Os07g0471300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Argonaute 4 protein.
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Os07g0471300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Argonaute 4 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 175.3 | 0.622 | 9.46 | 3.59 | 0.937 | 4.39 | 0.201 | -6.7 | 1.34 | 4.38 | 0.245 | 300 | -- | -- |
| 182.47 | 0.629 | 9.44 | 3.76 | 1 | 3.74 | 0.331 | -- | 1.29 | 4.05 | 0.3234 | 297 | -- | -- |
| 172.94 | 0.612 | 9.46 | 3.53 | 0.919 | 4.23 | -- | -6.13 | 1.36 | 4.48 | 0.2437 | 419 | -- | -- |
| 174.26 | 0.615 | 9.44 | 3.56 | 0.978 | 2.71 | -- | -- | 1.31 | 4.66 | 0.3955 | 426 | -- | -- |
| 217.47 | 0.687 | 9.45 | 3.66 | -- | 3.07 | -- | -1.89 | 1.36 | -- | 0.1906 | 419 | -- | -- |
| 198.72 | 0.661 | 9.44 | 3.83 | 0.904 | -- | 0.156 | -- | 1.3 | 4.06 | -- | -- | -- | -- |
| 198.78 | 0.66 | 9.45 | 3.83 | 0.906 | -- | -- | -- | 1.3 | 4.09 | -- | -- | -- | -- |
| 217.37 | 0.687 | 9.44 | 3.65 | -- | 2.59 | -- | -- | 1.37 | -- | 0.0636 | 421 | -- | -- |
| 472.06 | 1.01 | 9.48 | -- | 0.966 | 2.86 | -- | -- | 1.12 | 4.28 | 0.1461 | 1984 | -- | -- |
| 243.4 | 0.729 | 9.45 | 3.87 | -- | -- | -- | -- | 1.33 | -- | -- | -- | -- | -- |
| 585.37 | 1.13 | 9.54 | -- | 0.98 | -- | -- | -- | 0.877 | 4.03 | -- | -- | -- | -- |
| 516.84 | 1.06 | 9.5 | -- | -- | 2.69 | -- | -- | 1.14 | -- | 0.2786 | 2220 | -- | -- |
| 637.77 | 1.18 | 9.55 | -- | -- | -- | -- | -- | 0.898 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 156.00 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 2 | 156.51 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 3 | 156.79 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 4 | 156.89 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 13 |
| 7 | 157.01 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 16 |
| 9 | 157.03 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 13 |
| 11 | 157.09 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 8 |
| 20 | 157.25 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 21 | 157.25 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 36 | 157.91 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 41 | 158.25 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 64 | 159.02 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 87 | 159.47 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 120 | 159.98 | wind | 7.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 122 | 159.98 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 124 | 160.03 | wind | 7.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 131 | 160.15 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 144 | 160.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 271 | 161.54 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 272 | 161.54 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 277 | 161.57 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 279 | 161.58 | wind | 7.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 294 | 161.67 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 21 |
| 365 | 161.98 | wind | 5.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 379 | 162.03 | wind | 5.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 551 | 162.80 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 17 | 13 |
| 568 | 162.85 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 623 | 163.08 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 693 | 163.28 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 701 | 163.30 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 4 | 16 |
| 702 | 163.30 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 14 | 18 |
| 748 | 163.42 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 816 | 163.65 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 920 | 163.87 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 930 | 163.90 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 962 | 163.96 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 992 | 164.01 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 15 |