BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0433200 Os03g0433200|Os03g0433200
(603 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0433200 GRAS transcription factor domain containing pr... 736 0.0
Os07g0586900 GRAS transcription factor domain containing pr... 587 e-168
Os07g0583600 Chitin-inducible gibberellin-responsive protein 142 8e-34
Os01g0881500 Similar to Scarecrow-like 1 (Fragment) 135 1e-31
Os05g0500600 GRAS transcription factor domain containing pr... 130 3e-30
Os07g0545800 Similar to Chitin-inducible gibberellin-respon... 121 2e-27
Os03g0193000 GRAS transcription factor domain containing pr... 120 3e-27
Os07g0589200 GRAS transcription factor domain containing pr... 119 5e-27
Os03g0690600 Similar to SCARECROW-like protein 107 3e-23
Os12g0573200 GRAS transcription factor domain containing pr... 106 6e-23
Os01g0902900 105 8e-23
Os11g0507300 104 2e-22
Os05g0110400 GRAS transcription factor domain containing pr... 94 3e-19
Os03g0707600 OsGAI 94 4e-19
Os11g0124300 Similar to SCARECROW 94 4e-19
Os12g0136400 91 3e-18
Os12g0122000 SCARECROW 87 3e-17
Os03g0263300 85 1e-16
Os03g0723000 GRAS transcription factor domain containing pr... 73 6e-13
Os02g0681900 GRAS transcription factor domain containing pr... 71 3e-12
Os10g0369600 Similar to SCARECROW gene regulator-like (Phyt... 69 1e-11
>Os03g0433200 GRAS transcription factor domain containing protein
Length = 603
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/603 (65%), Positives = 396/603 (65%)
Query: 1 MDTLFRLVSLXXXXXXXXAASPSPPDQPHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
MDTLFRLVSL AASPSPPDQPHK
Sbjct: 1 MDTLFRLVSLHHHHHHQHAASPSPPDQPHKSYPSSRGSTSSPSSHHTHNHTYYHHSHSHY 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGNGHQFYMDEDFXXXXXXRQFHXXX 120
CGNGHQFYMDEDF RQFH
Sbjct: 61 NNNSNTNYYYQGGGGGGGGYYYAEEQQPAAYLEECGNGHQFYMDEDFSSSSSSRQFHSGT 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXHGLFEAADFSFPQVDISLDFXXXXXXXXXXXXXXXXXXX 180
HGLFEAADFSFPQVDISLDF
Sbjct: 121 GAPSSAPVPPPPSATTSSAGGHGLFEAADFSFPQVDISLDFGGSPAVPSSSGAGAGAGAA 180
Query: 181 XXXXXRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARL 240
RWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARL
Sbjct: 181 PSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARL 240
Query: 241 TTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEXXXXX 300
TTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLE
Sbjct: 241 TTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAG 300
Query: 301 XXXXXXXXXXXXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXX 360
TPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSI
Sbjct: 301 AAASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAP 360
Query: 361 XXXXQRVMREIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNC 420
QRVMREIGQRLEKFARLMGVPFSFRAVHHSG REGGATAALAVNC
Sbjct: 361 SAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHSGDLADLDLAALDLREGGATAALAVNC 420
Query: 421 VNALRGVARGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEGL 480
VNALRGVARGRDAFVASLRRLEPRVVTVV FVKVFGEGL
Sbjct: 421 VNALRGVARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGEGL 480
Query: 481 RFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMRSA 540
RFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMRSA
Sbjct: 481 RFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMRSA 540
Query: 541 GFSPAAFSEDVADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXXXXXFLAWKEQPVVWASA 600
GFSPAAFSEDVADDVRSLLRRYKEGWSMR FLAWKEQPVVWASA
Sbjct: 541 GFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAAAAGAFLAWKEQPVVWASA 600
Query: 601 WKP 603
WKP
Sbjct: 601 WKP 603
>Os07g0586900 GRAS transcription factor domain containing protein
Length = 602
Score = 587 bits (1513), Expect = e-168, Method: Compositional matrix adjust.
