BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0191000 Os04g0191000|AK121055
(1463 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0191000 Retrotransposon gag protein family protein 2581 0.0
Os10g0317000 Retrotransposon gag protein family protein 1796 0.0
Os06g0493000 RNA-directed DNA polymerase (Reverse transcrip... 677 0.0
Os04g0389000 Integrase, catalytic region domain containing ... 554 e-157
Os08g0123950 Integrase, catalytic region domain containing ... 482 e-136
Os08g0164800 RNA-directed DNA polymerase (Reverse transcrip... 472 e-133
Os08g0451600 Peptidase aspartic, catalytic domain containin... 457 e-128
Os07g0510800 RNA-directed DNA polymerase (Reverse transcrip... 434 e-121
Os12g0121200 Peptidase aspartic, catalytic domain containin... 370 e-102
Os09g0491900 Integrase, catalytic region domain containing ... 277 4e-74
Os06g0266100 Integrase, catalytic region domain containing ... 245 2e-64
Os08g0273000 RNA-directed DNA polymerase (Reverse transcrip... 240 6e-63
Os11g0224300 Integrase, catalytic region domain containing ... 238 2e-62
Os04g0682600 Integrase, catalytic region domain containing ... 207 3e-53
Os06g0713500 Integrase, catalytic region domain containing ... 170 6e-42
Os11g0617500 RNA-directed DNA polymerase (Reverse transcrip... 140 5e-33
Os01g0640066 132 2e-30
Os01g0392300 124 4e-28
Os03g0377400 Chromo domain containing protein 105 2e-22
Os06g0590100 97 7e-20
Os06g0513889 92 3e-18
Os04g0134833 91 8e-18
Os11g0457200 91 9e-18
Os07g0302600 87 1e-16
Os06g0513700 84 8e-16
Os07g0195900 82 4e-15
Os06g0513835 82 4e-15
Os04g0283700 Chromo domain containing protein 81 5e-15
Os06g0471300 79 2e-14
Os06g0638300 78 5e-14
Os02g0522000 Retrotransposon gag protein family protein 73 2e-12
Os09g0250500 Integrase, catalytic region domain containing ... 71 5e-12
Os11g0524800 69 4e-11
>Os04g0191000 Retrotransposon gag protein family protein
Length = 1463
Score = 2581 bits (6690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1288/1463 (88%), Positives = 1288/1463 (88%)
Query: 1 MAEPTIADLLKEIKNMSAELTSLKADMATMKDKASTAASTETRHPDGLRDLDLPPRPKKW 60
MAEPTIADLLKEIKNMSAELTSLKADMATMKDKASTAASTETRHPDGLRDLDLPPRPKKW
Sbjct: 1 MAEPTIADLLKEIKNMSAELTSLKADMATMKDKASTAASTETRHPDGLRDLDLPPRPKKW 60
Query: 61 DFPRYDGTTDPLLFLNKFEAYFRHHRTMAEERVGMASYHLDDVTQTWYTQLLEDEGTPTW 120
DFPRYDGTTDPLLFLNKFEAYFRHHRTMAEERVGMASYHLDDVTQTWYTQLLEDEGTPTW
Sbjct: 61 DFPRYDGTTDPLLFLNKFEAYFRHHRTMAEERVGMASYHLDDVTQTWYTQLLEDEGTPTW 120
Query: 121 GRFKELVNLRFGPPLRSAPLFELSECRRTGTVEEYSNRFQALLPRAGRLDESQRVQLFTG 180
GRFKELVNLRFGPPLRSAPLFELSECRRTGTVEEYSNRFQALLPRAGRLDESQRVQLFTG
Sbjct: 121 GRFKELVNLRFGPPLRSAPLFELSECRRTGTVEEYSNRFQALLPRAGRLDESQRVQLFTG 180
Query: 181 GLLPPLSHAVRIHHPETLAAAMSLARQVELMEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
GLLPPLSHAVRIHHPETLAAAMSLARQVELME
Sbjct: 181 GLLPPLSHAVRIHHPETLAAAMSLARQVELMERDRPAPPPLRAPPRGLLPAPAPRLALPA 240
Query: 241 XXXXXXXXXXXXXXXXXXXXXNPRRLTPEEMAERCRQGLCFNCNEKFTRGHNRFCRRLFF 300
NPRRLTPEEMAERCRQGLCFNCNEKFTRGHNRFCRRLFF
Sbjct: 241 PAQQLALPAPPAAAPQGRDAANPRRLTPEEMAERCRQGLCFNCNEKFTRGHNRFCRRLFF 300
Query: 301 VDGVXXXXXXXXXXXXXXXXXXXXPVFSLHAVAGVPIADTIQLQVTVXXXXXXXXXXXXX 360
VDGV PVFSLHAVAGVPIADTIQLQVTV
Sbjct: 301 VDGVEIDDVAIEGDAAAAAGDTEAPVFSLHAVAGVPIADTIQLQVTVGDASLLALLDGGS 360
Query: 361 THSFIGEEAARRAGLPIQSSPRMTAIVANGERVACPGVIRDAAFTINGSTFHTDLFVMPL 420
THSFIGEEAARRAGLPIQSSPRMTAIVANGERVACPGVIRDAAFTINGSTFHTDLFVMPL
Sbjct: 361 THSFIGEEAARRAGLPIQSSPRMTAIVANGERVACPGVIRDAAFTINGSTFHTDLFVMPL 420
Query: 421 AGFDVVLGTRWLGTLGPIVWDFTSRSMAFQRDGQRFAWKGVASTSTTHLRTLAAASGTLL 480
AGFDVVLGTRWLGTLGPIVWDFTSRSMAFQRDGQRFAWKGVASTSTTHLRTLAAASGTLL
Sbjct: 421 AGFDVVLGTRWLGTLGPIVWDFTSRSMAFQRDGQRFAWKGVASTSTTHLRTLAAASGTLL 480
Query: 481 DELLVAYEDVFGEPTGLPPPRGRDHAIVLKPSSAPVAVRPYRYPAAHKDELERQCAAMIE 540
DELLVAYEDVFGEPTGLPPPRGRDHAIVLKPSSAPVAVRPYRYPAAHKDELERQCAAMIE
Sbjct: 481 DELLVAYEDVFGEPTGLPPPRGRDHAIVLKPSSAPVAVRPYRYPAAHKDELERQCAAMIE 540
Query: 541 QGVVRRSDSPFSSPVLLVKKADGSWRFCVDYRALNALTVKDAFPIPVVDELHGARFFTKL 600
QGVVRRSDSPFSSPVLLVKKADGSWRFCVDYRALNALTVKDAFPIPVVDELHGARFFTKL
Sbjct: 541 QGVVRRSDSPFSSPVLLVKKADGSWRFCVDYRALNALTVKDAFPIPVVDELHGARFFTKL 600
Query: 601 DLRSGYHQVRMRPEDVHKTAFRTHDGLYEFLVMPFGLCNAPATFQALMNXXXXXXXXXXX 660
DLRSGYHQVRMRPEDVHKTAFRTHDGLYEFLVMPFGLCNAPATFQALMN
Sbjct: 601 DLRSGYHQVRMRPEDVHKTAFRTHDGLYEFLVMPFGLCNAPATFQALMNDVLRPFLRRFV 660
Query: 661 XXXXXXILIYSETWTDHLRHLRTVLSVLRQHRLFVKRSKCTFGSPSVSYLGHVISEAGVA 720
ILIYSETWTDHLRHLRTVLSVLRQHRLFVKRSKCTFGSPSVSYLGHVISEAGVA
Sbjct: 661 LVFFDDILIYSETWTDHLRHLRTVLSVLRQHRLFVKRSKCTFGSPSVSYLGHVISEAGVA 720
Query: 721 MDPAKVQAIHEWLVPRSARAVRSFLGLAGYYRKFVHNYGTIAAPLTALTKKDGFSWTEDT 780
MDPAKVQAIHEWLVPRSARAVRSFLGLAGYYRKFVHNYGTIAAPLTALTKKDGFSWTEDT
Sbjct: 721 MDPAKVQAIHEWLVPRSARAVRSFLGLAGYYRKFVHNYGTIAAPLTALTKKDGFSWTEDT 780
Query: 781 XXXXXXXXXXVTSAPVLAMPDFAKPFTVEGDASTHGFGAVLVQDGHPVAFFSRPVVLRHR 840
VTSAPVLAMPDFAKPFTVEGDASTHGFGAVLVQDGHPVAFFSRPVVLRHR
Sbjct: 781 AAAFDALKAAVTSAPVLAMPDFAKPFTVEGDASTHGFGAVLVQDGHPVAFFSRPVVLRHR 840
Query: 841 ALAAYERELIGLVHAVRHWRPYLWGRRFVVKTDHYSLKYLLDQRLATIPQHHWVGKLLGF 900
ALAAYERELIGLVHAVRHWRPYLWGRRFVVKTDHYSLKYLLDQRLATIPQHHWVGKLLGF
Sbjct: 841 ALAAYERELIGLVHAVRHWRPYLWGRRFVVKTDHYSLKYLLDQRLATIPQHHWVGKLLGF 900
Query: 901 DFAVEYKPGAANTVADALSRRDTEEGAILALSAPRFDFISKLHDAQRQDPALTALRDEVS 960
DFAVEYKPGAANTVADALSRRDTEEGAILALSAPRFDFISKLHDAQRQDPALTALRDEVS
Sbjct: 901 DFAVEYKPGAANTVADALSRRDTEEGAILALSAPRFDFISKLHDAQRQDPALTALRDEVS 960
Query: 961 AGTRTGPWALVDDLLQYNSWLYIPPASPLAREIIEATHEDGHEGVKRTMHRLRREFHIPN 1020
AGTRTGPWALVDDLLQYNSWLYIPPASPLAREIIEATHEDGHEGVKRTMHRLRREFHIPN
Sbjct: 961 AGTRTGPWALVDDLLQYNSWLYIPPASPLAREIIEATHEDGHEGVKRTMHRLRREFHIPN 1020
Query: 1021 MKQLVQDWVRSCAVCQRYKSEHXXXXXXXXXXXXXQGVWTDIALDFIEALPRVRGKSVIL 1080
MKQLVQDWVRSCAVCQRYKSEH QGVWTDIALDFIEALPRVRGKSVIL
Sbjct: 1021 MKQLVQDWVRSCAVCQRYKSEHLSPAGLLLPLPVPQGVWTDIALDFIEALPRVRGKSVIL 1080
Query: 1081 TVVDRFSKYCHFIPLAHPYSAESVAQAFFAEIVHLHGVPQSMVSDRDPIFTSTFWRELMR 1140
TVVDRFSKYCHFIPLAHPYSAESVAQAFFAEIVHLHGVPQSMVSDRDPIFTSTFWRELMR
Sbjct: 1081 TVVDRFSKYCHFIPLAHPYSAESVAQAFFAEIVHLHGVPQSMVSDRDPIFTSTFWRELMR 1140
Query: 1141 LMGTKLHMTTAFHPQSDGQSEAANRVIIMYLRCLTGDRPRQWLRWLPWAEFIFNTAYQSS 1200
