTSRPAHYHVLWDEN FTAD LQ LTNNLC
Sbjct: 869 GNILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFTADALQILTNNLC 928
Query: 241 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARV- 299
YTYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSDS S+ SG RG G ++R
Sbjct: 929 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSSSVVSGPGV-RGPLSGSSTSRTR 987
Query: 300 -AGNVAVRPLPALKENVKRVMFYC 322
G AV+PLPALK++VKRVMFYC
Sbjct: 988 APGGAAVKPLPALKDSVKRVMFYC 1011
>Os06g0729300 Similar to AGO1 homologous protein
Length = 1038
Score = 555 bits (1431), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/322 (85%), Positives = 294/322 (91%), Gaps = 3/322 (0%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
INVKVGGRNTVLVDA++RRIPLV+DRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV
Sbjct: 720 INVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 779
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
TKYAGLVSAQ+HRQELI DL+ + DPHRG + GGM++ELLISFKR+TGQKPQRIIFYRD
Sbjct: 780 TKYAGLVSAQSHRQELIDDLYNITHDPHRGPICGGMVRELLISFKRSTGQKPQRIIFYRD 839
Query: 121 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRS 180
GVSEGQFYQVLL+ELDAIRKACASLE NYQP VTF+VVQKRHHTRLFA+NHNDQ +VDRS
Sbjct: 840 GVSEGQFYQVLLHELDAIRKACASLEANYQPQVTFIVVQKRHHTRLFAHNHNDQNSVDRS 899
Query: 181 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLC 240
GNILPGTVVDSKICHPTEFDF+LCSHAGI+GTSRPAHYHVLWDEN FTAD LQTLTNNLC
Sbjct: 900 GNILPGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLC 959
Query: 241 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVA 300
YTYARCTRSVSIVPPAYYAHLAAFRARFYME ++SDSGSMASG RS R A
Sbjct: 960 YTYARCTRSVSIVPPAYYAHLAAFRARFYMESDSSDSGSMASGRGGGSST---SRSTRAA 1016
Query: 301 GNVAVRPLPALKENVKRVMFYC 322
G AVRPLPALK++VK VMFYC
Sbjct: 1017 GGGAVRPLPALKDSVKNVMFYC 1038
>Os03g0682200 Similar to Argonaute-like protein (Fragment)
Length = 935
Score = 471 bits (1211), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/322 (70%), Positives = 260/322 (80%), Gaps = 16/322 (4%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
+NVKVGGRNTVL DAL ++IP+++DRPTI+FGADVTHP PGED+SPSIAAVVAS DWPEV
Sbjct: 630 MNVKVGGRNTVLEDALHKKIPILTDRPTIVFGADVTHPSPGEDASPSIAAVVASMDWPEV 689
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
TKY LVS Q+HR+E+I +L+ +DP +G + GGMI+ELL SF + TGQKP RIIFYRD
Sbjct: 690 TKYKCLVSTQSHREEIISNLYTEVKDPLKGIIRGGMIRELLRSFYQETGQKPSRIIFYRD 749
Query: 121 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRS 180
G+SEGQF QVLLYE+DAIRKACASL+ Y PPVTFVVVQKRHHTRLF N D +DRS
Sbjct: 750 GISEGQFSQVLLYEMDAIRKACASLQEGYLPPVTFVVVQKRHHTRLFPENRRD--MMDRS 807
Query: 181 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLC 240
GNILPGTVVD+ ICHP+EFDFYLCSH+GI+GTSRP HYHVL DEN F AD LQTLT NL
Sbjct: 808 GNILPGTVVDTMICHPSEFDFYLCSHSGIKGTSRPTHYHVLLDENGFKADTLQTLTYNLS 867
Query: 241 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVA 300
YTYARCTR+VSIVPPAYYAHL AFRAR+YME E SD GS S + T+R
Sbjct: 868 YTYARCTRAVSIVPPAYYAHLGAFRARYYMEDEHSDQGS--SSSVTTR------------ 913
Query: 301 GNVAVRPLPALKENVKRVMFYC 322
+ + +PLP +KENVKR MFYC
Sbjct: 914 TDRSTKPLPEIKENVKRFMFYC 935
>Os07g0188000 Similar to Argonaute 4 protein
Length = 1052