Identities = 330/532 (62%), Positives = 350/532 (65%), Gaps = 40/532 (7%)
Query: 95 CGNG--HQFYMDEDFXXXXXXRQFHXXXXXXXXXXXXXX-----------XXXXXXXXXX 141
CGN HQ YMDEDF R FH
Sbjct: 88 CGNAPHHQLYMDEDFSSSSSSRHFHHGARVQQQQPPASSTPTGTAPTPPLSTSSTAAGAG 147
Query: 142 HGLFEAADFSFPQVDISLDFXXXXXXXXXXXXXXXXXXXXXXXXRWAAQLLMECARAVAG 201
HGLFEAAD SFP D++LDF RWA+QLL+ECAR+VA
Sbjct: 148 HGLFEAADLSFPP-DLNLDFSSPASSSGGGTASSGAVGGGGGG-RWASQLLLECARSVAA 205
Query: 202 RDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLATASDRNASF 261
RDSQRVQQLMWMLNELASPYGDV+QKLASYFLQGLFARLT SGPRTLRTLA ASDRN SF
Sbjct: 206 RDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTLRTLAAASDRNTSF 265
Query: 262 DSTRRTALKFQELSPWTPFGHVAANGAILESFLEXXXXXXXXXXXXXXXXXTPPTRLHIL 321
DSTRRTAL+FQELSPW+ FGHVAANGAILESFLE + R HIL
Sbjct: 266 DSTRRTALRFQELSPWSSFGHVAANGAILESFLE-----------VAAAASSETQRFHIL 314
Query: 322 DLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXX--XXXXXXXXXQRVMREIGQRLEKFA 379
DLSNTFCTQWPTLLEALATRS+D+TPHLSI QRVMREIGQR+EKFA
Sbjct: 315 DLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFA 374
Query: 380 RLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCVNALRGVARG----RDAFV 435
RLMGVPF FRAVHHSG REGGAT ALAVNCVN+LRGV G RDAF
Sbjct: 375 RLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSLRGVVPGRARRRDAFA 434
Query: 436 ASLRRLEPRVVTVVXXXXXXXXX----XXXXXXXXXXXXXFVKVFGEGLRFFSAYMDSLE 491
ASLRRL+PRVVTVV F+KVFGEGLRFFSAYMDSLE
Sbjct: 435 ASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLE 494
Query: 492 ESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDV 551
ESFPKTSNERL+LER GRAIVDLVSCPAS+S ERRETAASWARRMRSAGFSP AFSEDV
Sbjct: 495 ESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDV 554
Query: 552 ADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXXXXXFLAWKEQPVVWASAWKP 603
ADDVRSLLRRY+EGWSMR FLAWKEQP+VWASAW+P
Sbjct: 555 ADDVRSLLRRYREGWSMR----EAGTDDSAAGAGVFLAWKEQPLVWASAWRP 602
>Os07g0583600 Chitin-inducible gibberellin-responsive protein
Length = 544
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 60/420 (14%)
Query: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLR 249
+LL+ CARAV ++S + ++ L ++ S G+ ++L +Y ++GL ARL +SG +
Sbjct: 176 ELLIACARAVEEKNSFAIDMMIPELRKIVSVSGEPLERLGAYMVEGLVARLASSGISIYK 235
Query: 250 TLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEXXXXXXXXXXXXXX 309
L +++ S E P+ FG+++ANGAI E+
Sbjct: 236 ALKCKEPKSSDLLSYMHF---LYEACPYFKFGYMSANGAIAEAVKGE------------- 279
Query: 310 XXXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQRVMR 369
R+HI+D + QW +LL+ALA R P + I +
Sbjct: 280 ------DRIHIIDFHISQGAQWISLLQALAARPGG-PPTVRITGIDDSVSAYARGGG-LE 331
Query: 370 EIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCVNALRGV-- 427
+G+RL A L VPF F + SG E ALAVN L +
Sbjct: 332 LVGRRLSHIASLCKVPFEFHPLAISGSKVEAAHLGVIPGE-----ALAVNFTLELHHIPD 386
Query: 428 -----ARGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEGLRF 482
A RD + ++ L P+V+T+V F + F E L +
Sbjct: 387 ESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAP------------FPQRFAETLDY 434
Query: 483 FSAYMDSLEESFPKTSNERLSLER-AVGRAIVDLVSCPASQSAERRETAASWARRMRSAG 541