LMGTKLHMTTAFHPQSDGQSEAANRVIIMYLRCLTGDRPRQWLRWLPWAEFIFNTAYQSS
Sbjct: 1141 LMGTKLHMTTAFHPQSDGQSEAANRVIIMYLRCLTGDRPRQWLRWLPWAEFIFNTAYQSS 1200
Query: 1201 LRDTPFRVVYGRDPPSIRSYEAGDTRVAAVAKSMEERAEFLFDIRYRLEQAQAVQKLHYD 1260
LRDTPFRVVYGRDPPSIRSYEAGDTRVAAVAKSMEERAEFLFDIRYRLEQAQAVQKLHYD
Sbjct: 1201 LRDTPFRVVYGRDPPSIRSYEAGDTRVAAVAKSMEERAEFLFDIRYRLEQAQAVQKLHYD 1260
Query: 1261 KHHRHVAYQVGDWALLRLRQRPTTSLPQSGTGKLKPRFYGPYRITELINDVAVRLELPAG 1320
KHHRHVAYQVGDWALLRLRQRPTTSLPQSGTGKLKPRFYGPYRITELINDVAVRLELPAG
Sbjct: 1261 KHHRHVAYQVGDWALLRLRQRPTTSLPQSGTGKLKPRFYGPYRITELINDVAVRLELPAG 1320
Query: 1321 ARLHDVFHIGLLKKFXXXXXXXXXXXXXXXXXXIAPEPERAVRFRLARGVRQALVQWKGE 1380
ARLHDVFHIGLLKKF IAPEPERAVRFRLARGVRQALVQWKGE
Sbjct: 1321 ARLHDVFHIGLLKKFHGPPPGAPPALPPLHHGAIAPEPERAVRFRLARGVRQALVQWKGE 1380
Query: 1381 SPASATWEDIEVLRAKYPAXXXXXXXXXXXGGDVMWGKTYTXXXXXXXXXXXXXXXXXXX 1440
SPASATWEDIEVLRAKYPA GGDVMWGKTYT
Sbjct: 1381 SPASATWEDIEVLRAKYPALQLEDELSLEEGGDVMWGKTYTRRHRARDVRRAAERAGARM 1440
Query: 1441 XXXXXVIAGTAHATEDEAISASG 1463
VIAGTAHATEDEAISASG
Sbjct: 1441 DAERAVIAGTAHATEDEAISASG 1463
>Os10g0317000 Retrotransposon gag protein family protein
Length = 1476
Score = 1796 bits (4651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 891/1441 (61%), Positives = 1043/1441 (72%), Gaps = 35/1441 (2%)
Query: 5 TIADLLKEIKNMSAELTSLKADMATMKDKASTAASTE--TRHPDGLRDLDLPPRPKKWDF 62
T+A L +++ S T D S A +TE + G D PP+ + +F
Sbjct: 11 TLAKTLASLQSSSEATTKAIEDNTQAIAALSVARTTEKASTESSGTPAPDRPPKHWRPEF 70
Query: 63 PRYDGTTDPLLFLNKFEAYFRHHRTMAEERVGMASYHLDDVTQTWYTQLLEDEGTPTWGR 122
P+YDG TDPL F+N+ E++F + ER MASY+L D Q WY + ++EGTPTW R
Sbjct: 71 PKYDGKTDPLAFINRCESFFIQQHVIPAERTWMASYNLQDGAQLWYMHVQDNEGTPTWER 130
Query: 123 FKELVNLRFGPPLRSAPLFELSECRRTGTVEEYSNRFQALLPRAGRLDESQRVQLFTGGL 182
FKEL+NLR+GPPLRS PLFELS CRRT TVE+Y +RFQALLPRAGRL+E+Q+VQLFTGGL
Sbjct: 131 FKELLNLRYGPPLRSVPLFELSACRRTSTVEDYQDRFQALLPRAGRLEEAQQVQLFTGGL 190
Query: 183 LPPLSHAVRIHHPETLAAAMSLARQVELMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
LPPLS V+ P +L AMSLARQ ELME
Sbjct: 191 LPPLSLQVQQQKPASLEEAMSLARQFELMEPYLFPATTSARGVLPTPAPRPSTGPVVKPA 250
Query: 243 XXXXXXXXXXXXXXXXXXXNPRRLTPEEMAERCRQGLCFNCNEKFTRGHNRFCRRLFFVD 302
+RL+ + ER R GLC+NC+EK++R HN+ C+RLFFV+
Sbjct: 251 PATVTVEGRPV----------KRLSQAQQEERRRLGLCYNCDEKYSRSHNKVCKRLFFVE 300
Query: 303 GVXXXXXXXXXXXXXXXXXXXXPVFSLHAVAGVPIADTIQLQVTVXXXXXXXXXXXXXTH 362
G PVFSLHAVAG+P+ I LQVT+ TH
Sbjct: 301 GGAIEEGDDTVEDDTEEATVEAPVFSLHAVAGIPLGKPILLQVTLGAASLVALVDTGSTH 360
Query: 363 SFIGEEAARRAGLPIQSSPRMTAIVANGERVACPGVIRDAAFTINGSTFHTDLFVMPLAG 422
+FIGE+AA R GLP+Q PR+TA VANGE+V+CPGV+R A TI G F DL+VMPLAG
Sbjct: 361 NFIGEDAALRTGLPVQPRPRLTATVANGEKVSCPGVLRRAPITIQGMAFDVDLYVMPLAG 420
Query: 423 FDVVLGTRWLGTLGP-IVWDFTSRSMAFQRDGQRFAWKGV----------ASTSTTHLRT 471
+D+VLGT+W+ LG I WD T+ +++FQ G+ +W+ + ST T+ +
Sbjct: 421 YDMVLGTQWMAHLGTTIAWDVTTGTVSFQHQGRTVSWQSLPPHQRADVHAVSTGTSLVAA 480
Query: 472 LAAASGT--------LLDELLVAYEDVFGEPTGLPPPRGRDHAIVLKPSSAPVAVRPYRY 523
++S T LLD LL +++DVF EP GLPPPRGRDHAI L P + PVAVRPYRY
Sbjct: 481 TGSSSSTPAPTTEPALLDGLLGSFDDVFAEPRGLPPPRGRDHAIHLLPGAPPVAVRPYRY 540
Query: 524 PAAHKDELERQCAAMIEQGVVRRSDSPFSSPVLLVKKADGSWRFCVDYRALNALTVKDAF 583
P AHKDELERQCA M+EQG++RRS S FSSPVLLVKKADGSWRFCVDYRALNA+T+KDA+
Sbjct: 541 PVAHKDELERQCAVMMEQGLIRRSTSAFSSPVLLVKKADGSWRFCVDYRALNAITIKDAY 600
Query: 584 PIPVVDEL----HGARFFTKLDLRSGYHQVRMRPEDVHKTAFRTHDGLYEFLVMPFGLCN 639
PIPVVDEL HGA+FFTKLDLRSGYHQVRMR EDV KTAFRTHDGLYEFLVMPFGLCN
Sbjct: 601 PIPVVDELLDELHGAKFFTKLDLRSGYHQVRMRAEDVAKTAFRTHDGLYEFLVMPFGLCN 660
Query: 640 APATFQALMNXXXXXXXXXXXXXXXXXILIYSETWTDHLRHLRTVLSVLRQHRLFVKRSK 699
APATFQALMN ILIYS TW DHLRH+R VL +LRQHRLFVKRSK
Sbjct: 661 APATFQALMNDILRIYLRRFVLVFFDDILIYSNTWADHLRHIRAVLLLLRQHRLFVKRSK 720
Query: 700 CTFGSPSVSYLGHVISEAGVAMDPAKVQAIHEWLVPRSARAVRSFLGLAGYYRKFVHNYG 759
C FG S+SYLGH+I GV+MDPAKVQA+ +W PRSAR VR FLGLAGYYRKFVH+YG
Sbjct: 721 CAFGVSSISYLGHIIGATGVSMDPAKVQAVVDWPQPRSARTVRGFLGLAGYYRKFVHDYG 780
Query: 760 TIAAPLTALTKKDGFSWTEDTXXXXXXXXXXVTSAPVLAMPDFAKPFTVEGDASTHGFGA 819
TIAAPLTALTKK+GF W+++ VT+APVLA+PDF KPF VE DASTHGFGA
Sbjct: 781 TIAAPLTALTKKEGFRWSDEVATAFHALKHAVTTAPVLALPDFVKPFVVECDASTHGFGA 840
Query: 820 VLVQDGHPVAFFSRPVVLRHRALAAYERELIGLVHAVRHWRPYLWGRRFVVKTDHYSLKY 879
VL+QD HP+AFFSRPV RHRALAAYERELIGLV A+RHWRPYLWGR FVV+TDHYSLKY
Sbjct: 841 VLLQDKHPLAFFSRPVAPRHRALAAYERELIGLVLAIRHWRPYLWGRAFVVRTDHYSLKY 900
Query: 880 LLDQRLATIPQHHWVGKLLGFDFAVEYKPGAANTVADALSRRDTEEGAILALSAPRFDFI 939
LLDQRLATIPQHHWVGKLLGFDF VEYK GA+N VADALSRRDT+EGA+LALSAPRFD+I
Sbjct: 901 LLDQRLATIPQHHWVGKLLGFDFTVEYKSGASNVVADALSRRDTDEGAVLALSAPRFDYI 960
Query: 940 SKLHDAQRQDPALTALRDEVSAGTRTGPWALVDDLLQYNSWLYIPPASPLAREIIEATHE 999
+L AQ +PAL A+RD + AGTR+ PWAL D ++ ++S LYIPP+SPL EI+ A H
Sbjct: 961 ERLRAAQTTEPALVAIRDAIQAGTRSAPWALRDGMVMFDSRLYIPPSSPLLHEILAAIHT 1020
Query: 1000 DGHEGVKRTMHRLRREFHIPNMKQLVQDWVRSCAVCQRYKSEHXXXXXXXXXXXXXQGVW 1059
DGHEGV+RT+HRLRR+FH P M+++VQ++VR+C CQR KSEH VW
Sbjct: 1021 DGHEGVQRTLHRLRRDFHSPAMRRVVQEFVRACDTCQRNKSEHLHPGGLLLPLPVPTTVW 1080
Query: 1060 TDIALDFIEALPRVRGKSVILTVVDRFSKYCHFIPLAHPYSAESVAQAFFAEIVHLHGVP 1119
DI LDF+EALPRV GK+VILTVVDRFSKYCHFIPLAHPY+AESVAQAF+A+IV LHG+P
Sbjct: 1081 ADIGLDFVEALPRVGGKTVILTVVDRFSKYCHFIPLAHPYTAESVAQAFYADIVRLHGIP 1140
Query: 1120 QSMVSDRDPIFTSTFWRELMRLMGTKLHMTTAFHPQSDGQSEAANRVIIMYLRCLTGDRP 1179
QSMVSDRDP+FTS+FWRELMRL GTK+HMTTA HPQSDGQ+EAAN+VI+MYLRC TGDRP
Sbjct: 1141 QSMVSDRDPVFTSSFWRELMRLTGTKMHMTTAIHPQSDGQTEAANKVIVMYLRCFTGDRP 1200
Query: 1180 RQWLRWLPWAEFIFNTAYQSSLRDTPFRVVYGRDPPSIRSYEAGDTRVAAVAKSMEERAE 1239
RQW+RWLPWAE+I+NTAYQ+SLRDTPFRVVYGRDPP IRSYE G+TRVAAVA+SM +R E
Sbjct: 1201 RQWVRWLPWAEYIYNTAYQTSLRDTPFRVVYGRDPPIIRSYEPGETRVAAVARSMADRDE 1260
Query: 1240 FLFDIRYRLEQAQAVQKLHYDKHHRHVAYQVGDWALLRLRQRPTTSLPQSGTGKLKPRFY 1299
FL D+RYRLEQAQA K +YDK HR V+Y+VGD LLRLR R SLPQ GKLKPR++
Sbjct: 1261 FLADVRYRLEQAQATHKKYYDKGHRAVSYEVGDLVLLRLRHRAPASLPQVSKGKLKPRYF 1320
Query: 1300 GPYRITELINDVAVRLELPAGARLHDVFHIGLLKKFXXXXXXXXXXXXXXXXXXIAPEPE 1359
GPYR+ E+IN VAVRLELP A+LHDVFH+GLLKKF I PEPE
Sbjct: 1321 GPYRVVEVINPVAVRLELPPRAKLHDVFHVGLLKKFVGAAPPSPPALPAVHHGAIDPEPE 1380