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/339 (63%), Positives = 246/339 (72%), Gaps = 31/339 (9%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
INVK GGRN+VL L +P + TIIFGADVTHP GEDSS SIAAVVAS DWPE+
Sbjct: 728 INVKAGGRNSVLQRPL---VPGGLENTTIIFGADVTHPASGEDSSASIAAVVASMDWPEI 784
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQ-------------DPHRGTVTGGMIKELLISF-KR 106
TKY LVSAQ RQE+IQDLF + + + + GGM +ELL+SF +
Sbjct: 785 TKYKALVSAQPPRQEIIQDLFTMTEVAQNADAPAQKAEGSKKNFICGGMFRELLMSFYSK 844
Query: 107 ATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRL 166
+KPQRIIFYRDGVS+GQF VLLYE+DAI+KA ASL+P Y+P VTFVVVQKRHHTRL
Sbjct: 845 NAKRKPQRIIFYRDGVSDGQFLHVLLYEMDAIKKAIASLDPAYRPLVTFVVVQKRHHTRL 904
Query: 167 FANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENK 226
F H Q DRSGN+ PGTVVD+ ICHP+EFDFYLCSHAGIQGTSRP HYHVL DEN+
Sbjct: 905 FPEVHGRQDLTDRSGNVRPGTVVDTNICHPSEFDFYLCSHAGIQGTSRPTHYHVLHDENR 964
Query: 227 FTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSD-SGSMASGA- 284
F+AD+LQ LT NLCYTYARCTRSVS+VPPAYYAHLAAFRAR+Y EP D + S+ SG
Sbjct: 965 FSADQLQMLTYNLCYTYARCTRSVSVVPPAYYAHLAAFRARYYDEPPAMDGASSVGSGGN 1024
Query: 285 -ATSRGLPPGVRSARVAGNVAVRPLPALKENVKRVMFYC 322
A + G PP AVR LP +KENVK VMFYC
Sbjct: 1025 QAAAGGQPP-----------AVRRLPQIKENVKDVMFYC 1052
>Os03g0682600 Similar to Argonaute 4 protein
Length = 895
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/311 (66%), Positives = 243/311 (78%), Gaps = 8/311 (2%)
Query: 13 VDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAH 72
+ ++ RRIPL++D PT+IFGADVTHP GEDSSPSIAAVVAS DWPEV+KY VS+Q+H
Sbjct: 592 LKSMLRRIPLLTDMPTMIFGADVTHPPAGEDSSPSIAAVVASMDWPEVSKYKCSVSSQSH 651
Query: 73 RQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQ-KPQRIIFYRDGVSEGQFYQVL 131
R+E+I DLF +D V GGMI+EL+ SF++A G KP RIIFYRDGVSEGQF QVL
Sbjct: 652 REEIIADLFTEVKDSQNRLVYGGMIRELIESFRKANGSYKPGRIIFYRDGVSEGQFSQVL 711
Query: 132 LYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDS 191
L E+DAIRKACAS+E Y PPVTFVVVQKRHHTRLF +H+ + +DRS NILPGTVVD+
Sbjct: 712 LSEMDAIRKACASIEEGYLPPVTFVVVQKRHHTRLFPEDHHARDQMDRSRNILPGTVVDT 771
Query: 192 KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVS 251
KICHP+EFDFYLCSH+GIQGTS P HY+VL+DEN F+AD LQTLT +LCYTYARCTRSVS
Sbjct: 772 KICHPSEFDFYLCSHSGIQGTSHPTHYYVLFDENNFSADALQTLTYHLCYTYARCTRSVS 831
Query: 252 IVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVAGNVAVRPLPAL 311
IVPP YYAHLAA RAR Y+E GS+ ++S G R R V V+PLP +
Sbjct: 832 IVPPVYYAHLAASRARHYLE-----EGSLPDHGSSSASAAGGSR--RNDRGVPVKPLPEI 884
Query: 312 KENVKRVMFYC 322
KENVK+ MFYC
Sbjct: 885 KENVKQFMFYC 895
>Os02g0169400 Similar to Argonaute 4 protein
Length = 876
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/323 (59%), Positives = 230/323 (71%), Gaps = 12/323 (3%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
IN K+GGRNTVLVDAL R+P V D PTI+FGA VTHPHPG+ +S SIAAVVASQDWPEV
Sbjct: 565 INAKMGGRNTVLVDALEMRLPHVRDTPTIVFGAHVTHPHPGKANSSSIAAVVASQDWPEV 624
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
TKYAGL+S QA QE IQ LFKV DP RGT T GMIKE L+SF RAT +KP RIIFYRD
Sbjct: 625 TKYAGLISVQACHQESIQGLFKVQDDPERGTTTSGMIKEHLMSFYRATKRKPGRIIFYRD 684