++A +S++ + P+ ER+++E+ + R IV+L++C + AER E W R+ AG
Sbjct: 435 YTAIFESIDLTLPRDDRERINMEQHCLAREIVNLIACEGEERAERYEPFGKWKARLTMAG 494
Query: 542 FSPAAFSEDVADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXXXXXFLAWKEQPVVWASAW 601
F P+ S V +R+LL+ Y + + + +L WK +P+V +SAW
Sbjct: 495 FRPSPLSSLVNATIRTLLQSYSDNYKL-----------AERDGALYLGWKSRPLVVSSAW 543
>Os01g0881500 Similar to Scarecrow-like 1 (Fragment)
Length = 553
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 181/428 (42%), Gaps = 66/428 (15%)
Query: 186 RWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGP 245
R QLL +CA A++ + Q ++ L ++ S GD Q++A+Y ++GL AR+ SG
Sbjct: 181 RTPKQLLFDCAMALSDYNVDEAQAIITDLRQMVSIQGDPSQRIAAYLVEGLAARIVASGK 240
Query: 246 RTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEXXXXXXXXXX 305
+ L+ S + E+ P FG +AAN AILE+
Sbjct: 241 GIYKALSCKEPPTLYQLSAMQILF---EICPCFRFGFMAANYAILEA------------- 284
Query: 306 XXXXXXXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQ 365
R+HI+D +Q+ TL++ L +++ HL I Q
Sbjct: 285 ------CKGEDRVHIIDFDINQGSQYITLIQFLKN-NANKPRHLRITGVDDPETV----Q 333
Query: 366 RV---MREIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCVN 422
R ++ IGQRLEK A G+ F FRAV + E AL VN
Sbjct: 334 RTVGGLKVIGQRLEKLAEDCGISFEFRAVGANIGDVTPAMLDCCPGE-----ALVVNFAF 388
Query: 423 ALR-------GVARGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKV 475
L + RD + ++ L+P++VT+V F
Sbjct: 389 QLHHLPDESVSIMNERDQLLRMVKGLQPKLVTLVEQDANTNTAP------------FQTR 436
Query: 476 FGEGLRFFSAYMDSLEESFPKTSNERLSLER-AVGRAIVDLVSCPASQSAERRETAASWA 534
F E +++A DSL+ + P+ S +R+++ER + R IV++++C ER E A W
Sbjct: 437 FREVYDYYAALFDSLDATLPRESPDRMNVERQCLAREIVNILACEGPDRVERYEVAGKWR 496
Query: 535 RRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXXXXXFLAWKEQP 594
RM AGF+P FS +V +RSLL+ Y + + W E+
Sbjct: 497 ARMTMAGFTPCPFSSNVISGIRSLLKSYCDRYKFE-----------EDHGGLHFGWGEKT 545
Query: 595 VVWASAWK 602
++ +SAW+
Sbjct: 546 LIVSSAWQ 553
>Os05g0500600 GRAS transcription factor domain containing protein
Length = 425
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 168/432 (38%), Gaps = 63/432 (14%)
Query: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLR 249
QLL+ CA A+ D QQ MW+LN +AS GD Q+L S+ L+ L AR
Sbjct: 38 QLLLHCAAALESNDVTLAQQAMWVLNNIASSQGDPSQRLTSWLLRALVARACRLCAAAPA 97
Query: 250 TLATA-SDRNASFDSTRRTAL----KFQELSPWTPFGHVAANGAILESFLEXXXXXXXXX 304
A +R + R ++ + +L+PW FG A+N AIL +
Sbjct: 98 GAAVEFLERGRAPPWGRAMSVTELADYVDLTPWHRFGFTASNAAILRAV----------- 146
Query: 305 XXXXXXXXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXX 364
+ +H++DLS T C QWPTL++ L+ R P + I
Sbjct: 147 --------AGASAVHVVDLSVTHCMQWPTLIDVLSKRPG-GAPAIRITVPSVRPAVPPLL 197
Query: 365 QRVMREIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGAT----------- 413
E+G RL FA+ GV F V + +E +
Sbjct: 198 AVSSSELGARLAIFAKSKGVQLEFNVVESATTTSPKKTSTTLCQELASVLSDPPSLGLRD 257
Query: 414 -AALAVNCVNALRGVA-RGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXX 471
A+ VNC + LR VA RD F+ ++R L P ++TV
Sbjct: 258 GEAVVVNCQSWLRHVAPDTRDLFLDTVRALNPCLLTVT------------DEDADLGSPS 305
Query: 472 FVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAA 531
