Os01g0275200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Argonaute and Dicer protein, PAZ domain containing protein.
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Os01g0275200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Argonaute and Dicer protein, PAZ domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.97 | 0.614 | 6.89 | 1.86 | 0.947 | -1.13 | -0.403 | -1.03 | 0.256 | 16.2 | 21.6 | 1528 | -- | -- |
| 171.24 | 0.609 | 6.85 | 2.09 | 0.89 | -0.957 | -0.602 | -- | 0.337 | 16.5 | 22.2 | 1130 | -- | -- |
| 171.39 | 0.61 | 6.89 | 1.86 | 0.952 | -1.13 | -- | -1.04 | 0.254 | 16.2 | 21.52 | 1571 | -- | -- |
| 171.49 | 0.61 | 6.85 | 2.03 | 0.9 | -0.96 | -- | -- | 0.325 | 16.6 | 22.1 | 1102 | -- | -- |
| 213.47 | 0.68 | 6.86 | 1.8 | -- | -1.06 | -- | -0.662 | 0.271 | -- | 22.1 | 1140 | -- | -- |
| 206.95 | 0.674 | 6.92 | 1.69 | 0.964 | -- | -0.48 | -- | 0.00851 | 16.1 | -- | -- | -- | -- |
| 207.6 | 0.675 | 6.92 | 1.69 | 0.961 | -- | -- | -- | 0.00586 | 16.1 | -- | -- | -- | -- |
| 214.23 | 0.682 | 6.84 | 1.99 | -- | -0.998 | -- | -- | 0.334 | -- | 22.42 | 1150 | -- | -- |
| 267.94 | 0.762 | 6.93 | -- | 0.895 | -0.535 | -- | -- | -0.00415 | 16.6 | 22.4 | 762 | -- | -- |
| 257.72 | 0.75 | 6.92 | 1.65 | -- | -- | -- | -- | -0.0197 | -- | -- | -- | -- | -- |
| 282.57 | 0.786 | 6.97 | -- | 0.929 | -- | -- | -- | -0.182 | 16.2 | -- | -- | -- | -- |
| 311.74 | 0.822 | 6.92 | -- | -- | -0.601 | -- | -- | -0.0121 | -- | 22.49 | 1043 | -- | -- |
| 329.34 | 0.847 | 6.96 | -- | -- | -- | -- | -- | -0.203 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 167.90 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 4 | 169.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 6 | 169.83 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 8 |
| 8 | 169.84 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 9 | 169.89 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 14 | 170.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 15 | 170.36 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 16 | 170.44 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 19 | 170.75 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 7 |
| 22 | 170.80 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 31 | 171.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 32 | 171.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 33 | 171.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 36 | 171.10 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 45 | 171.42 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 13 |
| 49 | 171.44 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 78 | 171.94 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 86 | 172.15 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 133 | 173.11 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 142 | 173.25 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 150 | 173.38 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 151 | 173.40 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 173 | 173.71 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 179 | 173.82 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 190 | 174.04 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 192 | 174.07 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 212 | 174.29 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 22 |
| 224 | 174.45 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 226 | 174.47 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 228 | 174.50 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 229 | 174.51 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 239 | 174.56 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 243 | 174.58 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 248 | 174.60 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 261 | 174.68 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 291 | 174.88 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 315 | 175.07 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 317 | 175.08 | wind | 9.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 333 | 175.19 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 338 | 175.24 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 339 | 175.24 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 367 | 175.44 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 383 | 175.57 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 416 | 175.73 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 420 | 175.73 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 13 |
| 545 | 176.41 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 573 | 176.51 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 584 | 176.54 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 608 | 176.64 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 619 | 176.67 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 633 | 176.72 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 670 | 176.80 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 685 | 176.84 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 12 | 9 |
| 700 | 176.87 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 783 | 177.07 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 874 | 177.33 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 949 | 177.51 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 961 | 177.55 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 6 |