Query: 121 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRS 180
GVS+GQ Q L++EL AI+ ACAS+ P+Y P VT+VV+QK HTRLFA+ +N T D +
Sbjct: 685 GVSKGQLPQALMHELGAIKMACASMGPDYNPLVTYVVLQKCRHTRLFADYYN-ANTHDST 743
Query: 181 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLC 240
NI GTVVDS IC P +FDFYLCSH QGT RP +YHVLWDEN F A Q LTN LC
Sbjct: 744 ANIRAGTVVDSNICQPNQFDFYLCSHRSTQGTKRPRYYHVLWDENDFLAGSFQELTNYLC 803
Query: 241 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPET-SDSGSMASGAATSRGLPPGVRSARV 299
YT A CT+S+S+V P +YA L + RAR Y++P + DS S S LP S+
Sbjct: 804 YTSATCTQSISVVAPVHYARLLSSRARCYIKPRSIGDSTSHTS-------LPSEEDSSAA 856
Query: 300 AGNVAVRPLPALKENVKRVMFYC 322
+ ++ P +K+N+K MF+C
Sbjct: 857 SETGSLLP---IKDNLKGAMFFC 876
>Os07g0471300 Similar to Argonaute 4 protein
Length = 718
Score = 343 bits (880), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 175/322 (54%), Positives = 221/322 (68%), Gaps = 34/322 (10%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
IN K GGRN+V ++ + +P+VS PTIIFGADVTHP ++S+PSIA+VVAS DWPEV
Sbjct: 431 INAKAGGRNSVFLN-VEASLPVVSKSPTIIFGADVTHPGSFDESTPSIASVVASADWPEV 489
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
TKY +V QA R+E+IQDL +++ELL +FKR + +P+++IFYRD
Sbjct: 490 TKYNSVVRMQASRKEIIQDL-------------DSIVRELLNAFKRDSKMEPKQLIFYRD 536
Query: 121 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRS 180
GVSEGQF QV+ E+ I KA SL +P +TF+VVQKRHHTRLF NN+ND R +D +
Sbjct: 537 GVSEGQFQQVVESEIPEIEKAWKSLYAG-KPRITFIVVQKRHHTRLFPNNYNDPRGMDGT 595
Query: 181 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLC 240
GN+ PGTVVD+ ICHP EFDF+LCS AGI+GTSRP+HYHVL D+N FTAD+LQ++TNNLC
Sbjct: 596 GNVRPGTVVDTVICHPREFDFFLCSQAGIKGTSRPSHYHVLRDDNNFTADQLQSVTNNLC 655
Query: 241 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVA 300
Y Y CTRSVSI PP YYAH AFRARFY+ + + G P + V
Sbjct: 656 YLYTSCTRSVSIPPPVYYAHKLAFRARFYL-----------TQVPVAGGDPGAAKFQWV- 703
Query: 301 GNVAVRPLPALKENVKRVMFYC 322
LP +KE VK+ MF+C
Sbjct: 704 -------LPEIKEEVKKSMFFC 718
>Os03g0449200 Stem cell self-renewal protein Piwi domain containing protein
Length = 482
Score = 323 bits (827), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/324 (51%), Positives = 203/324 (62%), Gaps = 36/324 (11%)
Query: 1 INVKVGGRNTVLVDALTRRIP--LVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWP 58
IN K+GG N L + +IP +S+ P + GADVTHPHP +DSSPS+ AVVAS +WP
Sbjct: 193 INAKLGGCNIALYSSFPCQIPRIFLSEEPVMFMGADVTHPHPLDDSSPSVVAVVASMNWP 252
Query: 59 EVTKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFY 118
KY + +Q HR+E+I+ L M ELL F + G+ P RIIF+
Sbjct: 253 SANKYISRMRSQTHRKEIIEQL-------------DVMAGELLEEFLKEVGKLPSRIIFF 299
Query: 119 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVD 178
RDGVSE QFY+VL E+ A+R C S P Y+P +TF+VVQKRHHTRLF N +
Sbjct: 300 RDGVSETQFYKVLKEEMHAVRTTC-SRYPGYKPLITFIVVQKRHHTRLFHRERNGSSSHY 358
Query: 179 RSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNN 238
NI PGTVVD+ I HP EFDFYLCSH G +GTSRP HYHVLWDEN F +DE+Q L +N
Sbjct: 359 SDQNIPPGTVVDTVITHPREFDFYLCSHWGTKGTSRPTHYHVLWDENNFRSDEVQQLIHN 418
Query: 239 LCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSAR 298
LCYT+ARCTR VS+VPPAYYAHLAA+R R Y+E S R P
