Os02g0831600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AGO1 homologous protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0831600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : AGO1 homologous protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.04 | 0.342 | 8.52 | 0.317 | 0.179 | -0.297 | -0.236 | -1.66 | 0.145 | 0.437 | 44.91 | 1224 | -- | -- |
| 56.53 | 0.35 | 8.52 | 0.435 | 0.146 | -0.4 | -0.348 | -- | 0.164 | 0.258 | 45.02 | 2844 | -- | -- |
| 53.28 | 0.34 | 8.52 | 0.319 | 0.179 | -0.297 | -- | -1.7 | 0.146 | 0.463 | 44.79 | 1223 | -- | -- |
| 56.74 | 0.351 | 8.51 | 0.487 | 0.181 | -0.332 | -- | -- | 0.196 | 0.237 | 40 | 1232 | -- | -- |
| 55.22 | 0.346 | 8.52 | 0.332 | -- | -0.239 | -- | -1.68 | 0.142 | -- | 45.02 | 1224 | -- | -- |
| 59.26 | 0.361 | 8.52 | 0.445 | 0.125 | -- | -0.397 | -- | 0.146 | 0.254 | -- | -- | -- | -- |
| 59.93 | 0.363 | 8.52 | 0.46 | 0.127 | -- | -- | -- | 0.148 | 0.651 | -- | -- | -- | -- |
| 58.24 | 0.355 | 8.52 | 0.491 | -- | -0.429 | -- | -- | 0.157 | -- | 50 | 2078 | -- | -- |
| 62.26 | 0.367 | 8.53 | -- | 0.175 | -0.397 | -- | -- | 0.0919 | 0.52 | 48.7 | 2965 | -- | -- |
| 60.94 | 0.365 | 8.52 | 0.465 | -- | -- | -- | -- | 0.15 | -- | -- | -- | -- | -- |
| 65.5 | 0.379 | 8.53 | -- | 0.134 | -- | -- | -- | 0.0968 | 0.814 | -- | -- | -- | -- |
| 63.23 | 0.37 | 8.53 | -- | -- | -0.561 | -- | -- | 0.0804 | -- | 51.68 | 3037 | -- | -- |
| 66.63 | 0.381 | 8.53 | -- | -- | -- | -- | -- | 0.0987 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.52 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 2 | 46.59 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 3 | 46.63 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 4 | 46.64 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 8 | 46.91 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 13 | 47.57 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 18 | 47.74 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 20 | 47.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 23 | 48.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 30 | 48.34 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 33 | 48.49 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 34 | 48.49 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 36 | 48.53 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 40 | 48.76 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 41 | 48.88 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 67 | 49.39 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 69 | 49.41 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 13 |
| 78 | 49.50 | wind | 7.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 83 | 49.55 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 120 | 49.85 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 134 | 49.93 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 149 | 50.00 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 153 | 50.02 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 168 | 50.08 | wind | 3.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 169 | 50.08 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 24 | 13 |
| 178 | 50.12 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 15 |
| 179 | 50.12 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 15 |
| 182 | 50.12 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 15 |
| 193 | 50.18 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 199 | 50.21 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 207 | 50.22 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 14 |
| 208 | 50.24 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 218 | 50.28 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 2 | 3 |
| 261 | 50.39 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 276 | 50.44 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 295 | 50.50 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 299 | 50.52 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 300 | 50.52 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 305 | 50.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 306 | 50.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 307 | 50.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 351 | 50.60 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 2 |
| 385 | 50.66 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 388 | 50.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 391 | 50.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 404 | 50.69 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 12 |
| 407 | 50.69 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 12 |
| 413 | 50.70 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 12 |
| 415 | 50.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 418 | 50.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 419 | 50.71 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 422 | 50.71 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 12 |
| 429 | 50.72 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 451 | 50.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 462 | 50.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 482 | 50.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 486 | 50.82 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 490 | 50.82 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 502 | 50.84 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 506 | 50.84 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 573 | 50.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 576 | 50.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 592 | 50.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 596 | 50.98 | wind | 3.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 605 | 50.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 610 | 50.98 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 7 |
| 621 | 51.00 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 623 | 51.01 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 5 | NA |
| 635 | 51.02 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 5 | NA |
| 641 | 51.02 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 5 | NA |
| 646 | 51.03 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 650 | 51.03 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 679 | 51.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 715 | 51.11 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 740 | 51.13 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 743 | 51.13 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 744 | 51.13 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 4 |
| 751 | 51.15 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 8 |
| 753 | 51.15 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 6 | NA |
| 756 | 51.15 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 8 |
| 780 | 51.18 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 4 |
| 787 | 51.18 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 8 |
| 797 | 51.19 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 8 |
| 813 | 51.21 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 819 | 51.21 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 827 | 51.22 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 6 |
| 842 | 51.24 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 846 | 51.24 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 866 | 51.26 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 908 | 51.29 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 927 | 51.31 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 928 | 51.31 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 981 | 51.35 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 994 | 51.36 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 9 |