F +D+L+ S PK S RL E AVGR I ++ AER E A
Sbjct: 306 LASRMAGCFDFHWILLDALDMSAPKDSPRRLEQEAAVGRKIESVIG--EEDGAERSEPGA 363
Query: 532 SWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXXXXXFLAWK 591
A RM GF+ F E+ A +VR LL + GW ++ L WK
Sbjct: 364 RLAERMSRKGFAGVVFDEEAAAEVRRLLSEHATGWGVK-----------REDDMLVLTWK 412
Query: 592 EQPVVWASAWKP 603
V+ AW P
Sbjct: 413 GHAAVFTGAWTP 424
>Os07g0545800 Similar to Chitin-inducible gibberellin-responsive protein
Length = 571
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 168/420 (40%), Gaps = 60/420 (14%)
Query: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLR 249
QLL CA A++ ++ +L+ + S G+ Q+L +Y L+GL AR SG R
Sbjct: 203 QLLTRCAEALSEDRTEEFHKLVQEARGVVSINGEPIQRLGAYLLEGLVARHGNSGTNIYR 262
Query: 250 TLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEXXXXXXXXXXXXXX 309
L + S R + P+ FG++AANGAI E+
Sbjct: 263 ALKCREPESKELLSYMRI---LYNICPYFKFGYMAANGAIAEALRTE------------- 306
Query: 310 XXXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQRVMR 369
+HI+D TQW TL++ALA R P + I + +
Sbjct: 307 ------NNIHIIDFQIAQGTQWITLIQALAARPGG-PPRVRITGIDDPVSEYARGEG-LD 358
Query: 370 EIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCVNALR---- 425
+G+ L+ + +P F + S R G AL+VN L
Sbjct: 359 IVGKMLKSMSEEFKIPLEFTPL--SVYATQVTKEMLEIRPG---EALSVNFTLQLHHTPD 413
Query: 426 ---GVARGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEGLRF 482
V RD + ++ L P+V T+V F+ FGE + +
Sbjct: 414 ESVDVNNPRDGLLRMVKGLSPKVTTLVEQESHTNTTP------------FLMRFGETMEY 461
Query: 483 FSAYMDSLEESFPKTSNERLSLER-AVGRAIVDLVSCPASQSAERRETAASWARRMRSAG 541
+SA +S++ + P+ + ER+S+E+ + + IV++++C ER E W R+ AG
Sbjct: 462 YSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSRLTMAG 521
Query: 542 FSPAAFSEDVADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXXXXXFLAWKEQPVVWASAW 601
F P S V +R LL Y + +++ L W+ + ++ ASAW
Sbjct: 522 FRPYPLSSYVNSVIRKLLACYSDKYTL-----------DEKDGAMLLGWRSRKLISASAW 570
>Os03g0193000 GRAS transcription factor domain containing protein
Length = 535
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 176/421 (41%), Gaps = 61/421 (14%)
Query: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLR 249
Q++ C +AV +S L+ L + S G+ Q+L +Y L+GL ARL+++G +
Sbjct: 168 QVIAACGKAV-DENSWYRDLLISELRNMVSISGEPMQRLGAYMLEGLVARLSSTGHALYK 226
Query: 250 TLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEXXXXXXXXXXXXXX 309
+L SF+ L + E+ P+ FG+++ANGAI E+
Sbjct: 227 SLKCKEP--TSFELMSYMHLLY-EICPFFKFGYMSANGAIAEAV---------------- 267
Query: 310 XXXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQRVMR 369
+HI+D +QW T+++ALA R P+L I +
Sbjct: 268 ---KGENFVHIIDFQIAQGSQWATMIQALAARPGG-PPYLRITGIDDSNSAHARGGG-LD 322
Query: 370 EIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCVNALR---- 425
+G+RL A+ G+PF F AV R G + VN L
Sbjct: 323 IVGRRLFNIAQSCGLPFEFNAV--PAASHEVMLEHLDIRSG---EVIVVNFAYQLHHTPD 377
Query: 426 ---GVARGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEGLRF 482
G+ RD + ++ L PRVVT+V F + E L +
Sbjct: 378 ESVGIENHRDRILRMVKGLSPRVVTLVEQEANTNTAP------------FFNRYLETLDY 425
Query: 483 FSAYMDSLEESFPKTSNERLSLER-AVGRAIVDLVSCPASQSAERRETAASWARRMRSAG 541