Query: 1360 RAVRFRLARGVRQALVQWKGESPASATWEDIEVLRAKYPAXXXXXXXXXXXGGDVMWGKT 1419
R R RLARGVRQ LV WKGES ASATWED++ + +YPA G DVMWG+T
Sbjct: 1381 RVTRSRLARGVRQVLVHWKGESAASATWEDLDTFKERYPAFQLEDELALEEGRDVMWGRT 1440
Query: 1420 Y 1420
Y
Sbjct: 1441 Y 1441
>Os06g0493000 RNA-directed DNA polymerase (Reverse transcriptase) domain containing
protein
Length = 866
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/864 (40%), Positives = 501/864 (57%), Gaps = 15/864 (1%)
Query: 549 SPFSSPVLLVKKADGSWRFCVDYRALNALTVKDAFPIPVV----DELHGARFFTKLDLRS 604
SP+SSP +LVKK DG+WR CVDYR LNA T+K+ +PIPV+ DEL GA+ F+K+DLRS
Sbjct: 2 SPYSSPAILVKKKDGTWRLCVDYRQLNASTIKNKYPIPVIEDLLDELQGAQIFSKIDLRS 61
Query: 605 GYHQVRMRPEDVHKTAFRTHDGLYEFLVMPFGLCNAPATFQALMNXXXXXXXXXXXXXXX 664
GYHQ+RM DVHKTAF TH G +E+LVMPFGL NAPATFQALMN
Sbjct: 62 GYHQIRMHAADVHKTAFSTHLGHFEYLVMPFGLTNAPATFQALMNKILAPYLRKFVLVFF 121
Query: 665 XXILIYSETWTDHLRHLRTVLSVLRQHRLFVKRSKCTFGSPSVSYLGHVISEAGVAMDPA 724
ILIYS++ T+H +HL VL +LR H+LF K SKC FG V YLG++IS +GVA DP
Sbjct: 122 DDILIYSKSATEHAQHLSLVLQLLRHHQLFAKPSKCVFGQDQVEYLGYIISSSGVATDPV 181
Query: 725 KVQAIHEWLVPRSARAVRSFLGLAGYYRKFVHNYGTIAAPLTALTKKDGFSWTEDTXXXX 784
KVQA+ W P S +R FLGLAGYYR+F+ N+G I P+ KK+ F W E
Sbjct: 182 KVQAVQNWPTPTSITELRGFLGLAGYYRRFIKNFGIICRPMFDALKKNNFHWQEVQQQAF 241
Query: 785 XXXXXXVTSAPVLAMPDFAKPFTVEGDASTHGFGAVLVQDGHPVAFFSRPVVLRHRALAA 844
+ APVLAMPDF+ PF +E DAS HG GAVL+Q+G P+A+ S+ + + AL+
Sbjct: 242 DAIKLQLAQAPVLAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLSKAIGPKAAALST 301
Query: 845 YERELIGLVHAVRHWRPYLWGRRFVVKTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFAV 904
Y++E + ++ A++ W+ Y G +++TD SLKY+ +QR+ QH + KLL +D+ +
Sbjct: 302 YDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIKLLSYDYKI 361
Query: 905 EYKPGAANTVADALSRRDTEEGAILALSAPRFDFISKLHDAQRQDPALTALRDEVSAGTR 964
EYK G N ADALSR + P++ I+++ + DP L + +
Sbjct: 362 EYKKGQENKAADALSRMQQLNALTTTVIVPQW--ITEVAASYSTDPKCHELESHLHIAPQ 419
Query: 965 TGP-WALVDDLLQYNSWLYIPPASPLAREIIEATHED---GHEGVKRTMHRLRREFHIPN 1020
+ P + L +L+Y + + + L +++ + H+ GH G + T R+++ F+ P
Sbjct: 420 SHPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPG 479
Query: 1021 MKQLVQDWVRSCAVCQRYKSEHXXXXXXXXXXXXXQGVWTDIALDFIEALPRVRGKSVIL 1080
MK V +V++C VCQ+ K+EH + W+ I +DF+E LP+ GK VI
Sbjct: 480 MKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIW 539
Query: 1081 TVVDRFSKYCHFIPLAHPYSAESVAQAFFAEIVHLHGVPQSMVSDRDPIFTSTFWRELMR 1140
+VDRF+KY HFIPL+HP++A+ + F LHG+P +VSDRD IFTS+ W+E+
Sbjct: 540 VIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFE 599
Query: 1141 LMGTKLHMTTAFHPQSDGQSEAANRVIIMYLRCLTGDRPRQWLRWLPWAEFIFNTAYQSS 1200
G KLH ++A+HPQ+DGQSE N+ + YLRC+T +PR+W LP AE+ +NT + +S
Sbjct: 600 KAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTS 659
Query: 1201 LRDTPFRVVYGRDPPSIRSYEAGDTRVAAVAKSMEERAEFLFDIRYRLEQAQAVQKLHYD 1260
L +P++ ++G PP + + + E +A L I+ L +AQA K D
Sbjct: 660 LGMSPYQALHGIKPPLLAELLLPGSLLEGERNKQEAKAALLETIKSHLVKAQARMKYFAD 719
Query: 1261 KHHRHVAYQVGDWALLRLRQRPTTSLPQSGTGKLKPRFYGPYRITELINDVAVRLELPAG 1320
+H + +VGD L+++ SL + KL R+YGP+R+ E I VA +L LP
Sbjct: 720 QHRQERTLEVGDMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVT 779
Query: 1321 ARLHDVFHIGLLKK-FXXXXXXXXXXXXXXXXXXIAPEPERAVRFRLARGVRQALVQWK- 1378
+++H VFH+ LKK I P + RL + +VQWK
Sbjct: 780 SQIHHVFHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKI 839
Query: 1379 --GESPAS-ATWEDIEVLRAKYPA 1399
P S ATWED + +P+
Sbjct: 840 HWANLPESAATWEDAAFITKVFPS 863
>Os04g0389000 Integrase, catalytic region domain containing protein
Length = 538
Score = 554 bits (1427), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/495 (53%), Positives = 336/495 (67%)
Query: 904 VEYKPGAANTVADALSRRDTEEGAILALSAPRFDFISKLHDAQRQDPALTALRDEVSAGT 963
VEYKPG N VADALSRRD LALSAP+F +L P LTA+RD+++ G+
Sbjct: 1 VEYKPGTTNVVADALSRRDEHLAEALALSAPQFSLFDELRHEVLTSPELTAIRDDIAKGS 60
Query: 964 RTGPWALVDDLLQYNSWLYIPPASPLAREIIEATHEDGHEGVKRTMHRLRREFHIPNMKQ 1023
+ WA D L+ + +++ +SP I+E H GHEG + T+ RLR +FH+ +
Sbjct: 61 KPPAWAFTDGLITFKGRIFVSASSPSLPAILELAHGLGHEGTQNTLSRLRADFHLARDRA 120
Query: 1024 LVQDWVRSCAVCQRYKSEHXXXXXXXXXXXXXQGVWTDIALDFIEALPRVRGKSVILTVV 1083
+VQ+ R+C CQ+ K+EH VW DIA+DF+E LPRV GK+VILTVV
Sbjct: 121 VVQEHARACFTCQQNKTEHLQPAGLLQSLPVPSAVWADIAMDFVEGLPRVHGKTVILTVV 180
Query: 1084 DRFSKYCHFIPLAHPYSAESVAQAFFAEIVHLHGVPQSMVSDRDPIFTSTFWRELMRLMG 1143
DRFSK+ HFIP+AHPY+A SVA AFF+EIV LHGVP S+VSDRDP+FTSTFWREL RL G
Sbjct: 181 DRFSKFAHFIPMAHPYTATSVAAAFFSEIVRLHGVPASIVSDRDPVFTSTFWRELFRLAG 240
Query: 1144 TKLHMTTAFHPQSDGQSEAANRVIIMYLRCLTGDRPRQWLRWLPWAEFIFNTAYQSSLRD 1203
+L++++AFHPQSDGQSE N++I MYLRCLTGDRPR WLRWLPWAE+ +NT+YQSSLR
Sbjct: 241 VRLNLSSAFHPQSDGQSEVTNKIIAMYLRCLTGDRPRHWLRWLPWAEYCYNTSYQSSLRT 300
Query: 1204 TPFRVVYGRDPPSIRSYEAGDTRVAAVAKSMEERAEFLFDIRYRLEQAQAVQKLHYDKHH 1263
+PFRVVYGR+PP++R+YE G TR+ AV ++M++R EFL +IR RLEQAQ K YD H
Sbjct: 301 SPFRVVYGREPPTLRAYEPGSTRLLAVQQAMQDRDEFLREIRDRLEQAQQTHKSAYDGKH 360
Query: 1264 RHVAYQVGDWALLRLRQRPTTSLPQSGTGKLKPRFYGPYRITELINDVAVRLELPAGARL 1323
R + + VGDW LRL RP SL +G GKL P+FYG YR+ E I VA RL+LP GARL
Sbjct: 361 RALEFSVGDWLWLRLLHRPIASLGVTGRGKLGPKFYGLYRVAERIGSVAYRLQLPPGARL 420
Query: 1324 HDVFHIGLLKKFXXXXXXXXXXXXXXXXXXIAPEPERAVRFRLARGVRQALVQWKGESPA 1383
HDVFH+ LLK F + +P + RLARGVRQ LVQWK + A
Sbjct: 421 HDVFHVRLLKPFCGTPPDSVPPLPPIQHGQVCLQPAAVTQSRLARGVRQVLVQWKDKPSA 480
Query: 1384 SATWEDIEVLRAKYP 1398
A+W ++ R +P
Sbjct: 481 EASWMPLDEFRTLHP 495
>Os08g0123950 Integrase, catalytic region domain containing protein
Length = 783
Score = 482 bits (1241), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/701 (37%), Positives = 387/701 (55%), Gaps = 11/701 (1%)
Query: 707 VSYLGHVISEAGVAMDPAKVQAIHEWLVPRSARAVRSFLGLAGYYRKFVHNYGTIAAPLT 766
+SYLGH+I GVA DP KVQ I W +P + + +R FLGLAGYYRKFV +G + PLT
Sbjct: 3 LSYLGHIIGANGVATDPQKVQDILNWEIPTNVKKLRGFLGLAGYYRKFVQGFGLKSKPLT 62
Query: 767 ALTKKD-GFSWTEDTXXXXXXXXXXVTSAPVLAMPDFAKPFTVEGDASTHGFGAVLVQDG 825
L +K F W+ + + SAPVLA+P+F K F VE DAS +G GAVL Q+
Sbjct: 63 NLLRKGVPFVWSTEADSAFQALKTSLASAPVLALPNFQKTFVVETDASDYGIGAVLSQEK 122
Query: 826 HPVAFFSRPVVLRHRALAAYERELIGLVHAVRHWRPYLWGRRFVVKTDHYSLKYLLDQRL 885
