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Os04g0151800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Argonaute and Dicer protein, PAZ domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0143) R2 : 0.783
β1 : 1.1 (0.0523) R2dD : 0.22 R2D : 0.128
β2 : 1.24 (0.0373) R2dC : 0.532 R2C : 0.472
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.471 (0.0305) R2dN8 : 0.152 R2N8 : 0.0419
σ : 0.269
deviance : 32.91
__
_____
C
peak time of C : 17.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.93 0.253 11.7 1.16 1.32 0.384 -0.425 -0.873 0.548 18 91.07 737 -- --
29.91 0.257 11.7 1.06 1.38 0.354 -0.115 -- 0.529 17.6 91.07 737 -- --
29.32 0.252 11.7 1.14 1.31 0.388 -- -0.725 0.544 18.1 91.2 749 -- --
29.94 0.257 11.7 1.06 1.38 0.36 -- -- 0.53 17.6 91.07 737 -- --
105.93 0.482 11.7 1.13 -- -0.539 -- -0.415 0.384 -- 93.18 7030 -- --
32.7 0.268 11.7 1.1 1.25 -- -0.293 -- 0.472 17.8 -- -- -- --
32.91 0.269 11.7 1.1 1.24 -- -- -- 0.471 17.8 -- -- -- --
105.93 0.481 11.7 1.13 -- -0.413 -- -- 0.365 -- 88.68 15722 -- --
58.37 0.356 11.7 -- 1.3 0.651 -- -- 0.528 17.9 90.03 3166 -- --
113.14 0.497 11.7 1.07 -- -- -- -- 0.442 -- -- -- -- --
65.06 0.377 11.8 -- 1.23 -- -- -- 0.348 17.9 -- -- -- --
123.33 0.517 11.8 -- -- -0.745 -- -- 0.178 -- 95 47520 -- --
143.14 0.558 11.7 -- -- -- -- -- 0.323 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.69 radiation 1.0 90 < th dose independent rect. 22 13
2 27.70 radiation 1.0 90 < th dose independent rect. 22 10
8 27.85 radiation 1.0 90 < th dose independent rect. 22 17
11 27.92 radiation 1.0 90 < th dose dependent rect. 22 13
12 27.93 radiation 1.0 90 < th dose dependent rect. 22 10
20 28.04 temperature 10.0 90 > th dose dependent rect. 19 14
21 28.06 temperature 10.0 270 > th dose dependent rect. 17 15
22 28.07 radiation 1.0 90 < th dose dependent rect. 22 17
25 28.10 radiation 30.0 270 < th dose independent rect. 13 9
30 28.15 humidity 90.0 10 < th dose independent rect. 4 5
32 28.17 humidity 90.0 10 < th dose independent rect. 2 7
33 28.21 temperature 15.0 270 > th dose independent rect. 17 15
36 28.22 humidity 80.0 10 > th dose dependent rect. 23 13
38 28.24 radiation 20.0 270 < th dose independent rect. 15 17
48 28.28 temperature 15.0 270 > th dose independent rect. 3 18
56 28.31 radiation 10.0 10 < th dose independent rect. 6 17
58 28.32 humidity 90.0 10 < th dose independent rect. 4 19
61 28.35 radiation 40.0 270 < th dose dependent rect. 13 8
65 28.37 temperature 15.0 270 > th dose independent rect. 13 9
67 28.37 humidity 90.0 10 < th dose independent rect. 2 21
76 28.40 precipitation 0.1 270 < th dose independent rect. 17 14
78 28.40 precipitation 0.1 270 < th dose dependent rect. 17 14
81 28.41 radiation 40.0 270 < th dose dependent rect. 15 17
91 28.45 humidity 50.0 270 > th dose dependent rect. 21 6
96 28.46 radiation 40.0 270 < th dose dependent rect. 13 20
98 28.48 atmosphere 1010.0 270 < th dose independent rect. 13 9
105 28.51 wind 9.0 270 < th dose independent rect. 8 9
111 28.52 humidity 50.0 270 > th dose independent rect. 17 14
114 28.53 humidity 90.0 30 > th dose independent rect. 23 15
121 28.53 humidity 90.0 720 > th dose dependent rect. 7 20
122 28.54 humidity 90.0 30 > th dose independent rect. 23 13
128 28.54 humidity 60.0 10 > th dose dependent rect. 23 7
141 28.55 atmosphere 1000.0 270 > th dose independent rect. 22 15
142 28.55 humidity 90.0 10 < th dose independent rect. 17 16
147 28.56 humidity 90.0 10 < th dose independent rect. 19 14
152 28.57 radiation 30.0 270 < th dose independent rect. 17 15
157 28.58 temperature 10.0 270 > th dose independent rect. 7 10
158 28.58 atmosphere 1015.0 270 < th dose independent rect. 7 10
162 28.58 radiation 10.0 10 < th dose dependent rect. 6 17
183 28.62 precipitation 0.1 270 < th dose independent rect. 8 9
185 28.62 precipitation 0.1 270 < th dose dependent rect. 8 9
190 28.63 precipitation 0.1 270 < th dose independent rect. 3 18
197 28.63 precipitation 0.1 270 < th dose dependent rect. 3 18
210 28.66 wind 9.0 270 < th dose independent rect. 17 14
211 28.66 radiation 10.0 30 < th dose independent rect. 9 14
261 28.71 atmosphere 995.0 270 > th dose independent rect. 8 9
307 28.75 wind 9.0 4320 < th dose independent rect. 24 5
308 28.75 temperature 15.0 90 > th dose independent rect. 19 14
309 28.75 atmosphere 1015.0 270 < th dose independent rect. 17 15
319 28.76 atmosphere 995.0 270 > th dose independent rect. 17 15