++A ++++ + P+ +R+S E+ V R IV+L++C ++ ER E W R+ AG
Sbjct: 426 YTAMFEAIDVACPRDDKKRISTEQHCVARDIVNLIACEGAERVERHEPFGKWRARLSMAG 485
Query: 542 FSPAAFSEDVADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXXXXXFLAWKEQPVVWASAW 601
F P S V + ++ LL Y + + +L WK + +V +SAW
Sbjct: 486 FRPYPLSALVNNTIKKLLDSYHSYYKLE-----------ERDGALYLGWKNRKLVVSSAW 534
Query: 602 K 602
+
Sbjct: 535 R 535
>Os07g0589200 GRAS transcription factor domain containing protein
Length = 461
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 183/440 (41%), Gaps = 71/440 (16%)
Query: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGP-RTL 248
QLL+ CA A+ D+ QQ++W+LN +A GD +Q+L + FL L +R + +G + +
Sbjct: 66 QLLVHCANAIEANDATLTQQILWVLNNIAPADGDSNQRLTAAFLCALVSRASRTGACKAV 125
Query: 249 RTLATASDRNASFDSTRRTALK---FQELSPWTPFGHVAANGAILESFLEXXXXXXXXXX 305
+ +A+ R TA++ F +L+PW FG+ AAN AI+E+
Sbjct: 126 TAAVADAVESAALHVHRFTAVELASFIDLTPWHRFGYTAANAAIVEAVEGFPV------- 178
Query: 306 XXXXXXXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQ 365
+HI+DLS T C Q PTL++ LA R ++ P L +
Sbjct: 179 ------------VHIVDLSTTHCMQIPTLIDMLAGR-AEGPPILRLTVADVAPSAPPPAL 225
Query: 366 RV-MREIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXX-----XXXXXREGGATAALAVN 419
+ E+G +L FAR + FR V S +GG AL VN
Sbjct: 226 DMPYEELGAKLVNFARSRNMSMDFRVVPTSPADALTSLVDQLRVQQLVSDGG--EALVVN 283
Query: 420 CVNALRGV----------------ARGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXX 463
C L V R + SLR L+P +V VV
Sbjct: 284 CHMLLHTVPDETAGSVSLTTAQPPVSLRTMLLKSLRALDPTLVVVV------------DE 331
Query: 464 XXXXXXXXFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQS 523
V F D+++ PK S +R E VG + ++++ +
Sbjct: 332 DADFTAGDVVGRLRAAFNFLWIPYDAVDTFLPKGSEQRRWYEAEVGWKVENVLAQEGVER 391
Query: 524 AERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXX 583
ER+E W +RMR+AGF AAF E+ A +V+++L + GW M+
Sbjct: 392 VERQEDRTRWGQRMRAAGFRAAAFGEEAAGEVKAMLNDHAAGWGMK-----------RED 440
Query: 584 XXXFLAWKEQPVVWASAWKP 603
L WK VV+ASAW P
Sbjct: 441 DDLVLTWKGHNVVFASAWAP 460
>Os03g0690600 Similar to SCARECROW-like protein
Length = 731
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 151/383 (39%), Gaps = 53/383 (13%)
Query: 191 LLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRT 250
LL+ CA+AVA D + +L+ + + A P GD Q+LA F GL ARL +G +
Sbjct: 359 LLIHCAQAVAADDRRTANELLKQIRQHAKPNGDGSQRLAYCFADGLEARLAGTGSQLYHK 418
Query: 251 LATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEXXXXXXXXXXXXXXX 310
L + R + D + L + P+ H +N IL
Sbjct: 419 L--VAKRTTASDMLKAYHL-YLAACPFKRLSHFLSNQTIL-------------------S 456
Query: 311 XXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQRVMRE 370
+++HI+D F QWP L+ L R P L I +R+ E
Sbjct: 457 LTKNASKVHIIDFGIYFGFQWPCLIRRLFKREG-GPPKLRITGIDVPQPGFRPTERI-EE 514
Query: 371 IGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCVNALRG---- 426
GQRL ++A +GVPF ++ + E + VNC+ R
Sbjct: 515 TGQRLAEYAEKIGVPFEYQGIASKWETICVEDLNIKKDE-----VVIVNCLYRFRNLIDE 569
Query: 427 ---VARGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEGLRFF 483
+ R+ + ++R++ P + F+ F E L F
Sbjct: 570 TVAIDSPRNRVLNTIRQVNPAIFI------------HGIVNGSYSVPFFITRFREALFHF 617