HP+A+ S+ + R R L+ YE+E + ++ AV HWR YL F++ TDH+SL +L DQRL
Sbjct: 123 HPIAYISKALGPRTRGLSTYEKECLAMIMAVDHWRSYLQHVEFIILTDHHSLMHLSDQRL 182
Query: 886 ATIPQHHWVGKLLGFDFAVEYKPGAANTVADALSRRDTE-EGAILALSAPRFDFISKLHD 944
T QH KLLG + + Y+ G+ N ADALSR+ + E A+S ++ ++
Sbjct: 183 HTPWQHKAFTKLLGLQYKICYRKGSTNAAADALSRKPQQSEEEFNAISQCVPQWLMEVLQ 242
Query: 945 AQRQDPALTALRDEVSAGTRTGP-WALVDDLLQYNSWLYIPPASPLAREIIEATHED--- 1000
+ DP T L ++ + P ++L +L+Y ++I + L +II H
Sbjct: 243 SYDTDPHATQLVAALTLNPNSKPHFSLQHGVLRYKGNIWIGNSPDLQLKIINEMHASPVG 302
Query: 1001 GHEGVKRTMHRLRREFHIPNMKQLVQDWVRSCAVCQRYKSEHXXXXXXXXXXXXXQGVWT 1060
GH G T R+++ F MK +++ + +C +C + K + +G W
Sbjct: 303 GHSGFPVTYRRIKQLFAWNGMKSQIKETLANCQICAQAKPDRSRYPRLLQPLPVPKGAWQ 362
Query: 1061 DIALDFIEALPRVRGKSVILTVVDRFSKYCHFIPLAHPYSAESVAQAFFAEIVHLHGVPQ 1120
I+LDFIE LPR + IL VVD+FSKY HFIPL HP++A VA+AF + + LHG+PQ
Sbjct: 363 TISLDFIEGLPRSSHYNCILVVVDKFSKYSHFIPLRHPFTAIDVAKAFMSNVYKLHGLPQ 422
Query: 1121 SMVSDRDPIFTSTFWRELMRLMGTKLHMTTAFHPQSDGQSEAANRVIIMYLRCLTGDRPR 1180
++SDRD IFTS W +L GTKLH ++A+HPQSDGQ+E N+ + +YL+C P
Sbjct: 423 IIISDRDKIFTSQLWEQLFLRSGTKLHYSSAYHPQSDGQTERGNQCLEIYLKCFVQSAPS 482
Query: 1181 QWLRWLPWAEFIFNTAYQSSLRDTPFRVVYGRDPPSIRSYEAGDTRVAAVAKSMEERAEF 1240
+W WL AE+ +N +Y S++ TPF +YG PP D + + M++R
Sbjct: 483 KWPSWLHLAEYWYNNSYHSTIDRTPFEALYGY-PPRHFGISIRDCDNSELITWMQDRKLM 541
Query: 1241 LFDIRYRLEQAQAVQKLHYDKHHRHVAYQVGDWALLRLRQRPTTSLPQSGTGKLKPRFYG 1300
++ L +AQ KL DK +QVG+W L+L+ +S+ KL +++G
Sbjct: 542 QQLVQQHLHRAQQQMKLFADKKRSFRQFQVGEWVYLKLQPYVQSSVAPRANHKLAFKYFG 601
Query: 1301 PYRITELINDVAVRLELPAGARLHDVFHIGLLKK---FXXXXXXXXXXXXXXXXXXIAPE 1357
P++I E + VA +L+LPA + +H VFH+ LLK+ F IA
Sbjct: 602 PFQILEKLGTVAYKLQLPATSSIHPVFHVSLLKEAKGFQPSVHTPLSPTYSAVQYPIALL 661
Query: 1358 PERAVRFRLARGVRQALVQWKGESPASATWEDIEVLRAKYP 1398
R + + V Q L W PA ATWED+ L+A++P
Sbjct: 662 DHRLTK-KGNHTVHQVLTHWSDTIPAQATWEDLHDLKARFP 701
>Os08g0164800 RNA-directed DNA polymerase (Reverse transcriptase) domain
containing protein
Length = 620
Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/549 (41%), Positives = 319/549 (58%), Gaps = 32/549 (5%)
Query: 411 FHTDLFVMPLAGFDVVLGTRWLGTLGPIVWDFTSRSMAFQRDGQRFAWKGV--------- 461
F ++PL G++++LG W+ T PI D R + ++ Q+ +
Sbjct: 3 FSNGFNLIPLKGYEIILGADWIFTHSPITLDLKQRELVITKEKQKIILQDFTKPGKRARV 62
Query: 462 ------------ASTSTTHLRTLAAASGTL-------LDELLVAYEDVFGEPTGLPPPRG 502
A + T++ + E+L+ + V EP GLPP R
Sbjct: 63 GEKKMGKLIRKGAVGCVIQIHTISVEKENEKHVIPPEIQEILLKFPQVLKEPQGLPPRRK 122
Query: 503 RDHAIVLKPSSAPVAVRPYRYPAAHKDELERQCAAMIEQGVVRRSDSPFSSPVLLVKKAD 562
DH I LK S P +RPYR P K+ +E A +I+ ++ SDSP+SSP ++V+K D
Sbjct: 123 CDHTINLKTGSDPPNLRPYRVPHYQKESMENIIAELIQSQEIQISDSPYSSPAVMVRKKD 182
Query: 563 GSWRFCVDYRALNALTVKDAFPIPVV----DELHGARFFTKLDLRSGYHQVRMRPEDVHK 618
GSWR CVDYR LN T+K+ FP+P++ DELHG+R F+KLDLRSGYHQ+RM P+DVHK
Sbjct: 183 GSWRLCVDYRQLNGQTIKNKFPMPIIEDLLDELHGSRVFSKLDLRSGYHQIRMHPDDVHK 242
Query: 619 TAFRTHDGLYEFLVMPFGLCNAPATFQALMNXXXXXXXXXXXXXXXXXILIYSETWTDHL 678
TAFRTH G YE+ VMPFGL NAPATFQALMN ILIYS+ +HL
Sbjct: 243 TAFRTHLGHYEYNVMPFGLTNAPATFQALMNQVLAPYLRKFVLVFFDDILIYSKNKEEHL 302
Query: 679 RHLRTVLSVLRQHRLFVKRSKCTFGSPSVSYLGHVISEAGVAMDPAKVQAIHEWLVPRSA 738
H++ V+ L + L +K KC FG ++YLGH+IS GVA DP KV+ I +P +
Sbjct: 303 EHIKLVMQALLDNHLVIKLKKCEFGLDRIAYLGHIISSEGVATDPEKVEGIRRRKIPNNI 362
Query: 739 RAVRSFLGLAGYYRKFVHNYGTIAAPLTALTKKDGFSWTEDTXXXXXXXXXXVTSAPVLA 798
+R FLG+AGYYR+F+ YG I PL + +KD F W + ++++PVL
Sbjct: 363 TELREFLGMAGYYRRFIKGYGVICRPLHDMLRKDAFQWGPEQTTAFEELKLRLSTSPVLT 422
Query: 799 MPDFAKPFTVEGDASTHGFGAVLVQDGHPVAFFSRPVVLRHRALAAYERELIGLVHAVRH 858
MPDF++PF +E DA G GAVL+Q G P+A+ S+ + + A + YE+E + ++ A++
Sbjct: 423 MPDFSQPFVIEADACNTGIGAVLMQTGKPIAYLSKALGPKAAAQSIYEKEAMAILEALKK 482
Query: 859 WRPYLWGRRFVVKTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFAVEYKPGAANTVADAL 918
WR Y+ G + V+KTD SLKY+++QRL QH + K++ +D+++EYK G N VADAL
Sbjct: 483 WRHYILGNKLVIKTDQQSLKYMMNQRLVEGIQHKLLLKMMEYDYSIEYKAGKENLVADAL 542
Query: 919 SRRDTEEGA 927
SR E
Sbjct: 543 SRGKISEAV 551
>Os08g0451600 Peptidase aspartic, catalytic domain containing protein
Length = 707
Score = 457 bits (1177), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/624 (39%), Positives = 342/624 (54%), Gaps = 39/624 (6%)
Query: 277 QGLCFNCNEKFTRGHNRFCR-----RLFFVDGVXXXXXXXXXXXXXXXXXXXXPVFSLHA 331
GLCF C +K++ H C + V V SL++
Sbjct: 86 NGLCFKCGDKYSPEHQ--CALGGQIKAMQVTEVIPDDLLNAVTAEEDSDQDENCHISLNS 143
Query: 332 VAGVPIADTIQLQVTVXXXXXXXXXXXXXTHSFIGEEAARRAGLPIQSSPRMTAIVANGE 391
++G +TI+L+ V +HSF+ A+ GL +Q VANG+
Sbjct: 144 LSGASHVNTIRLRALVQNKVLLLLVDSGSSHSFLDYNFAQLLGLQLQPIAPSLVKVANGD 203
Query: 392 RVACPGVIRDAAFTINGSTFHTDLFVMPLAGFDVVLGTRWLGTLGPIVWDFTSRSMAFQR 451
+ C ++ + G TF D+ V+PL G D +LG WL G + ++ ++++ F
Sbjct: 204 CIHCQFMVPQFTWWFQGRTFTYDMRVVPLGGHDAILGMDWLAQWGDMSCNWANKTLKFMY 263
Query: 452 DGQRFAWKGVA-STSTTHLRTLAAA------------SGTLLD---------------EL 483
G +GV S T L ++ + + LL+ +L
Sbjct: 264 QGTWVELQGVPDSPPQTELSAMSLSQVLKCQKGCDIWAAALLETADFPSADSVPPAVSQL 323
Query: 484 LVAYEDVFGEPTGLPPPRGRDHAIVLKPSSAPVAVRPYRYPAAHKDELERQCAAMIEQGV 543
+ + DVF +P LPP R DHAI L P SAPV +PYRY KDE+E Q MI+ G+
Sbjct: 324 VHEFADVFQDPHSLPPHRVYDHAITLFPGSAPVNSKPYRYSPLQKDEIESQVKDMIDSGL 383
Query: 544 VRRSDSPFSSPVLLVKKADGSWRFCVDYRALNALTVKDAFPIPVVDEL----HGARFFTK 599
+ S SPF+SPVLLVKK DG+WRFCVDYR LN++TVK FP+P+VDEL G RFF+K
Sbjct: 384 ITPSMSPFASPVLLVKKKDGTWRFCVDYRKLNSITVKSKFPMPIVDELLDELAGTRFFSK 443
Query: 600 LDLRSGYHQVRMRPEDVHKTAFRTHDGLYEFLVMPFGLCNAPATFQALMNXXXXXXXXXX 659
LDL++GYHQ+ M +D +KTAF+TH G ++F VMPFGL NAP+TFQ +MN
Sbjct: 444 LDLKAGYHQIWMVEDDEYKTAFKTHHGQFQFHVMPFGLTNAPSTFQCVMNSVFAPLIRKY 503
Query: 660 XXXXXXXILIYSETWTDHLRHLRTVLSVLRQHRLFVKRSKCTFGSPSVSYLGHVISEAGV 719
IL+YS HL HL+ V +LRQH+L+ KRSKC+F + YLGH+IS+ GV
Sbjct: 504 VLVFMDDILVYSPDLPSHLTHLKQVFELLRQHKLYAKRSKCSFACSQLEYLGHIISDQGV 563
Query: 720 AMDPAKVQAIHEWLVPRSARAVRSFLGLAGYYRKFVHNYGTIAAPLTALTKKDGFSWTED 779
+ DP K A+ W VP + +R FLGL GYYRKFV NY +A PLT L +K F W++D
Sbjct: 564 STDPTKTAAMLAWPVPANVTELRGFLGLTGYYRKFVKNYSILAKPLTVLLQKKAFQWSDD 623
Query: 780 TXXXXXXXXXXVTSAPVLAMPDFAKPFTVEGDASTHGFGAVLVQDGHPVAFFSRPVVLRH 839
++S PVLA+PDF++PF +E DA G GAVL Q HP+A++S+ + + +