321 28.76 atmosphere 1015.0 270 < th dose independent rect. 3 18
322 28.76 humidity 80.0 10 > th dose dependent rect. 23 11
333 28.77 atmosphere 995.0 270 > th dose dependent rect. 21 6
341 28.78 wind 1.0 270 > th dose independent rect. 13 9
348 28.79 atmosphere 1000.0 10 > th dose independent rect. 23 7
375 28.81 temperature 10.0 270 > th dose independent rect. 22 15
383 28.82 wind 1.0 270 > th dose independent rect. 8 9
386 28.82 humidity 90.0 720 > th dose dependent rect. 21 5
387 28.82 humidity 90.0 720 > th dose dependent rect. 20 7
400 28.83 radiation 1.0 90 < th dose dependent rect. 22 21
403 28.84 wind 9.0 270 < th dose independent rect. 22 15
410 28.85 atmosphere 1015.0 270 < th dose dependent rect. 15 7
411 28.85 humidity 90.0 4320 > th dose dependent rect. 20 8
413 28.85 atmosphere 1015.0 270 < th dose dependent rect. 13 9
418 28.86 humidity 50.0 270 > th dose independent rect. 22 15
420 28.86 radiation 10.0 270 < th dose independent rect. 3 18
433 28.87 wind 9.0 270 < th dose independent rect. 21 6
434 28.87 precipitation 0.1 270 < th dose independent rect. 21 6
435 28.87 precipitation 0.1 270 < th dose independent rect. 13 9
437 28.87 precipitation 0.1 270 < th dose dependent rect. 21 6
440 28.87 precipitation 0.1 270 < th dose dependent rect. 13 9
447 28.88 temperature 10.0 270 > th dose independent rect. 21 6
448 28.88 temperature 30.0 270 < th dose independent rect. 21 6
449 28.88 humidity 50.0 270 > th dose independent rect. 21 6
452 28.88 atmosphere 995.0 270 > th dose independent rect. 21 6
453 28.88 radiation 1.0 270 < th dose independent rect. 21 6
458 28.88 wind 9.0 4320 < th dose independent rect. 24 7
470 28.88 radiation 1.0 270 < th dose dependent rect. 21 6
487 28.89 wind 1.0 14400 < th dose independent rect. 2 2
490 28.89 humidity 50.0 270 > th dose independent rect. 13 9
504 28.89 radiation 10.0 10 < th dose dependent rect. 9 14
516 28.90 temperature 30.0 10 < th dose dependent rect. 23 7
532 28.91 atmosphere 995.0 10 > th dose dependent rect. 23 7
563 28.93 humidity 90.0 4320 > th dose dependent rect. 23 4
574 28.94 humidity 90.0 720 > th dose dependent sin 14 NA
601 28.95 humidity 90.0 720 > th dose dependent rect. 20 20
628 28.97 wind 9.0 10 < th dose independent rect. 23 7
630 28.97 temperature 10.0 10 > th dose independent rect. 23 7
632 28.97 temperature 30.0 10 < th dose independent rect. 23 7
636 28.97 humidity 50.0 10 > th dose independent rect. 23 7
649 28.97 temperature 10.0 10 > th dose independent rect. 6 17
651 28.97 atmosphere 1015.0 90 < th dose independent rect. 5 17
652 28.97 atmosphere 1015.0 10 < th dose independent rect. 6 17
686 28.98 humidity 90.0 720 > th dose dependent rect. 13 14
698 28.99 radiation 1.0 90 < th dose independent rect. 22 21
704 28.99 radiation 10.0 270 < th dose dependent rect. 3 18
706 29.00 wind 1.0 14400 > th dose independent rect. 2 2
713 29.00 precipitation 0.1 270 < th dose independent rect. 4 16
722 29.00 precipitation 0.1 270 < th dose dependent rect. 4 16
726 29.01 temperature 30.0 270 < th dose independent rect. 17 15
727 29.01 precipitation 0.1 10 < th dose independent rect. 6 17
730 29.01 temperature 15.0 270 > th dose independent rect. 1 22
731 29.01 humidity 90.0 720 > th dose dependent no NA NA
740 29.01 precipitation 0.1 10 < th dose dependent rect. 6 17
744 29.01 humidity 90.0 720 > th dose dependent rect. 13 23
795 29.04 wind 9.0 270 < th dose independent rect. 13 9
820 29.05 wind 9.0 270 < th dose independent rect. 3 18
824 29.05 wind 1.0 14400 < th dose dependent rect. 2 2
835 29.05 radiation 1.0 270 < th dose dependent rect. 20 15
886 29.07 humidity 90.0 720 > th dose dependent rect. 1 23
888 29.08 radiation 1.0 90 < th dose independent sin 9 NA
889 29.08 temperature 10.0 1440 > th dose independent rect. 24 7
892 29.08 temperature 30.0 1440 < th dose independent rect. 24 7
896 29.08 humidity 50.0 1440 > th dose independent rect. 24 7
901 29.08 atmosphere 995.0 1440 > th dose independent rect. 24 7
902 29.08 radiation 40.0 1440 < th dose independent rect. 24 7
909 29.08 temperature 10.0 1440 > th dose independent rect. 7 17
913 29.08 atmosphere 1000.0 270 > th dose dependent rect. 24 7
932 29.09 radiation 1.0 270 > th dose independent rect. 8 9
934 29.09 precipitation 0.1 270 < th dose independent rect. 22 15
942 29.09 precipitation 0.1 270 < th dose dependent rect. 22 15
954 29.10 wind 9.0 10 < th dose independent rect. 6 17