Query: 484 SAYMDSLEESFPKTSNERLSLERAV-GRAIVDLVSCPASQSAERRETAASWARRMRSAGF 542
SA D LE + P+ +R +ER + GR +++++C S ER ET W R AGF
Sbjct: 618 SALFDMLETTVPRDDAQRALIERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGF 677
Query: 543 SPAAFSEDVA----DDVRSLLRR 561
+ ++D+ D V+ + +
Sbjct: 678 VQSPLNQDIVLKAKDKVKDIYHK 700
>Os12g0573200 GRAS transcription factor domain containing protein
Length = 738
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 154/378 (40%), Gaps = 48/378 (12%)
Query: 191 LLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRT 250
LL+ CA+AVA D + +L+ + + A P GD Q+LA F +GL AR+ +G ++
Sbjct: 361 LLIHCAQAVATDDRRSATELLKQIKQHAKPTGDATQRLAHCFAEGLQARIAGTGSLVHQS 420
Query: 251 LATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEXXXXXXXXXXXXXXX 310
L + R ++ D + L + + + +N I + L
Sbjct: 421 LV--AKRTSAVDILQAYQLYMAAIC-FKKVSFIFSNQTIYNASLGK-------------- 463
Query: 311 XXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQRVMRE 370
++HI+D + QWP L ++ R P + + +R+ E
Sbjct: 464 -----KKIHIVDYGIQYGFQWPCFLRRISQREGG-PPEVRMTGIDLPQPGFRPTERI-EE 516
Query: 371 IGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCVNALRG---- 426
G RL K+A+ GVPF + A+ L VNC +
Sbjct: 517 TGHRLSKYAQEFGVPFKYNAI----AAVKMESVRKEDLNIDPDEVLIVNCQYQFKNLMDE 572
Query: 427 ---VARGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEGLRFF 483
+ RD ++++R+++P V FV F E L F+
Sbjct: 573 SVVIDSPRDIVLSNIRKMQPHVFI------------HAIVNGSFSAPFFVTRFREALFFY 620
Query: 484 SAYMDSLEESFPKTSNERLSLERAV-GRAIVDLVSCPASQSAERRETAASWARRMRSAGF 542
SA D L+ + P+ S +RL +E+ + GRA +++++C ER ET W R + AGF
Sbjct: 621 SALFDVLDATTPRESEQRLLIEQNIFGRAALNVIACEGIDRVERPETYKQWQVRNQRAGF 680
Query: 543 SPAAFSEDVADDVRSLLR 560
+ ++ VR+ ++
Sbjct: 681 KQLPLNPEIVQVVRNKVK 698
>Os01g0902900
Length = 534
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 165/427 (38%), Gaps = 68/427 (15%)
Query: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLR 249
QLL+ CA AVA RD + L+ L A +G Q++AS F+QGL RL + P L
Sbjct: 161 QLLVACAEAVACRDRAQAAALLRELQAGAPVHGTAFQRVASCFVQGLADRLPLAHPPALG 220
Query: 250 TLATA----SDRNASFDSTRRTALKFQ-ELSPWTPFGHVAANGAILESFLEXXXXXXXXX 304
+ A A D R AL EL P+ F H AN +LE+F
Sbjct: 221 PASMAFCIPPSSCAGRDGARGEALALAYELCPYLRFAHFVANACMLEAF----------- 269
Query: 305 XXXXXXXXTPPTRLHILDLSNTFCT----QWPTLLEALATRSSDDTPHLSIXXXXXXXXX 360
+ +H++DL T QW LL+ LA R+S + +
Sbjct: 270 --------EGESNVHVVDLGMTLGLDRGHQWRGLLDGLAARASGKPARVRVTGVGARMD- 320
Query: 361 XXXXQRVMREIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNC 420
MR IG+ LE +A +G+ FR ++ E A+A+N
Sbjct: 321 ------TMRAIGRELEAYAEGLGMYLEFRGINRGLESLHIDDLGVDADE-----AVAINS 369
Query: 421 VNALRGVAR----GRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVF 476
V L V + ++ + ++R+L PR +V F+ F
Sbjct: 370 VLELHSVVKESRGALNSVLQTIRKLSPRAFVLV------------EQDAGHNGPFFLGRF 417
Query: 477 GEGLRFFSAYMDSLEESFPKTSNERLSLER-AVGRAIVDLVSCPASQSAERRETAASWAR 535
E L +++A D+L+ + P+ R +E+ G I ++V C + ER E A W R
Sbjct: 418 MEALHYYAALFDALDAALPRYDARRARVEQFHFGAEIRNVVGCEGAARVERHERADQWRR 477
Query: 536 RMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXXXXXFLAWKEQPV 595
RM AGF +A R L G L WK +PV
