Os07g0188000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Argonaute 4 protein.
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Os07g0188000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Argonaute 4 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 188.76 | 0.646 | 2.89 | 0.154 | 0.176 | -2.99 | -0.269 | 47.5 | -0.0573 | 0.788 | 33.86 | 3 | -- | -- |
| 194.57 | 0.655 | 2.92 | -0.124 | 0.179 | 3.37 | -0.274 | -- | -0.0559 | 0.865 | 33.86 | 3 | -- | -- |
| 189 | 0.64 | 2.89 | 0.169 | 0.178 | -3.1 | -- | 48.3 | -0.0562 | 1.11 | 33.84 | 4 | -- | -- |
| 191.64 | 0.649 | 2.92 | -0.108 | 0.169 | 4.51 | -- | -- | -0.0589 | 0.907 | 34.29 | 3 | -- | -- |
| 190.94 | 0.644 | 2.88 | 0.176 | -- | -3.25 | -- | 48.7 | -0.0535 | -- | 33.85 | 4 | -- | -- |
| 214.07 | 0.686 | 2.93 | -0.0917 | 0.12 | -- | -0.394 | -- | -0.0752 | 0.012 | -- | -- | -- | -- |
| 214.74 | 0.686 | 2.93 | -0.0761 | 0.121 | -- | -- | -- | -0.0734 | 0.018 | -- | -- | -- | -- |
| 193.42 | 0.651 | 2.92 | -0.101 | -- | 4.41 | -- | -- | -0.056 | -- | 34.29 | 3 | -- | -- |
| 191.95 | 0.649 | 2.92 | -- | 0.167 | 4.49 | -- | -- | -0.0469 | 0.876 | 34.29 | 3 | -- | -- |
| 215.67 | 0.686 | 2.93 | -0.0723 | -- | -- | -- | -- | -0.0717 | -- | -- | -- | -- | -- |
| 214.89 | 0.686 | 2.93 | -- | 0.12 | -- | -- | -- | -0.0649 | 24 | -- | -- | -- | -- |
| 193.69 | 0.65 | 2.92 | -- | -- | 4.39 | -- | -- | -0.0448 | -- | 34.29 | 3 | -- | -- |
| 215.81 | 0.686 | 2.92 | -- | -- | -- | -- | -- | -0.0637 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 190.44 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 12 | 3 |
| 2 | 191.54 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 12 | 1 |
| 3 | 191.55 | humidity | 50 | 90 | < th | dose independent | rect. | 13 | 2 |
| 4 | 191.55 | humidity | 50 | 90 | < th | dose dependent | rect. | 13 | 2 |
| 7 | 191.63 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 24 | 194.12 | wind | 1 | 270 | < th | dose dependent | rect. | 15 | 8 |
| 25 | 194.39 | wind | 1 | 270 | < th | dose dependent | rect. | 20 | 3 |
| 26 | 194.51 | wind | 1 | 270 | < th | dose independent | rect. | 21 | 2 |
| 51 | 196.59 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 10 | 4 |
| 72 | 197.93 | wind | 1 | 30 | < th | dose dependent | rect. | 21 | 3 |
| 88 | 198.34 | wind | 3 | 90 | < th | dose dependent | sin | 16 | NA |
| 90 | 198.37 | wind | 3 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 93 | 198.42 | temperature | 30 | 90 | > th | dose dependent | rect. | 12 | 3 |
| 97 | 198.52 | wind | 1 | 270 | < th | dose independent | rect. | 16 | 7 |
| 100 | 198.65 | wind | 1 | 30 | < th | dose dependent | rect. | 23 | 1 |
| 137 | 199.57 | humidity | 60 | 10 | < th | dose dependent | rect. | 12 | 4 |
| 199 | 200.21 | humidity | 60 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 295 | 201.03 | wind | 1 | 270 | < th | dose independent | rect. | 12 | 11 |
| 407 | 202.08 | wind | 3 | 270 | < th | dose independent | rect. | 11 | 16 |
| 418 | 202.22 | temperature | 30 | 270 | > th | dose dependent | sin | 8 | NA |
| 430 | 202.33 | wind | 3 | 270 | < th | dose independent | sin | 17 | NA |
| 493 | 202.74 | temperature | 30 | 10 | > th | dose dependent | sin | 20 | NA |
| 520 | 202.89 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 19 | 2 |
| 521 | 202.89 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 19 | 3 |
| 525 | 202.89 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 3 | 23 |
| 527 | 202.89 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 19 | 2 |
| 528 | 202.89 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 19 | 3 |
| 584 | 203.01 | wind | 3 | 270 | > th | dose independent | sin | 17 | NA |
| 643 | 203.20 | wind | 3 | 270 | > th | dose independent | rect. | 12 | 13 |
| 795 | 203.63 | temperature | 30 | 90 | > th | dose dependent | sin | 2 | NA |
| 830 | 203.77 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 834 | 203.79 | temperature | 30 | 10 | > th | dose dependent | no | NA | NA |
| 976 | 203.87 | wind | 3 | 30 | < th | dose dependent | rect. | 2 | 1 |