Sbjct: 624 AQQAFQKLKLAMSSTPVLALPDFSQPFILETDACAFGVGAVLSQHNHPIAYYSKTLGVAN 683
Query: 840 RALAAYERELIGLVHAVRHWRPYL 863
+ L+ YE+E + ++ AV WR YL
Sbjct: 684 QKLSIYEKEFLVIMMAVDKWRCYL 707
>Os07g0510800 RNA-directed DNA polymerase (Reverse transcriptase) domain containing
protein
Length = 517
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/514 (46%), Positives = 326/514 (63%), Gaps = 10/514 (1%)
Query: 538 MIEQGVVRRSDSPFSSPVLLVKKADGSWRFCVDYRALNALTVKDAFPIPVVDEL----HG 593
M+ QGV++ S SPFSSPVLLV K D +WRFC+DYR LNA+TVK+ +P+PV+DEL G
Sbjct: 1 MLRQGVIQPSSSPFSSPVLLVLKKDLTWRFCIDYRHLNAITVKNRYPLPVIDELLDDLAG 60
Query: 594 ARFFTKLDLRSGYHQVRMRPEDVHKTAFRTHDGLYEFLVMPFGLCNAPATFQALMNXXXX 653
A FT LDLR+GYH++RMRPED HKTAF+TH G YEF VM +GL APATFQ +MN
Sbjct: 61 ATIFTSLDLRAGYHKIRMRPEDEHKTAFKTHHGHYEFRVMSYGLTGAPATFQGVMNTVLS 120
Query: 654 XXXXXXXXXXXXXILIYSETWTDHLRHLRTVLSVLRQHRLFVKRSKCTFGSPSVSYLGHV 713
ILIYS T T+H++ LR V +L +H+L VKRSKC+F S+ YLGHV
Sbjct: 121 PLLRKGVLVFIDDILIYSATLTEHVQLLRQVFQLLTEHQLKVKRSKCSFAQSSLIYLGHV 180
Query: 714 ISEAGVAMDPAKVQAIHEWLVPRSARAVRSFLGLAGYYRKFVHNYGTIAAPLTALTKKDG 773
IS AGV+ DP + A+ W VP + + VR FLGLAGYYRKFV ++G I+ PLT L KK+
Sbjct: 181 ISHAGVSTDPKNILAVQRWPVPTNVKEVRGFLGLAGYYRKFVRHFGVISRPLTDLLKKNV 240
Query: 774 -FSWTEDTXXXXXXXXXXVTSAPVLAMPDFAKPFTVEGDASTHGFGAVLVQDGHPVAFFS 832
F WT +TSAPVLA+PDF+KPF +E DAS G GAVL+Q GHP+AF S
Sbjct: 241 VFVWTISHQQAFEALKSALTSAPVLAIPDFSKPFEIETDASDKGVGAVLMQAGHPLAFLS 300
Query: 833 RPVVLRHRALAAYERELIGLVHAVRHWRPYLWGRRFVVKTDHYSLKYLLDQRLATIPQHH 892
+ + R+R L+ YE+E + ++ AV WR YL FV++TD SL +L DQ+LAT Q
Sbjct: 301 KALGPRNRGLSIYEKECLAILLAVDRWRSYLQFGEFVIRTDQRSLIHLGDQKLATPWQQK 360
Query: 893 WVGKLLGFDFAVEYKPGAANTVADALSRRDTEEG-AILALSAPRFDFISKLHDAQRQDPA 951
+ KLLG ++ + YK G N ADALSR T++ ALS D+++++ + DP
Sbjct: 361 AMTKLLGLNYRLVYKRGLDNRAADALSRCSTDDHIQACALSVCIPDWLTEVQEGYLSDPY 420
Query: 952 LTALRDEVSAGTRTGP-WALVDDLLQYNSWLYIPPASPLAREIIEATHE---DGHEGVKR 1007
L +V+ P ++L D +L Y + ++I + L I+ A H GH GV+
Sbjct: 421 SADLLSKVTLQASAVPNFSLRDGILHYKNKIWIGNNTTLQHRILSALHSGAIGGHSGVQV 480
Query: 1008 TMHRLRREFHIPNMKQLVQDWVRSCAVCQRYKSE 1041
T R+++ F +K+ V +++ C+VC++ K+E
Sbjct: 481 TYSRIKKLFAWQGLKKSVLEFIDQCSVCKQAKAE 514
>Os12g0121200 Peptidase aspartic, catalytic domain containing protein
Length = 461
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/365 (53%), Positives = 241/365 (66%), Gaps = 5/365 (1%)
Query: 361 THSFIGEEAARRAGLPIQSSPRMTAIVANGERVACPGVIRDAAFTINGSTFHTDLFVMPL 420
TH+FI + A +AG+P+Q P ++ VANG+RV PG +I F D + +PL
Sbjct: 22 THNFINDAIAHQAGVPLQRRPGLSVAVANGDRVPSPGRCPPQRVSIGSHEFDIDFYALPL 81
Query: 421 AGFDVVLGTRWLGTLGPIVWDFTSRSMAFQRDGQRFAWKGV-ASTSTTHLRTLAAASGTL 479
G+D+VLG +WLGTLGP +WDF+ +S+AF R W + A+ + H + G L
Sbjct: 82 GGYDIVLGAQWLGTLGPTLWDFSRQSLAFGPAHDRVTWTSIDAAPAPAHAAAIDGQPGDL 141
Query: 480 LDELLVAYEDVFGEPTGLPPPRGRDHAIVLKPSSAPVAVRPYRYPAAHKDELERQCAAMI 539
+ +LL ++D+F EP GL P R H I L+ + VAV PYRY KDELERQC M+
Sbjct: 142 MTDLLDVFKDLFTEPHGLSPERHLCHRIRLEAGVSAVAVGPYRYAHIQKDELERQCDDML 201
Query: 540 EQGVVRRSDSPFSSPVLLVKKADGSWRFCVDYRALNALTVKDAFPIPVV----DELHGAR 595
GV+R S S FSSP LL+KK DGSWRFCVDYRALN T+KD FPIPV DEL GA+
Sbjct: 202 RHGVIRPSSSAFSSPALLIKKRDGSWRFCVDYRALNDKTIKDKFPIPVAEELFDELRGAK 261
Query: 596 FFTKLDLRSGYHQVRMRPEDVHKTAFRTHDGLYEFLVMPFGLCNAPATFQALMNXXXXXX 655
FFTKLD+RSGYHQV M P+DVHKTAFRTH GL+EFLVMPFGL NAPATFQALMN
Sbjct: 262 FFTKLDMRSGYHQVLMHPDDVHKTAFRTHQGLFEFLVMPFGLTNAPATFQALMNDVLLPF 321
Query: 656 XXXXXXXXXXXILIYSETWTDHLRHLRTVLSVLRQHRLFVKRSKCTFGSPSVSYLGHVIS 715
ILIYS +W++HLRH+RTVL L+ H L +KRSKC FG SV+YLGHV+S
Sbjct: 322 LRRFVLVFFDDILIYSSSWSEHLRHVRTVLQTLQDHCLHLKRSKCEFGLTSVAYLGHVLS 381
Query: 716 EAGVA 720
+
Sbjct: 382 SPSTS 386
>Os09g0491900 Integrase, catalytic region domain containing protein
Length = 681
Score = 277 bits (709), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 261/527 (49%), Gaps = 28/527 (5%)
Query: 822 VQDGHPVAFFSRPVVLRHRALAAYERELIGLVHAVRHWRPYLWGRRFVVKTDHYSLKYLL 881
+Q+G PVA+FS + + Y++EL LV A+ W+ YLW + FV+ +DH +LKYL
Sbjct: 1 MQNGQPVAYFSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLK 60
Query: 882 DQRLATIPQHHWVGKLLGFDFAVEYKPGAANTVADALSRRDTEEGAILALSAPRFDFISK 941
Q WV + F + V+YK G N VADALSR++ L + P + I +
Sbjct: 61 GQAKLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQ-LEVKVPGIESIKE 119
Query: 942 LHDAQRQDPALTALRDEVSAGTRTGPWALVDDLLQYNSWLYIPPASPLAREIIEATHEDG 1001
L+ A D + + +AG + + D L + L +P S + +++ TH G
Sbjct: 120 LYPA---DLDFSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCS-VRLLLLQETHAGG 175
Query: 1002 ---HEGVKRTMHRLRREFHIPNMKQLVQDWVRSCAVCQRYKSEHXXXXXXXXXXXXXQGV 1058
H G ++T L F+ P M++ VQ V+ C C + KS+
Sbjct: 176 LMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSK-LNPHGLYTPLPVPSAP 234
Query: 1059 WTDIALDFIEALPRV-RGKSVILTVVDRFSKYCHFIPLAHPYSAESVAQAFFAEIVHLHG 1117
W DI++DF+ LPR RG+ I VVDRFSK HFIP A +A FF+EIV LHG
Sbjct: 235 WEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHG 294
Query: 1118 VPQSMVSDRDPIFTSTFWRELMRLMGTKLHMTTAFHPQSDGQSEAANRVIIMYLRCLTGD 1177
+P+++VSDRD F S FW+ L +GT+L +T HPQ+DGQ+E NR + M LR L
Sbjct: 295 MPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKK 354
Query: 1178 RPRQWLRWLPWAEFIFNTAYQSSLRDTPFRVVYGRDP---------PSIRSYEAGDTRVA 1228
++W LP EF +N A S+ PF VVYG P P + ++ A
Sbjct: 355 NLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLAPIDLLPLPLQERSDMEASKHA 414
Query: 1229 AVAKSMEERAEFLFDIRYRLEQAQAVQKLHYDKHHRHVAYQVGDWALLRLRQRPTTSLPQ 1288
K + E+ + + R + A A +K + V ++ GD + LR+ PQ
Sbjct: 415 TYVKKIHEKTKEAIEKRSKYYAAWA------NKDRKKVTFEPGDLVWVHLRK---DRFPQ 465
Query: 1289 SGTGKLKPRFYGPYRITELINDVAVRLELPAGARLHDVFHIGLLKKF 1335
KL PR GP+R+ IND A ++ELP + F++ L F
Sbjct: 466 KRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSPTFNVADLTPF 512
>Os06g0266100 Integrase, catalytic region domain containing protein
Length = 399
Score = 245 bits (626), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 189/335 (56%), Gaps = 5/335 (1%)
Query: 1067 IEALPRVRGKSVILTVVDRFSKYCHFIPLAHPYSAESVAQAFFAEIVHLHGVPQSMVSDR 1126
IE LPR + IL VVD+FSKY HF+PL+HP++A VA+ F I LHG+PQ+++SDR
Sbjct: 1 IEGLPRSSSYNCILVVVDKFSKYGHFLPLSHPFTAIDVAKTFMLNIYKLHGLPQTIISDR 60