Sbjct: 478 RMSRAGFQSVPIK--MAAKAREWLDENAGGGGY---------TVAEEKGCLVLGWKGKPV 526
Query: 596 VWASAWK 602
+ AS WK
Sbjct: 527 IAASCWK 533
>Os11g0507300
Length = 772
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 161/421 (38%), Gaps = 60/421 (14%)
Query: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLT------TS 243
LL+ CA V+ D + + +L +ASP GD Q++AS+F L ARL+ ++
Sbjct: 403 HLLLACADLVSKGDHPAALRHLHLLRRVASPLGDSMQRVASHFADALAARLSLLSSPTSA 462
Query: 244 GPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEXXXXXXXX 303
P A A T + + P+ F H AN AI E+F
Sbjct: 463 SPSPRAAAAAAPYPFPPSPETLKVYQILYQACPYIKFAHFTANQAIFEAFHGE------- 515
Query: 304 XXXXXXXXXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXX 363
R+H++DL QWP L+ALA R P L +
Sbjct: 516 ------------DRVHVVDLDILQGYQWPAFLQALAARPG-GPPTLRLTGVGHPPA---- 558
Query: 364 XQRVMREIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCVNA 423
+RE G+ L A + VPF F A + R G ALAVN VN
Sbjct: 559 ---AVRETGRHLASLAASLRVPFEFHAA--AADRLERLRPAALHRRVG--EALAVNAVNR 611
Query: 424 LRGVARGR-DAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEGLRF 482
L V ++ +R P+++T+V F+ F E L +
Sbjct: 612 LHRVPSSHLPPLLSMIRDQAPKIITLV------------EQEAAHNGPYFLGRFLEALHY 659
Query: 483 FSAYMDSLEESFPKTSNERLSLERA-VGRAIVDLVSCPASQSAERRETAASWARRMRSAG 541
+SA DSL+ +FP S R+ +E+ + I ++V+C ++ R E W R M G
Sbjct: 660 YSAIFDSLDATFPAESTARMKVEQCLLAPEIRNVVACEGAERVARHERLERWRRLMEGRG 719
Query: 542 FSPAAFSEDVADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXXXXXFLAWKEQPVVWASAW 601
F S + LL Y G R L W+++ ++ ASAW
Sbjct: 720 FEAVPLSAAAVGQSQVLLGLYGAGDGYR---------LTEDSGCLLLGWQDRAIIAASAW 770
Query: 602 K 602
+
Sbjct: 771 R 771
>Os05g0110400 GRAS transcription factor domain containing protein
Length = 1387
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 144/364 (39%), Gaps = 57/364 (15%)
Query: 191 LLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRT 250
LL++CA+A+A + +L+ + A P GD Q+LA+ F GL ARL +G +
Sbjct: 1017 LLIQCAQAIASNNHPFASELLRKIRHHALPDGDGSQRLANCFADGLEARLAGTGSQMYEK 1076
Query: 251 LATASDRNASFDSTRRTALKFQEL----SPWTPFGHVAANGAILESFLEXXXXXXXXXXX 306
L ++ R LK L P+ + +N I+++
Sbjct: 1077 LMAKQ-------TSTRDMLKAYHLYFVACPFEMVTYYFSNKTIIDAL------------- 1116
Query: 307 XXXXXXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQR 366
T LHI+D F QWP L++ LA R P L I +R
Sbjct: 1117 ------EGKTTLHIVDFGILFGFQWPCLIQRLAKREG-GPPKLRITGVDVPQPGFRPHER 1169
Query: 367 VMREIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCVNALR- 425
+ E G+RL ++A + VPF + + E L +NC++ +R
Sbjct: 1170 I-EETGKRLAEYANMFNVPFQYHGIASRWETICIEDLSIDKDE-----VLIINCMSRMRK 1223
Query: 426 ------GVARGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEG 479
+ RD + ++R+ P+V + F+ F E
Sbjct: 1224 LGDETENIDSARDRVLHMMKRMNPQVFIL------------GVVNGLYSSPFFLTRFREV 1271
Query: 480 LRFFSAYMDSLEESFPKTSNERLSLERAV-GRAIVDLVSCPASQSAERRETAASWARRMR 538
L +S+ D L+ + P+ R+ +E+ + G ++ V+C ++ ER E+ W R+
Sbjct: 1272 LFHYSSLFDMLDNNVPRNHEARILVEKDLFGNDALNAVACEGAERIERPESYKQWQMRIL 1331
Query: 539 SAGF 542
AGF
Sbjct: 1332 RAGF 1335
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 146/375 (38%), Gaps = 52/375 (13%)
