Os08g0451600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase aspartic, catalytic domain containing protein.
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Os08g0451600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase aspartic, catalytic domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.71 | 0.265 | 9.04 | 1.67 | 0.307 | -0.522 | -0.248 | 0.603 | 0.486 | 22.7 | 22.2 | 1246 | -- | -- |
| 33.06 | 0.268 | 9.05 | 1.56 | 0.299 | -0.567 | -0.159 | -- | 0.449 | 22.3 | 21.64 | 2225 | -- | -- |
| 31.95 | 0.263 | 9.04 | 1.67 | 0.305 | -0.512 | -- | 0.593 | 0.486 | 22.5 | 22.3 | 1257 | -- | -- |
| 32.69 | 0.266 | 9.05 | 1.48 | 0.309 | -0.533 | -- | -- | 0.452 | 22.6 | 22.28 | 1211 | -- | -- |
| 36.67 | 0.282 | 9.03 | 1.7 | -- | -0.517 | -- | 0.629 | 0.489 | -- | 22.22 | 1530 | -- | -- |
| 43.25 | 0.308 | 9.09 | 1.29 | 0.27 | -- | -0.147 | -- | 0.261 | 22.1 | -- | -- | -- | -- |
| 43.33 | 0.308 | 9.09 | 1.3 | 0.271 | -- | -- | -- | 0.262 | 22 | -- | -- | -- | -- |
| 37.58 | 0.285 | 9.05 | 1.5 | -- | -0.53 | -- | -- | 0.438 | -- | 22.1 | 1517 | -- | -- |
| 85.43 | 0.43 | 9.11 | -- | 0.327 | -0.194 | -- | -- | 0.206 | 22.3 | 22.57 | 902 | -- | -- |
| 47.76 | 0.323 | 9.09 | 1.3 | -- | -- | -- | -- | 0.262 | -- | -- | -- | -- | -- |
| 87.62 | 0.438 | 9.13 | -- | 0.277 | -- | -- | -- | 0.117 | 22.4 | -- | -- | -- | -- |
| 66.42 | 0.38 | 9.18 | -- | -- | 0.757 | -- | -- | -0.13 | -- | 21.08 | 47520 | -- | -- |
| 92.32 | 0.448 | 9.12 | -- | -- | -- | -- | -- | 0.118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.55 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 2 | 31.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 5 | 31.83 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 6 | 31.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 9 | 31.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 11 | 31.94 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 19 | 32.05 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 23 | 32.08 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 27 | 32.09 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 43 | 32.32 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 46 | 32.38 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 52 | 32.43 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 61 | 32.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 62 | 32.55 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 63 | 32.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 67 | 32.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 68 | 32.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 69 | 32.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 84 | 32.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 94 | 32.64 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 96 | 32.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 97 | 32.64 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 107 | 32.66 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 115 | 32.67 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 116 | 32.67 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 5 |
| 127 | 32.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 145 | 32.71 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 164 | 32.73 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 203 | 32.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 255 | 32.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 19 |
| 267 | 32.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 273 | 32.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 305 | 32.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 307 | 32.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 327 | 32.84 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 420 | 32.91 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 540 | 32.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 573 | 33.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 750 | 33.12 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 958 | 33.25 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 13 |