Query: 1127 DPIFTSTFWRELMRLMGTKLHMTTAFHPQSDGQSEAANRVIIMYLRCLTGDRPRQWLRWL 1186
D IFTS W +L GT+LH++TA+HPQSDGQ+E N+ + +YLRC T P +W WL
Sbjct: 61 DKIFTSQLWEQLFTRSGTQLHLSTAYHPQSDGQTERVNQCLEIYLRCFTHATPSKWAVWL 120
Query: 1187 PWAEFIFNTAYQSSLRDTPFRVVYGRDPPSIRSYEAGDTRVAAVAKSMEERAEFLFDIRY 1246
AEF +NTA+ S+L +PF V+YG PP + D + + ++ER I+
Sbjct: 121 HLAEFWYNTAFHSALNTSPFEVLYGH-PPRYFGIHSEDCAIPELQVWLKERRLMHSLIQQ 179
Query: 1247 RLEQAQAVQKLHYDKHHRHVAYQVGDWALLRLRQRPTTSLPQSGTGKLKPRFYGPYRITE 1306
L +AQ K DK ++++GDW ++L+ +S+ KL R++GP+++ +
Sbjct: 180 HLNRAQQHMKNMADKKRSFRSFELGDWVYIKLQPYVQSSVAARANHKLAFRYFGPFQVIQ 239
Query: 1307 LINDVAVRLELPAGARLHDVFHIGLLKK---FXXXXXXXXXXXXXXXXXXIAPEPERAVR 1363
VA +L+LP + +H VFH+ LK F I R ++
Sbjct: 240 KFGSVAYKLQLPTTSSIHPVFHVSQLKAAKGFQGALHSTLPSSDDAFQYPIMLLDNRLIK 299
Query: 1364 FRLARGVRQALVQWKGESPASATWEDIEVLRAKYP 1398
+ V Q L+QW + ATWED+E LRA++P
Sbjct: 300 -KGNTTVSQVLIQWSDTAVEDATWEDLEDLRARFP 333
>Os08g0273000 RNA-directed DNA polymerase (Reverse transcriptase) domain
containing protein
Length = 211
Score = 240 bits (612), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 111/136 (81%), Positives = 121/136 (88%)
Query: 514 APVAVRPYRYPAAHKDELERQCAAMIEQGVVRRSDSPFSSPVLLVKKADGSWRFCVDYRA 573
APVAVRPYRYPA+HKDELERQCAAM+ QG++R S FSSPVLL+KK GSWR C+DYRA
Sbjct: 56 APVAVRPYRYPASHKDELERQCAAMLTQGLIRCSTLAFSSPVLLIKKDVGSWRCCIDYRA 115
Query: 574 LNALTVKDAFPIPVVDELHGARFFTKLDLRSGYHQVRMRPEDVHKTAFRTHDGLYEFLVM 633
LNA+TVK+A+PIPVVDELHGARFFTKLDL SGYHQVRM DV KTAFRTHDGLYEF+VM
Sbjct: 116 LNAITVKNAYPIPVVDELHGARFFTKLDLCSGYHQVRMNAADVTKTAFRTHDGLYEFMVM 175
Query: 634 PFGLCNAPATFQALMN 649
PFGLCN P TFQALMN
Sbjct: 176 PFGLCNTPTTFQALMN 191
>Os11g0224300 Integrase, catalytic region domain containing protein
Length = 383
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 186/333 (55%), Gaps = 5/333 (1%)
Query: 1063 ALDFIEALPRVRGKSVILTVVDRFSKYCHFIPLAHPYSAESVAQAFFAEIVHLHGVPQSM 1122
++DFIE LP+ G IL VVD+FSK+ FIPL+HP++A VA AF + + G+PQ +
Sbjct: 51 SMDFIEGLPKSEGYDTILVVVDKFSKFAKFIPLSHPFTALQVATAFIKNVYDIFGMPQVI 110
Query: 1123 VSDRDPIFTSTFWRELMRLMGTKLHMTTAFHPQSDGQSEAANRVIIMYLRCLTGDRPRQW 1182
+SDRD IFTS W+EL +L KL+M++++HPQ+DGQ+E N+ + YLRC P+ W
Sbjct: 111 ISDRDKIFTSALWQELFKLADVKLNMSSSYHPQTDGQTERLNQCLEAYLRCAVHSCPKHW 170
Query: 1183 LRWLPWAEFIFNTAYQSSLRDTPFRVVYGRDPPSIRSYEAGDTRVAAVAKSMEERAEFLF 1242
+WL + +NTAY S+L +P+ V++ R P + GD+ V V ++ERA
Sbjct: 171 SKWLSQVQHWYNTAYHSALDKSPYEVLFARKPTPFGLIDVGDSMVPDVHVWLQERAHMNE 230
Query: 1243 DIRYRLEQAQAVQKLHYDKHHRHVAYQVGDWALLRLRQRPTTSLPQSGTGKLKPRFYGPY 1302
+ +L +AQ K DKH + VGD L+L+ S+ + KL R++GPY
Sbjct: 231 VLHQQLTRAQQRMKYQADKHRSKRVFNVGDMVYLKLQPYVQMSVAKRSCQKLCFRYFGPY 290
Query: 1303 RITELINDVAVRLELPAGARLHDVFHIGLLKK-FXXXXXXXXXXXXXXXXXXIAPEPERA 1361
+I E I +VA +L+LP +++H V H+ LLKK A PE
Sbjct: 291 KILERIGEVAYKLDLPPQSQVHPVVHVSLLKKAIRPDVQVQADLPASCMAEDAAIFPEEI 350
Query: 1362 VRFRLAR----GVRQALVQWKGESPASATWEDI 1390
+ +L + V LV+W G A ATWE++
Sbjct: 351 LHRQLIKRGNAAVPYGLVRWTGLPAALATWENL 383
>Os04g0682600 Integrase, catalytic region domain containing protein
Length = 395
Score = 207 bits (528), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 177/317 (55%), Gaps = 13/317 (4%)
Query: 1092 FIPLAHPYSAESVAQAFFAEIVHLHGVPQSMVSDRDPIFTSTFWRELMRLMGTKLHMTTA 1151
F+PL HP++A VAQ F I +HG+PQ++VSDRD +FTS+ W+EL R GT+L M+++
Sbjct: 31 FLPLKHPFTAFGVAQLFMEHIHSIHGLPQAIVSDRDRVFTSSLWKELFRRAGTQLRMSSS 90
Query: 1152 FHPQSDGQSEAANRVIIMYLRCLTGDRPRQWLRWLPWAEFIFNTAYQSSLRDTPFRVVYG 1211
+HPQSDGQ+E N+ + M+LRC P +W WL A++ +NT++ S+L TPF V++G
Sbjct: 91 YHPQSDGQTERVNQCVEMFLRCFVHSCPSRWKHWLALAQYWYNTSFHSALGMTPFEVLFG 150
Query: 1212 RDPPSIRSYEAGDTRVAA---VAKSMEERAEFLFDIRYRLEQAQAVQKLHYDKHHRHVAY 1268
P R + + V A +A + ER + I + L +AQ K D +
Sbjct: 151 HKP---RYFGLSTSSVDAPGDLASWLSERNDMNTLIHHHLLRAQQRMKSQADSKRSERCF 207
Query: 1269 QVGDWALLRLRQRPTTSLPQSGTGKLKPRFYGPYRITELINDVAVRLELPAGARLHDVFH 1328
VGDW ++L+ S+ KL ++YGP+++ + I VA RL+LPA + +H V H
Sbjct: 208 AVGDWVFMKLQPYIQQSVMTRSNRKLSFKYYGPFQVLQRIGLVAYRLQLPAHSLIHPVVH 267
Query: 1329 IGLLKKFXXXXXXXXXXX------XXXXXXXIAPEPERAVRFRLARGVRQALVQWKGESP 1382
+ LKK I R++R R ++ ++Q L++W G S
Sbjct: 268 VSQLKKALAPSEAVQPSLPVLNPDAGHLAIPIKILDHRSIR-RGSKMIKQVLIRWSGVSS 326
Query: 1383 ASATWEDIEVLRAKYPA 1399
++ TWE ++ ++AK+PA
Sbjct: 327 SADTWESLDEMQAKFPA 343
>Os06g0713500 Integrase, catalytic region domain containing protein
Length = 248
Score = 170 bits (431), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 1/223 (0%)
Query: 1111 EIVHLHGVPQSMVSDRDPIFTSTFWRELMRLMGTKLHMTTAFHPQSDGQSEAANRVIIMY 1170
+ LHG+P+ ++SDRD IFTS FW L + G KLHM++++HPQSDGQ+E N+ + ++
Sbjct: 3 NVYRLHGMPKVIISDRDRIFTSQFWECLFTMAGIKLHMSSSYHPQSDGQTERVNQCLEIF 62
Query: 1171 LRCLTGDRPRQWLRWLPWAEFIFNTAYQSSLRDTPFRVVYGRDPPSIRSYEAGDTRVAAV 1230
LRC PR+W WL AEF + ++YQS++ TPF VVYG PS D V +
Sbjct: 63 LRCFIHATPRKWAAWLYLAEFWYYSSYQSTVHKTPFEVVYGYQ-PSHFGISMEDCVVPDL 121
Query: 1231 AKSMEERAEFLFDIRYRLEQAQAVQKLHYDKHHRHVAYQVGDWALLRLRQRPTTSLPQSG 1290
A+ + +R I+ L +AQ K + DK+ +Q+ DW L+++ +S+ +
Sbjct: 122 AEWLSDRKFMHHLIQQHLHRAQQQMKFYADKNRSFREFQLQDWVYLKVQPYVKSSVAKRA 181
Query: 1291 TGKLKPRFYGPYRITELINDVAVRLELPAGARLHDVFHIGLLK 1333
KL R+YGP++I + + VA +L+LP +H V H+ L+
Sbjct: 182 NHKLSFRYYGPFQILQKVGSVAYKLDLPPDCLIHPVVHVSQLR 224
>Os11g0617500 RNA-directed DNA polymerase (Reverse transcriptase) domain
containing protein
Length = 627
Score = 140 bits (354), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 170/409 (41%), Gaps = 13/409 (3%)
Query: 505 HAIVLKPSSAPVAVRPYRYPAAHKDELERQCAAMIEQGVVRRSDSP--FSSPVLLVKKAD 562
H + +KP + P + + A + + + +++ GV++ D P ++PVL V+K++
Sbjct: 52 HHLAVKPDAKPRKQKLRKMSADRQQAAKAEVQKLLKAGVIQEIDHPEWLANPVL-VRKSN 110
Query: 563 GSWRFCVDYRALNALTVKDAFPIPVVDEL----HGARFFTKLDLRSGYHQVRMRPEDVHK 618
G WR CVD+ LN KD F +P +D+L + LD SGYHQ+ M P D+ K
Sbjct: 111 GKWRMCVDFTDLNKACPKDDFLLPRIDQLVDLTASCELMSFLDAYSGYHQIHMNPADIPK 170
Query: 619 TAFRTHDGLYEFLVMPFGLCNAPATFQALMNXXXXXXXXXXXXXXXXXILIYSETWTDHL 678
TAF T G + L MPFGL NA ATF L+ +++ S DH
Sbjct: 171 TAFITPFGTFCHLRMPFGLRNAGATFARLVYKVLYKQLGRNVEAYVDDVVVKSRKAFDHA 230
Query: 679 RHLRTVLSVLRQHRLFVKRSKCTFGSPSVSYLGHVISEAGVAMDPAKVQAIHEWLVPRSA 738
