Os03g0449200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Stem cell self-renewal protein Piwi domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0449200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Stem cell self-renewal protein Piwi domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.21 | 0.426 | 3.37 | 0.247 | 0.109 | 0.19 | -0.225 | 1.73 | 0.023 | 4.29 | 81 | 5922 | -- | -- |
| 86.14 | 0.432 | 3.36 | 0.0559 | 0.13 | 0.258 | -0.249 | -- | -0.0498 | 4.69 | 82.02 | 7913 | -- | -- |
| 82.33 | 0.423 | 3.37 | 0.243 | 0.11 | 0.191 | -- | 1.74 | 0.0209 | 4.68 | 81.24 | 5929 | -- | -- |
| 86.27 | 0.433 | 3.36 | 0.0559 | 0.129 | 0.272 | -- | -- | -0.0577 | 5.25 | 83 | 7915 | -- | -- |
| 82.94 | 0.424 | 3.36 | 0.265 | -- | 0.144 | -- | 1.81 | 0.0517 | -- | 80.8 | 5921 | -- | -- |
| 87.32 | 0.438 | 3.34 | 0.0123 | 0.108 | -- | -0.295 | -- | 0.0437 | 4.08 | -- | -- | -- | -- |
| 87.54 | 0.438 | 3.34 | 0.016 | 0.11 | -- | -- | -- | 0.0453 | 4.87 | -- | -- | -- | -- |
| 86.89 | 0.434 | 3.36 | 0.0591 | -- | 0.272 | -- | -- | -0.0535 | -- | 82.91 | 7066 | -- | -- |
| 86.35 | 0.433 | 3.36 | -- | 0.129 | 0.271 | -- | -- | -0.0622 | 5.44 | 83 | 7930 | -- | -- |
| 88.18 | 0.439 | 3.34 | 0.02 | -- | -- | -- | -- | 0.0482 | -- | -- | -- | -- | -- |
| 87.55 | 0.438 | 3.34 | -- | 0.111 | -- | -- | -- | 0.0435 | 4.87 | -- | -- | -- | -- |
| 86.98 | 0.434 | 3.37 | -- | -- | 0.269 | -- | -- | -0.0623 | -- | 82.86 | 7065 | -- | -- |
| 88.19 | 0.438 | 3.34 | -- | -- | -- | -- | -- | 0.0459 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.01 | temperature | 25.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 2 | 79.01 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 4 | 79.02 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 7 | 79.10 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 3 |
| 11 | 79.28 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 13 | 79.65 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 15 | 79.72 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 3 |
| 17 | 79.97 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 3 |
| 19 | 80.34 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 24 | 80.76 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 26 | 80.86 | temperature | 25.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 27 | 80.87 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 3 |
| 29 | 80.89 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 44 | 81.13 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 56 | 81.27 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 57 | 81.32 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 23 |
| 68 | 81.58 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 70 | 81.59 | wind | 5.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 72 | 81.60 | wind | 7.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 76 | 81.63 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 78 | 81.65 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 84 | 81.69 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 87 | 81.71 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 90 | 81.71 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 94 | 81.71 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 95 | 81.71 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 97 | 81.71 | radiation | 1.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 102 | 81.71 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 104 | 81.71 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 116 | 81.75 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 1 |
| 117 | 81.75 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 143 | 81.78 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 149 | 81.79 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 156 | 81.85 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 157 | 81.87 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 159 | 81.87 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 162 | 81.87 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 166 | 81.87 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 175 | 81.87 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 176 | 81.87 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 177 | 81.87 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 186 | 81.87 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 198 | 81.95 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 23 |
| 200 | 81.95 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 206 | 82.17 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 2 | 7 |
| 207 | 82.18 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 226 | 82.49 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 231 | 82.54 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 21 |
| 234 | 82.63 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 22 | 12 |
| 244 | 82.75 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 254 | 82.90 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 258 | 82.93 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 259 | 82.93 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 5 | 8 |
| 262 | 82.94 | wind | 5.0 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 263 | 82.95 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 266 | 82.95 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 278 | 82.96 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 5 | 8 |
| 280 | 82.96 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 8 | 3 |
| 281 | 82.97 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 287 | 82.99 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 288 | 82.99 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 5 | 8 |
| 296 | 83.00 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 302 | 83.02 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 303 | 83.02 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 324 | 83.05 | wind | 5.0 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 352 | 83.08 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 386 | 83.10 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 23 | 14 |
| 392 | 83.11 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 394 | 83.11 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 8 | 4 |
| 409 | 83.12 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 10 | 2 |
| 429 | 83.14 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 482 | 83.17 | humidity | 70.0 | 4320 | > th | dose dependent | sin | 3 | NA |
| 511 | 83.19 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 553 | 83.22 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 579 | 83.23 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 592 | 83.23 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 5 | NA |
| 615 | 83.24 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 616 | 83.24 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 637 | 83.25 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 645 | 83.25 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 691 | 83.27 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 2 | 3 |
| 732 | 83.29 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 754 | 83.30 | humidity | 80.0 | 4320 | < th | dose independent | sin | 2 | NA |
| 787 | 83.31 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 21 |
| 811 | 83.32 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 841 | 83.32 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 16 |
| 847 | 83.33 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 857 | 83.33 | temperature | 20.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 885 | 83.34 | humidity | 80.0 | 4320 | > th | dose independent | sin | 2 | NA |
| 1000 | 83.37 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 8 | 3 |