Sbjct: 419 LCYTFARCTRPVSLVPPAYYAHLAAYRGRLYLE---------RSDTTMYRVSP------- 462
Query: 299 VAGNVAVRPLPALKENVKRVMFYC 322
+ PLP L++NVKR+MFYC
Sbjct: 463 ----LQTVPLPKLRDNVKRLMFYC 482
>Os04g0151800 Argonaute and Dicer protein, PAZ domain containing protein
Length = 911
Score = 271 bits (694), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 194/323 (60%), Gaps = 26/323 (8%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
IN K+GG N++L + IPLVS PTII G DV+H PG+ PSIAAVV+S+ WP +
Sbjct: 614 INAKLGGINSLLQIEASPSIPLVSKTPTIILGMDVSHGQPGQSDRPSIAAVVSSRQWPLI 673
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQ-KPQRIIFYR 119
+KY V Q+ + E++ LFK RGT G+I+E LI F ++G+ KP +I +R
Sbjct: 674 SKYRASVHTQSPKLEMMSSLFK-----PRGTEDDGLIRESLIDFYTSSGKRKPDHVIVFR 728
Query: 120 DGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDR 179
DGVSE QF QV+ ELD I +AC L+ + P T +V QK HHT+ F + D
Sbjct: 729 DGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQSGSPD------ 782
Query: 180 SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNL 239
N+ PGTVVD ++CHP +DFY+C+HAG+ GT+RP HYHVL DE F+ D+LQ L ++L
Sbjct: 783 --NVPPGTVVDKQVCHPRNYDFYMCAHAGMIGTTRPTHYHVLHDEIGFSPDDLQELVHSL 840
Query: 240 CYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARV 299
Y Y R T ++S+V P YAHLAA + +++ E S + G TS
Sbjct: 841 SYVYQRSTTAISVVAPICYAHLAAAQVGTFLKFEDMSDASSSQGGHTS------------ 888
Query: 300 AGNVAVRPLPALKENVKRVMFYC 322
G+V V LP L E V+ MF+C
Sbjct: 889 VGSVPVPELPRLHEKVRSSMFFC 911
>Os01g0275600 Similar to Argonaute 4 protein
Length = 904
Score = 271 bits (692), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 195/323 (60%), Gaps = 25/323 (7%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
IN K+GG N++L + IPLVS PTII G DV+H PG+ PSIAAVV+S++WP V
Sbjct: 606 INAKLGGLNSLLQIETSPSIPLVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSREWPLV 665
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQ-KPQRIIFYR 119
+KY V +Q+ + E+I LFK P G+I+ELL+ F +TG+ KP ++I +R
Sbjct: 666 SKYRASVRSQSPKLEMIDGLFK----PQGAQEDDGLIRELLVDFYTSTGKRKPDQVIIFR 721
Query: 120 DGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDR 179
DGVSE QF QVL ELD I +AC L+ N+ P T +V QK HHT+ F +
Sbjct: 722 DGVSESQFTQVLNIELDQIIEACKFLDENWSPKFTLIVAQKNHHTKFFVPGSQN------ 775
Query: 180 SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNL 239
N+ PGTVVD+ +CHP DFY+C+HAG+ GT+RP HYH+L DE F+AD+LQ L ++L
Sbjct: 776 --NVPPGTVVDNAVCHPRNNDFYMCAHAGMIGTTRPTHYHILHDEIGFSADDLQELVHSL 833
Query: 240 CYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARV 299
Y Y R T ++S+V P YAHLAA + +++ + S + G TS
Sbjct: 834 SYVYQRSTTAISVVAPICYAHLAAAQVSQFIKFDEMSETSSSHGGHTS------------ 881
Query: 300 AGNVAVRPLPALKENVKRVMFYC 322
AG+ V LP L V+ MF+C
Sbjct: 882 AGSAPVPELPRLHNKVRSSMFFC 904
>Os04g0615700 Argonaute and Dicer protein, PAZ domain containing protein
Length = 1034
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/321 (45%), Positives = 188/321 (58%), Gaps = 27/321 (8%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
IN K+GG N L +P +S P + GADV HP PG SPSIAAVVAS D
Sbjct: 740 INGKIGGSNIQL---FGESLPRISGAPYMFIGADVNHPSPGNVESPSIAAVVASVDQ-GA 795
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
