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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0524800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.56 (0.0724) R2 : 0.104
β1 : 2.45 (0.371) R2dD : 0.487 R2D : -0.573
β2 : -- (--) R2dC : -- R2C : --
β3 : -34.4 (5.21) R2dE : 12.5 R2E : -13.2
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 210 (31.1) R2dD*E : 13.3 R2D*E : -12.5
γ1 : -0.118 (0.0923) R2dN8 : 0.0044 R2N8 : -0.202
σ : 0.808
deviance : 301
__
_____
C
peak time of C : --
E
wheather : atmosphere
threshold : 1000
memory length : 64
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 14
open length of G : 9.43

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
286.8 0.796 2.57 2.43 0.0714 -34 2.39 205 -0.128 17.5 1000 71 14.5 8.89
316.56 0.835 2.96 0.211 0.101 0.0163 2.53 -- -0.137 17.6 1000 71 14.5 8.89
299.01 0.805 2.58 2.39 0.196 -34.3 -- 208 -0.142 21.4 1000 65 14 9.38
329.51 0.851 2.95 0.186 0.116 0.355 -- -- -0.101 22.5 1009 143 14.8 9.54
301 0.808 2.56 2.45 -- -34.4 -- 210 -0.118 -- 1000 64 14 9.43
316.56 0.834 2.96 0.212 0.102 -- 2.53 -- -0.137 17.6 -- -- -- --
330.6 0.851 2.96 0.196 0.206 -- -- -- -0.128 21.2 -- -- -- --
326.63 0.842 2.94 0.194 -- 0.447 -- -- -0.103 -- 1017 26 15.2 12.3
326.02 0.846 2.94 -- 0.309 0.774 -- -- -0.111 8.8 1018 2 16 11.9
333.06 0.853 2.95 0.197 -- -- -- -- -0.129 -- -- -- -- --
331.61 0.852 2.96 -- 0.206 -- -- -- -0.15 21.3 -- -- -- --
327.49 0.846 2.95 -- -- 0.436 -- -- -0.127 -- 1018 2 16 11.9
334.08 0.853 2.96 -- -- -- -- -- -0.151 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 288.16 atmosphere 1000 90 < th dose dependent rect. 14 9
3 289.23 atmosphere 1000 30 < th dose dependent rect. 15 5
13 289.61 atmosphere 1000 30 < th dose dependent rect. 15 3
22 289.99 atmosphere 1000 10 < th dose independent rect. 15 6
33 290.17 atmosphere 1000 10 < th dose independent rect. 15 3
44 290.33 atmosphere 1000 10 < th dose dependent rect. 15 1
72 290.71 atmosphere 1000 10 < th dose independent rect. 15 1
123 293.43 temperature 30 10 < th dose dependent rect. 15 1
202 295.67 temperature 25 90 < th dose independent rect. 15 1
233 296.49 wind 1 90 < th dose independent rect. 14 1
244 297.03 radiation 20 90 < th dose independent rect. 15 1
279 299.49 atmosphere 1000 90 < th dose dependent sin 16 NA
289 299.89 atmosphere 1005 30 > th dose dependent rect. 15 1
301 300.69 wind 1 30 < th dose dependent rect. 6 9
309 300.89 atmosphere 1000 30 > th dose independent sin 17 NA
312 300.93 wind 1 30 < th dose dependent rect. 7 20
322 301.18 wind 1 30 < th dose independent rect. 6 21
331 301.47 wind 1 30 > th dose independent rect. 16 23
337 301.52 humidity 60 90 > th dose independent rect. 15 1
366 302.25 wind 1 30 < th dose dependent sin 23 NA
368 302.29 atmosphere 1000 30 < th dose independent sin 16 NA
438 303.31 wind 3 90 < th dose dependent rect. 12 8
459 303.55 wind 1 30 < th dose independent rect. 13 14
460 303.56 wind 1 90 < th dose dependent rect. 14 1
463 303.59 radiation 40 90 > th dose independent rect. 14 1
478 303.83 wind 1 90 > th dose independent rect. 9 14
505 304.15 radiation 40 14400 < th dose independent rect. 16 2
515 304.23 wind 3 10 < th dose independent rect. 14 2
534 304.34 wind 1 30 < th dose dependent sin 18 NA
556 304.50 wind 1 30 < th dose independent rect. 6 9
563 304.53 wind 1 30 < th dose dependent rect. 7 17
593 304.60 wind 3 270 < th dose independent rect. 12 18
596 304.63 wind 7 90 < th dose dependent rect. 12 21
607 304.67 wind 1 10 < th dose dependent rect. 14 2
616 304.72 atmosphere 995 30 > th dose independent rect. 15 1
627 304.76 wind 1 90 > th dose independent rect. 3 11
636 304.83 wind 3 90 < th dose independent rect. 13 7
657 304.98 radiation 40 90 < th dose dependent rect. 15 1
703 305.21 wind 1 10 < th dose independent rect. 12 3
717 305.25 wind 1 30 > th dose independent rect. 19 20
767 305.48 radiation 40 90 > th dose dependent rect. 14 1
770 305.50 radiation 20 30 < th dose independent rect. 23 17
801 305.59 humidity 70 10 < th dose independent rect. 15 3
803 305.61 wind 1 30 < th dose dependent rect. 13 14
829 305.72 wind 7 720 < th dose independent rect. 16 4
837 305.74 wind 5 90 < th dose dependent rect. 13 4
852 305.78 wind 3 720 < th dose dependent rect. 19 1
881 305.87 wind 1 10 > th dose independent rect. 9 13
886 305.89 wind 7 720 < th dose independent rect. 16 12
906 305.94 wind 1 30 < th dose independent sin 17 NA
908 305.94 wind 3 270 < th dose dependent rect. 12 15
975 306.13 wind 1 30 > th dose independent sin 23 NA