L+ LR + KC FG + LG ++SE G+ +P K+ AI + P S
Sbjct: 231 SDLQETFDNLRAAGTKLNPEKCVFGVRAGKLLGFLVSERGIEANPEKIDAIQQMKPPLSV 290
Query: 739 RAVRSFLGLAGYYRKFVHNYGTIAAP-LTALTKKDGFSWTEDTXXXXXXXXXXVTSAPVL 797
R V+ G +F+ P L + F WT + + S P L
Sbjct: 291 REVQKLAGRIAALNRFLSKAAERGLPFFKTLRGVEKFHWTPECQAAFGELKQYLQSPPAL 350
Query: 798 AMPDFAKPFTVEGDASTHGFGAVLVQD----GHPVAFFSRPVVLRHRALAAYERELIGLV 853
+ AS A LVQ+ PV F S+ + E+ LV
Sbjct: 351 ISLAPGSELLLYLAASPVAVSAALVQEIDSGQKPVYFISKALQGAKTRYIEMEKLAYALV 410
Query: 854 HAVRHWRPYLWGRRFVVKTDHYSLKYLLDQRLATIPQHHWVGKLLGFDF 902
A + Y + +V + Y L +L + T W +L FD
Sbjct: 411 MASCKLKHYFQTHKVIVPS-QYPLGEILWGKEVTGRLSKWAAELSPFDL 458
>Os01g0640066
Length = 334
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Query: 59 KWDFPRYDGTTDPLLFLNKFEAYFRHHRTMAEERVGMASYHLDDVTQTWYTQLLEDEGTP 118
K +FP YDG DPL +LN+ E FR +T +V AS HL Q WY ++ + G P
Sbjct: 126 KLEFPTYDGKGDPLPWLNRCET-FRGQKTPETRKVWYASLHLIGDAQLWYYRIELNSGEP 184
Query: 119 TWGRFKELVNLRFGPPLRSAPLFELSECRRTGTVEEYSNRFQALLPRAGRLDESQRVQLF 178
+W RF +LV+ RFGPP+ +PL EL+ RRTGTVE Y N F AL R L ESQ+VQLF
Sbjct: 185 SWRRFVQLVHTRFGPPMTDSPLGELTALRRTGTVENYVNSFLALACRDVELSESQQVQLF 244
Query: 179 TGGLLPPLSHAVRIHHPETLAAAMSLARQVE 209
T GL+ PL V + P +L A+ LAR E
Sbjct: 245 TAGLVNPLKTDVALCRPRSLDDAIMLARAYE 275
>Os01g0392300
Length = 519
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
Query: 36 TAASTETRHP-DGLRDLDLPPRPKKWDFPRYDGTTDPLLFLNKFEAYFRHHRTMAEERVG 94
+ A T T H D + PR K +FP++D DPL +LN E +F RT A +RV
Sbjct: 313 SGADTATEHSSDSGNNGGGVPRYYKLEFPKFDSKEDPLNWLNHCEQFFHGQRTDAGDRVW 372
Query: 95 MASYHLDDVTQTWYTQLLEDEGTPTWGRFKELVNLRFGPPLRSAPLFELSECRRTGTVEE 154
+A+YHL Q WY + +G P W FK+L +FGPP+R PL EL +T TV
Sbjct: 373 LATYHLTGNAQEWYFHHEQHKGPPDWDTFKDLCYAQFGPPIRHNPLGELKRLTQTTTVAA 432
Query: 155 YSNRFQALLPRAGR-LDESQRVQLFTGGLLPPLSHAVRIHHPETLAAAMSLARQVE 209
Y RF AL R L E+Q+VQL T GL L+ V I+ P+ L AMSLAR E
Sbjct: 433 YQCRFLALASRTAELLTENQQVQLLTAGLREDLAIDVEINRPDDLQEAMSLARAFE 488
>Os03g0377400 Chromo domain containing protein
Length = 257
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 117/251 (46%), Gaps = 5/251 (1%)
Query: 1169 MYLRCLTGDRPRQWLRWLPWAEFIFNTAYQSSLRDTPFRVVYGRDPPSIRSYEAGDTRVA 1228
MYLRC+T P +W +WL AE+ +NT++ ++L +P + ++G DP + +
Sbjct: 1 MYLRCMTQATPTKWNKWLHLAEYWYNTSFHTALGCSPHKALFGADPHVSQVLVLLSSVHQ 60
Query: 1229 AVAKSMEERAEFLFDIRYRLEQAQAVQKLHYDKHHRHVAYQVGDWALLRLRQRPTTSLPQ 1288
+V + ER + ++ +L++AQ K DK ++ VGD L+L+ +S+
Sbjct: 61 SVVDLVSERNQLSAFLQQQLQRAQLRMKHQADKGRSERSFAVGDHVFLKLQPYTQSSVVN 120
Query: 1289 SGTGKLKPRFYGPYRITELINDVAVRLELPAGARLHDVFHIGLLKKFXXXXXXXXXXXXX 1348
KL +F+GP+ I E I A RL+LP + +H VFH+ LK
Sbjct: 121 RPYPKLAFKFFGPFEILEKIGQSAYRLQLPDSSLIHPVFHVSQLKAHVPDHTPVFTSLPH 180
Query: 1349 XXXXXIAPE-PERAVRFRLARGVR----QALVQWKGESPASATWEDIEVLRAKYPAXXXX 1403
A PE + RL + Q L++W ATWED EVL+ ++P+
Sbjct: 181 PVVLDAADVWPEEILDRRLVKKGNATHVQVLIKWSSLPAHQATWEDYEVLKTRFPSAPAW 240
Query: 1404 XXXXXXXGGDV 1414
GG V
Sbjct: 241 GQAVSPAGGTV 251
>Os06g0590100
Length = 260
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 63/105 (60%)
Query: 55 PRPKKWDFPRYDGTTDPLLFLNKFEAYFRHHRTMAEERVGMASYHLDDVTQTWYTQLLED 114
PR K +FP++DG+ DPL +LN E +FR R+ +RV +A+YHL Q WY +
Sbjct: 115 PRFYKLEFPKFDGSDDPLNWLNHCEQFFRAQRSPDGDRVWLATYHLTGAAQEWYFHYEQH 174
Query: 115 EGTPTWGRFKELVNLRFGPPLRSAPLFELSECRRTGTVEEYSNRF 159
+G P W FKEL ++GPP+R+ PL EL ++ TV Y RF
Sbjct: 175 KGPPDWDTFKELCYAQYGPPIRNNPLGELKRLSQSTTVATYQQRF 219
>Os06g0513889
Length = 488
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 126/273 (46%), Gaps = 29/273 (10%)
Query: 791 VTSAPVLAMPDFAKPFTVEGDASTHGFGAVLVQDG----HPVAFFSRPVVLRHRALAAYE 846
+ SAP++ PD++ PF + DAS GAVL Q H +A+ S+ + A E
Sbjct: 182 LISAPIIQPPDWSLPFEIMCDASDFAVGAVLGQTKDRKHHAIAYASKTLTGAQLNYATTE 241
Query: 847 RELIGLVHAVRHWRPYLWGRRFVVKTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFAVEY 906
+EL+ +V A+ +R YL G + +V TDH +LKYLL ++ + W+ L FD ++
Sbjct: 242 KELLAIVFAIDKFRSYLVGAKVIVYTDHAALKYLLPKKDSKRRLIRWILLLQEFDIEIKD 301
Query: 907 KPGAANTVADALSRRDTEEGAILALS-APRFDFISKLHDAQRQDPALTALRDEVSAGTRT 965
K N++AD LSR L ++ R D + K+ D+ D + + + AG
Sbjct: 302 KKRVENSIADHLSRMQITNMHELPINDYLRDDMLLKVIDS---DSWYATIVNFMVAG-HV 357
Query: 966 GPWALVDDL-------LQYNSWLYIPPASPLAR---------EIIEATHE---DGHEGVK 1006
P L L Y +LY + L R +IIE H GH G
Sbjct: 358 PPGENKKRLIYKSRGHLWYAPYLYRVCSDGLLRRCVPVDKGMKIIEKCHAAPYGGHYGAF 417
Query: 1007 RTMHRL-RREFHIPNMKQLVQDWVRSCAVCQRY 1038
RT ++ + F P M +++VR C CQ++
Sbjct: 418 RTHAKIWQSGFFWPTMYDDTKEFVRRCTSCQKH 450
>Os04g0134833
Length = 310
Score = 90.5 bits (223), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 99/185 (53%), Gaps = 15/185 (8%)
Query: 850 IGLVHAVRHWRPYLWGRRFVVKTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFAVEYKPG 909
+ ++ A++ WR Y+ G + ++KTD SLKY++ QRL QH + KL+ +D+ +EYK G
Sbjct: 1 MAILEALKKWRHYVLGSKLIIKTDQQSLKYMMKQRLVEGIQHKLLLKLMEYDYKIEYKAG 60
Query: 910 AANTVADALSR-----RDTEEGAILALSAPRFDFISKLHDAQRQDPALTALRDEVSAGTR 964
N VADALSR D E+ + + P ++I + ++ D + A + GT
Sbjct: 61 KENVVADALSRLPQTEHDNEDCQAITVVIP--EWIQDIQNSYEGD--IQAHKMLSMIGTD 116
Query: 965 TGP---WALVDDLLQYNSWLYIPPASPLAREIIEATHEDG---HEGVKRTMHRLRREFHI 1018
+ P ++L +L+Y +Y+ ++ + +++ H H G++ T R++ F+
Sbjct: 117 SDPNRTYSLESGILRYKGRIYVGDSNSIRTILLQDYHSSAFGRHLGIRATYQRIKGLFYW 176
Query: 1019 PNMKQ 1023
P +K+
Sbjct: 177 PGLKK 181
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 29/196 (14%)
Query: 1209 VYGRDPPSIRSYEAGDTRVAAVAKSMEERAEFLFDIRYRLEQAQAVQKLHYDKHHRHVAY 1268
+Y D SIR+ D +A + + RA + Q ++ L Y
Sbjct: 136 IYVGDSNSIRTILLQDYHSSAFGRHLGIRATY-----------QRIKGLFY--------- 175
Query: 1269 QVGDWALLRLRQRPTTSLPQSGTGKLKPRFYGPYRITELINDVAVRLELPAGARLHDVFH 1328
W L+ + T+ G+ KL+ +FYGP+++ E + VA RL+LP A +H VFH
Sbjct: 176 ----WPGLKKKPYRQTAFGIRGSLKLRSKFYGPFKVIEKVGQVAYRLQLPNDATIHPVFH 231
Query: 1329 IGLLKK-FXXXXXXXXXXXXXXXXXXIAPEPERAVRFRL----ARGVRQALVQWKGESPA 1383
+ LKK I +P ++ R+ V Q L+ W+ P
Sbjct: 232 VSQLKKHLGKRAIPMPNLPSVGPEGQIKTQPTAVLQRRMMPRNGVAVTQWLILWENLGPT 291
Query: 1384 SATWEDIEVLRAKYPA 1399
ATWED +V+R +P
Sbjct: 292 DATWEDADVIRNMFPT 307
>Os11g0457200
Length = 153
Score = 90.5 bits (223), Expect = 9e-18, Method: Composition-based stats.