+KY + AQ HR E+IQ L G M KEL+ F++ KPQRII++RD
Sbjct: 796 SKYVPRIRAQPHRCEVIQHL-------------GDMCKELIGVFEKRNRVKPQRIIYFRD 842
Query: 121 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRS 180
GVS+GQF VL EL + KA + +Y P +T +V +KRHHTRLF + N Q+T ++
Sbjct: 843 GVSDGQFDMVLNEELADMEKAIKT--KDYSPTITVIVAKKRHHTRLFPKDLNQQQT--KN 898
Query: 181 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLC 240
GN+LPGTVVD+ + P +DFYLCSH G+ GTSRP HY+ L DE+ F +D+LQ L NLC
Sbjct: 899 GNVLPGTVVDTGVVDPAAYDFYLCSHNGLIGTSRPTHYYSLLDEHGFASDDLQKLVYNLC 958
Query: 241 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVA 300
+ +ARCT+ VS+ P YYA LAA+R R Y E G M S S S+ A
Sbjct: 959 FVFARCTKPVSLATPVYYADLAAYRGRLYYE------GMMMSQPPPSSAASASSASSSGA 1012
Query: 301 GNVAVRPLPALKENVKRVMFY 321
G R PAL E++ MF+
Sbjct: 1013 GASDFRSFPALHEDLVDNMFF 1033
>Os04g0615800 Stem cell self-renewal protein Piwi domain containing protein
Length = 517
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 170/273 (62%), Gaps = 24/273 (8%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSS--PSIAAVVASQDWP 58
IN K+GG N L IP+VS + + GADV HP PG S PSIAAVVAS D
Sbjct: 181 INGKIGGSNMQLD---PDSIPVVSAKDFMFIGADVNHPPPGNVSKDIPSIAAVVASVD-K 236
Query: 59 EVTKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFY 118
+KY + AQ HR E+IQ+L G + KEL+ ++++ +KP II++
Sbjct: 237 GASKYVTRIRAQYHRCEMIQNL-------------GDICKELIGAYEKVNKKKPDSIIYF 283
Query: 119 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVD 178
RDGVS+GQF VL EL + + +Y P +T +V +KRHHTRLF + N ++T
Sbjct: 284 RDGVSDGQFDMVLNEELADMENKI--MVGDY-PKITVIVAKKRHHTRLFPKDRNQRQT-- 338
Query: 179 RSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNN 238
++GN+LPGTVVD+ + PT +DFYLCSH G GTSRP HY+ L DE+ F +D+LQ L N
Sbjct: 339 KNGNVLPGTVVDTDVVDPTAYDFYLCSHKGEVGTSRPTHYYSLLDEHGFASDDLQKLVYN 398
Query: 239 LCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 271
LC+ +ARCT+ VS+ P YYA LAA+R R Y E
Sbjct: 399 LCFVFARCTKPVSLATPVYYADLAAYRGRLYYE 431
>Os01g0275200 Argonaute and Dicer protein, PAZ domain containing protein
Length = 619
Score = 228 bits (582), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 166/296 (56%), Gaps = 36/296 (12%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
IN K+GG N++L + IPL+S PTII G DV+H PG D PS+AAVV+S +WP +
Sbjct: 312 INAKLGGLNSLLQIERNQAIPLLSKTPTIILGMDVSHGSPGRDDVPSVAAVVSSLEWPLI 371
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
+KY V Q+ R E+I LFK+ G + II RD
Sbjct: 372 SKYKASVCTQSPRLEMIDSLFKL------------------------VGNEDHVII--RD 405
Query: 121 GVSEGQFYQVLLYELDAIRKACASL-----EPNYQPPVTFVVVQKRHHTRLFANNHNDQR 175
GVSEGQF QVL EL I KAC L + + P T +V QK HHT+ F + +++
Sbjct: 406 GVSEGQFNQVLNIELAQIIKACEFLANEKNDSEWSPKFTVIVAQKNHHTKFFQTDRSNKV 465
Query: 176 TVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTL 235
N+ PGTVVD ICHP DFY+C+HAG+ GT+RP HYHVL DEN FT D+LQ L
Sbjct: 466 V-----NVPPGTVVDKGICHPRNCDFYMCAHAGMIGTTRPTHYHVLHDENNFTPDDLQEL 520
Query: 236 TNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLP 291
+NL Y Y R T ++S V P YAHLAA + ++ + + S G A R +P
Sbjct: 521 VHNLSYVYQRSTTAISGVAPICYAHLAAAQVSQFVRLDDAASEGSGDGGAPPRPVP 576
>Os07g0265600 Stem cell self-renewal protein Piwi domain containing protein
Length = 363
Score = 228 bits (580), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 166/274 (60%), Gaps = 13/274 (4%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
IN K+GG N+ L IP+V+ PT+I G DV+H PG PSIAAVV S+ WP +
Sbjct: 65 INAKLGGMNSKLSLEHRHMIPIVNQTPTLILGMDVSHGSPGRADVPSIAAVVGSRCWPLI 124
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQ-KPQRIIFYR 119
++Y V Q+ + E+I LFK D G+I+ELL+ F + + Q KP++II +R
Sbjct: 125 SRYRASVRTQSPKVEMIDSLFKPLDDGK----DDGIIRELLLDFYKTSQQRKPKQIIIFR 180
Query: 120 DGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDR 179
DGVSE QF QVL EL+ I KA ++ P T ++ QK HHT+LF N D
Sbjct: 181 DGVSESQFSQVLNVELNQIIKAYQYMDQGPIPKFTVIIAQKNHHTKLFQENTPD------ 234
Query: 180 SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNL 239
N+ PGTVVDS I HP ++DFY+ +HAG GTSRP HYHVL DE F D++Q L +L
Sbjct: 235 --NVPPGTVVDSGIVHPRQYDFYMYAHAGPIGTSRPTHYHVLLDEIGFLPDDVQKLVLSL 292
Query: 240 CYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPE 273
Y Y R T ++S+V P YAHLAA + +M+ E
Sbjct: 293 SYVYQRSTTAISVVAPICYAHLAAAQMGQFMKFE 326
>Os02g0616400 Stem cell self-renewal protein Piwi domain containing protein
Length = 253
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 83/113 (73%), Gaps = 4/113 (3%)
Query: 66 LVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEG 125
L+SAQ RQE+I LF +DP GMI+EL+++F + +KP+RIIFYRDG+SE
Sbjct: 130 LISAQLERQEIIGGLFHSTRDPKGCLKPDGMIRELMMNFYQRNRRKPERIIFYRDGISES 189
Query: 126 QFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF----ANNHNDQ 174
QF QV+++E+DAIRKAC SL+ +Y PP+T V+VQKRHHTR+F +N+ +Q
Sbjct: 190 QFSQVIIHEVDAIRKACLSLQEDYLPPITLVIVQKRHHTRIFPHTLCSNYTEQ 242
>Os02g0616300 Stem cell self-renewal protein Piwi domain containing protein
Length = 137
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 69/117 (58%), Gaps = 23/117 (19%)
Query: 210 QGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFY 269
+G SRP HY V++DEN FTAD LQ LT+NLCY YARCTR+VSIVPP YYAHLAA R R Y
Sbjct: 40 EGNSRPTHYTVIFDENHFTADGLQLLTHNLCYMYARCTRAVSIVPPLYYAHLAAARGRSY 99
Query: 270 MEPETSDSGSMASGAA----TSRGLPPGVRSARVAGNVAVRPLPALKENVKRVMFYC 322
+ G G++ S LP ++ +P + + V VMFYC
Sbjct: 100 L-------GKFGDGSSIRNEVSSELPEFLK------------VPKIADRVLGVMFYC 137
>Os03g0800200 Stem cell self-renewal protein Piwi domain containing protein
Length = 80
Score = 75.9 bits (185), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/47 (72%), Positives = 36/47 (76%)
Query: 140 KACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPG 186
KACASLE Y PPVTFVVVQKRHHTRLF H + D+SGNILPG
Sbjct: 27 KACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRRDMTDKSGNILPG 73
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,703,334
Number of extensions: 490129
Number of successful extensions: 1273
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 1230
Number of HSP's successfully gapped: 19
Length of query: 322
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 221
Effective length of database: 11,762,187
Effective search space: 2599443327
Effective search space used: 2599443327
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)