Identities = 45/108 (41%), Positives = 58/108 (53%)
Query: 55 PRPKKWDFPRYDGTTDPLLFLNKFEAYFRHHRTMAEERVGMASYHLDDVTQTWYTQLLED 114
PR K +FP+YD DPL N E +F +T +RVG+A+YHL D Q WY
Sbjct: 44 PRFYKLEFPKYDDKDDPLNRFNHCEQFFCGQKTHDSDRVGLATYHLADNAQEWYFHYEIH 103
Query: 115 EGTPTWGRFKELVNLRFGPPLRSAPLFELSECRRTGTVEEYSNRFQAL 162
+G PTW FK+L + +FGPP+ L EL +T TV Y F L
Sbjct: 104 KGPPTWDEFKDLCHGQFGPPIHCNSLGELKRLMQTSTVAAYQTMFLTL 151
>Os07g0302600
Length = 707
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 756 HNYGTIAAPLTALTKKDG-FSWTEDTXXXXXXXXXXVTSAPVLAMPDFAKPFTVEGDAST 814
+++ TIA PLT L KD F + + SA ++ PD+ PF + DAS
Sbjct: 391 YDFSTIARPLTNLLAKDAPFEFYGACLKSFEILKKALVSALMIQPPDWTLPFEITCDASD 450
Query: 815 HGFGAVLVQDG----HPVAFFSRPVVLRHRALAAYERELIGLVHAVRHWRPYLWGRRFVV 870
GAVL Q + + S+ + A E+EL+ +V A+ +R YL G + ++
Sbjct: 451 FVVGAVLSQTKDKKHQAICYASKTLTGAQLNYATTEKELLVVVFAINKFRSYLVGAKVII 510
Query: 871 KTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFAVEYKPGAANTVADALSRRDTEEGAILA 930
TD+ +LKYLL ++ A W+ L FD ++ K G N+V D LSR
Sbjct: 511 YTDNAALKYLLTKKDAKPRLLRWILLLQEFDLEIKDKKGVENSVTDHLSRL--------- 561
Query: 931 LSAPRFDFISKLHDAQRQDPALTALRDEVSAGTR-TGPW 968
++ D Q Q P LRD++ R + PW
Sbjct: 562 ----------QITDMQEQ-PINDFLRDDMLMTVRDSNPW 589
>Os06g0513700
Length = 414
Score = 84.0 bits (206), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 791 VTSAPVLAMPDFAKPFTVEGDASTHGFGAVLVQDG----HPVAFFSRPVVLRHRALAAYE 846
+ SAP++ PD++ PF + DAS GAVL Q H +A+ S+ + A E
Sbjct: 160 LISAPIIQPPDWSLPFEIMCDASDFAVGAVLGQTKDRKHHAIAYASKTLTGAQLNYATTE 219
Query: 847 RELIGLVHAVRHWRPYLWGRRFVVKTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFAVEY 906
+EL+ +V A+ +R YL G + +V TDH +LKYLL ++ + W+ L FD ++
Sbjct: 220 KELLAIVFAIDKFRSYLVGAKVIVYTDHAALKYLLTKKDSKRRLIRWILLLQEFDIEIKD 279
Query: 907 KPGAANTVADALSR 920
K N++AD LSR
Sbjct: 280 KKRVENSIADHLSR 293
>Os07g0195900
Length = 527
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 31/260 (11%)
Query: 278 GLCFNCNEKFTRGHNRFCRRLFFVDGVXXXXXXXXXXXXXXXXXXXXPV----------- 326
GLCF C EK++ H C + V+GV +
Sbjct: 226 GLCFKCGEKYSPTH--VCGK---VEGVQLKAMELTDTTEILDDSVLDALTNLDTPPDDGM 280
Query: 327 -FSLHAVAGVPIADTIQLQVTVXXXXXXXXXXXXXTHSFIGEEAARRAGLPIQSSPRMTA 385
S+ A+AG A+++QL+ V +HSFI + R LP+ S T
Sbjct: 281 LLSVQALAGTSSANSLQLRALVGNQVVLILVDSGSSHSFINADLCHRLQLPLVSCDPATV 340
Query: 386 IVANGERVACPGVIRDAAFTINGSTFHTDLFVMPLAGFDVVLGTRWLGTLGPIVWDFTSR 445
+A+G + C + + I G TF + + V+ L G+D VLG WL P+ ++ +
Sbjct: 341 KIADGTLLTCSAQVPAFTWWIQGYTFVSSMKVLDLGGYDAVLGMDWLSQYSPMQCNWAEK 400
Query: 446 SMAFQRDGQRFAWKGVASTSTTHLRTLAAASGT----LLDEL--LVAYEDVFGEPTGLPP 499
++F Q +G+ S S L+ L A + + EL +VA ++V PT +
Sbjct: 401 CLSFAYQAQTVKLQGIVSHS---LQQLTAVTSDKPFPVFSELPDIVALDEVELLPTAI-- 455
Query: 500 PRGRDHAIVLKPSSAPVAVR 519
D +V K ++A V V+
Sbjct: 456 ---LDRQMVKKGNAAVVQVK 472
>Os06g0513835
Length = 715
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 184/459 (40%), Gaps = 68/459 (14%)
Query: 893 WVGKLLGFDFAVEYKPGAANTVADALSRRDTEEGAILALSAP-RFDFISKLHDAQRQDPA 951
W+ L FD ++ K N++AD LSR L ++ R D + K+ D+ D
Sbjct: 244 WILLLQEFDIEIKDKKRVENSIADHLSRMQITNMHELPINDYLRDDMLLKVIDS---DSW 300
Query: 952 LTALRDEVSAGTRTGPWALVDDLLQYNS--------WLYIPPASPLAR---------EII 994
+ + + AG P L Y S +LY + L R +II
Sbjct: 301 YATIVNFMVAGHL--PPGENKKRLIYKSRGHLWDAPYLYRVCSDSLLRRCVPVDKGMKII 358
Query: 995 EATHE---DGHEGVKRTMHRL-RREFHIPNMKQLVQDWVRSCAVCQRYKSEHXXXXXXXX 1050
+ H GH G RT ++ + F P M +++VR C CQ++
Sbjct: 359 KKCHAAPYGGHYGAFRTHAKIWQSGFFWPTMYDDTKEFVRRCTSCQKHGGITACDAMPLT 418
Query: 1051 XXXXXQ--GVWTDIALDFIEALPRVRGKSVILTVVDRFSKYCHFIPLAHPYSAESVAQAF 1108
+ VW ++F+ P+ +L VD SK+ +P
Sbjct: 419 YNLQVELFDVW---GINFMGPFPKSYDCEYVLVAVDYVSKWVEAMPCR------------ 463
Query: 1109 FAEIVHLHGVPQSMVSDRDPIFTSTFWRELMRLMGTKLHMTTAFHPQSDGQSEAANRVII 1168
A+ H + S D+ TF R ++ +G + ++ T +HPQ+ GQ+E +N+ I
Sbjct: 464 AADAKHARRMLGSHFIDK------TF-RNFLQELGAQHNIATPYHPQTSGQAETSNKQIK 516
Query: 1169 MYLRCLTGDRPRQWLRWLPWAEFIFNTAYQSSLRDTPFRVVYG-----------RDPPSI 1217
L+ + + W LP A + + TAY++ + +P+++VYG R +I
Sbjct: 517 NILQKTVNEMGKAWKNKLPDALWAYRTAYKTPIGMSPYQLVYGKTCHFSVELEHRAHWAI 576
Query: 1218 RSYEAGDTRVAAVAKSMEERAEFLFDIRYRLEQA-QAVQKLHYDKHHRHVAYQVGDWALL 1276
R++ T K E D Y + + K +DK +H ++ GD LL
Sbjct: 577 RTWNMDLTGAGQHRKMQHSELEEWRDKAYHNAKIYKDRTKRWHDKRIKHKEFKAGDKVLL 636
Query: 1277 RLRQRPTTSLPQSGTGKLKPRFYGPYRITELINDVAVRL 1315
+ + G GKL+ ++ GPY + + + AV L
Sbjct: 637 F-----NSRVKLFGHGKLRSKWMGPYTVVDASSQGAVTL 670
>Os04g0283700 Chromo domain containing protein
Length = 258
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 6/160 (3%)
Query: 1244 IRYRLEQAQAVQKLHYDKHHRHVAYQVGDWALLRLRQRPTTSLPQSGTGKLKPRFYGPYR 1303
++ L +AQ K DK + +GDW L+L+ TS+ KL +++GP++
Sbjct: 5 VQQHLHRAQQQMKHFADKKRSFRTFAIGDWVYLKLQPYVQTSVAVRANHKLAFKYFGPFQ 64
Query: 1304 ITELINDVAVRLELPAGARLHDVFHIGLLKKFXXXXXXXXXXXXXXXXXXIAPEPERAVR 1363
IT I VA +L+LP + +H VFH+ LK P R +
Sbjct: 65 ITAQIGTVAYKLQLPPTSSIHPVFHVSQLKSATGFTGHVQSHLPSSISALQV--PWRILD 122
Query: 1364 FRLARG----VRQALVQWKGESPASATWEDIEVLRAKYPA 1399
RLA+ + Q LVQW P ATWED E L A++PA
Sbjct: 123 RRLAKKGNSTISQVLVQWSESPPEDATWEDYEELHARFPA 162
>Os06g0471300
Length = 269
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 801 DFAKPFTVEGDASTHGFGAVLVQDG----HPVAFFSRPVVLRHRALAAYERELIGLVHAV 856
D++ PF + DAS GAVL Q H +A+ S+ + A E+EL+ +V A+
Sbjct: 84 DWSLPFEIMYDASDFAVGAVLGQTKDRKHHAIAYASKTLTGAQLNYATTEKELLAIVFAI 143
Query: 857 RHWRPYLWGRRFVVKTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFAVEYKPGAANTVAD 916
+R YL G + +V TDH +LKYLL ++ A W+ L FD ++ K G N+VAD
Sbjct: 144 DKFRSYLVGAKVIVYTDHAALKYLLTKKDAKSWLIRWILLLQEFDIEIKDKKGVENSVAD 203
Query: 917 ALSR 920
LSR
Sbjct: 204 HLSR 207
>Os06g0638300
Length = 695
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 1231 AKSMEERAEFLFD-IRYRLEQAQAVQKLHYDKHHRHVAYQVGDWALLRLRQRPTTSLPQS 1289
A++ E+ +F+ ++ LE+AQA K D+ +VGD A L+++ SL
Sbjct: 518 ARNREQAKAAIFEAVKSNLEKAQARMKYFADRRRSERTLEVGDMAYLKMQPYRHNSLGLH 577
Query: 1290 GTGKLKPRFYGPYRITELINDVAVRLELPAGARLHDVFHIGLLKK-FXXXXXXXXXXXXX 1348
G+ KL ++YGP+R+TE + VA RL L G+ +H VFH+ LKK
Sbjct: 578 GSLKLHSKYYGPFRVTEKVGAVAYRLLLQEGSLIHPVFHVSQLKKHLGPKAVPETALPLI 637
Query: 1349 XXXXXIAPEPERAVRFRLARGVRQALVQWK---GESPA-SATWEDIEVLRAKYPA 1399
+ EP + R+ + +VQWK PA +ATWED + +PA
Sbjct: 638 DAEGNVLTEPVAVLERRMIPRNNEPVVQWKVHWANLPAEAATWEDASFIAKVFPA 692
>Os02g0522000 Retrotransposon gag protein family protein
Length = 380
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Query: 55 PRPKKWDFPRYDGTTDPLLFLNKFEAYFRHHRTMAEERVGMASYHLDDVTQTWYTQLLED 114
PR K +FPR+DG +P L+ E YF ++ + A+ H W
Sbjct: 152 PRLPKTNFPRFDGD-NPKLWKKNSEKYFDMYQVPYDSWANFATLHFVGNAALWLQTYEAL 210
Query: 115 EGTPTWGRFKELVNLRFGPPLRSAPLFELSECRRTGTVEEYSNRFQALLPRA----GRLD 170
TW +V+ +FG L EL R+T V+ Y ++F+ L+ R D
Sbjct: 211 HSVETWPELCVVVHNKFGKDKYQEHLEELESLRQTSGVDAYYSKFEELMHRVLVYNQAFD 270
Query: 171 ESQRVQLFTGGLLPPLSHAVRIHHPETLAAAMSLARQVE 209
E+ V F GGL + A+++H P T+ AA+SLA+ E
Sbjct: 271 ETYFVTKFVGGLKTEIKAAIKLHKPRTVDAALSLAKTQE 309
>Os09g0250500 Integrase, catalytic region domain containing protein
Length = 87
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 1148 MTTAFHPQSDGQSEAANRVIIMYLRCLTGDRPRQWLRWLPWAEFIFNTAYQSSLRDTPFR 1207
M++++HPQ+DGQ+E N+ + YLRC P +W WL A++ +NT++ S+L TP+
Sbjct: 1 MSSSYHPQTDGQTERLNQCLEAYLRCTVHACPTKWSSWLSQAQYWYNTSFHSALGKTPYE 60
Query: 1208 VVYGRDPPSIRSYEAGDTRVAAV 1230
V++ R P + G + V V
Sbjct: 61 VLFARKPSHFGVADLGQSTVPDV 83
>Os11g0524800
Length = 239
Score = 68.6 bits (166), Expect = 4e-11, Method: Composition-based stats.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 25/210 (11%)
Query: 1122 MVSDRDPIFTSTFWRELMRLMGTKLHMTTAFHPQSDGQSEAANRVIIMYLRCLTGDRPRQ 1181
++SD F +R+L+R MG K +M T +HPQ+ GQ+E +N+ I L+
Sbjct: 2 VISDGGSHFIDKTFRDLLREMGAKHNMATPYHPQTSGQAETSNKQIKNILQKTVNKMGTG 61
Query: 1182 WLRWLPWAEFIFNTAYQSSLRDTPFRVVYG-----------RDPPSIRSYE-----AGDT 1225
W LP+A + + TAY++ + +P+++VYG R +IR++ AG+
Sbjct: 62 WKDRLPYALWAYRTAYKTPIGMSPYQIVYGKSCRLPVELEHRAYWAIRNWNMDFEGAGEW 121
Query: 1226 RVAAVAKSMEERAEFLFDIRYRLEQAQAVQKLHYDKHHRHVAYQVGDWALLRLRQRPTTS 1285
R +A+ E + + ++ + E+ K ++K + ++ GD L+ +
Sbjct: 122 RKMQIAELEEWKEKAYYNAKIYKERT----KRWHEKRIKIKKFKPGDKVLIF-----NSR 172
Query: 1286 LPQSGTGKLKPRFYGPYRITELINDVAVRL 1315
+ G KL+ ++ GP+ + + + A+ L
Sbjct: 173 VKLFGHEKLRSKWEGPFDVIDTSSHGAITL 202
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.136 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 46,200,363
Number of extensions: 1873235
Number of successful extensions: 4598
Number of sequences better than 1.0e-10: 34
Number of HSP's gapped: 4555
Number of HSP's successfully gapped: 37
Length of query: 1463
Length of database: 17,035,801
Length adjustment: 113
Effective length of query: 1350
Effective length of database: 11,135,619
Effective search space: 15033085650
Effective search space used: 15033085650
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 163 (67.4 bits)