Query: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLR 249
LL+ CA+AVA D +L+ + + +SP GD +Q+LA Y + GL ARL G + R
Sbjct: 358 NLLIHCAQAVAADDRISASELVKKIRQHSSPDGDSNQRLAFYLVDGLEARLAGIGSQVYR 417
Query: 250 TLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEXXXXXXXXXXXXXX 309
L + S +S + + P+ AN IL++
Sbjct: 418 KLMAS---RTSAESLLKAYSLYLSACPFERASFAYANQTILDA----------------- 457
Query: 310 XXXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQRVMR 369
P ++HI+ QWP+L++ LA P L I + ++
Sbjct: 458 SKGQQPRKVHIVHFGICTGFQWPSLIQRLANEEG-GPPKLRITGIDMPQPGFHPCE-IIE 515
Query: 370 EIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCVNALRGVA- 428
E G+RL +A L VPF ++ + E L VNC+ ++ +
Sbjct: 516 ETGKRLADYANLFKVPFQYQGIASRWETVQIEDLNIDKDE-----VLIVNCMFRMKNLGD 570
Query: 429 ------RGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEGLRF 482
RD + +R + PRV + F+ F E L
Sbjct: 571 EMVSMNSARDRVLKIMRMMNPRVFIL------------GIVNGSYSSPFFITRFKEVLFH 618
Query: 483 FSAYMDSLEESFPKTSNERLSLERAV-GRAIVDLVSCPASQSAERRETAASWARRMRSAG 541
+S+ D ++ + P+ + R +E + G+ +++++C ++ ER E+ W R AG
Sbjct: 619 YSSLFDMIDANVPRDNEARKMIEGGLFGQEALNIIACEGAERTERPESYKQWQARCLKAG 678
Query: 542 FS-----PAAFSEDV 551
F PA E +
Sbjct: 679 FKQLPVDPATLKEII 693
>Os03g0707600 OsGAI
Length = 625
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 160/429 (37%), Gaps = 70/429 (16%)
Query: 192 LMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTL 251
L+ CA AV + + L+ + LA+ G +K+A+YF + L R+ P
Sbjct: 245 LLACAEAVQQENFAAAEALVKQIPTLAASQGGAMRKVAAYFGEALARRVYRFRP------ 298
Query: 252 ATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEXXXXXXXXXXXXXXXX 311
A ++ +A+F F E P+ F H AN AILE+F
Sbjct: 299 ADSTLLDAAFADLLHA--HFYESCPYLKFAHFTANQAILEAFAGCH-------------- 342
Query: 312 XTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQRVMREI 371
R+H++D QWP LL+ALA R P + ++++
Sbjct: 343 -----RVHVVDFGIKQGMQWPALLQALALRPGG-PPSFRLTGVGPPQPDETD---ALQQV 393
Query: 372 GQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCVNALRGVAR-- 429
G +L +FA + V F +R + + E A V VN++ + R
Sbjct: 394 GWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEADANEEPEVIAVNSVFELHRLL 453
Query: 430 ----GRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEGLRFFSA 485
+ + ++ + PR+VTVV F+ F E L ++S
Sbjct: 454 AQPGALEKVLGTVHAVRPRIVTVVEQEANHNSGS------------FLDRFTESLHYYST 501
Query: 486 YMDSLE------------ESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASW 533
DSLE + +++ E +GR I ++V+C ++ ER ET W
Sbjct: 502 MFDSLEGGSSGQAELSPPAAGGGGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQW 561
Query: 534 ARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXXXXXFLAWKEQ 593
R+ AGF P + +LL + G R L W +
Sbjct: 562 RNRLGRAGFEPVHLGSNAYKQASTLLALFAGGDGYRVEEKEGCLT---------LGWHTR 612
Query: 594 PVVWASAWK 602
P++ SAW+
Sbjct: 613 PLIATSAWR 621
>Os11g0124300 Similar to SCARECROW
Length = 651
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 167/416 (40%), Gaps = 65/416 (15%)
Query: 194 ECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLAT 253
+CA +V + + + + ELA+P+G Q++A+YF + + ARL +S L
Sbjct: 289 QCAESVNADNLDEAHRALLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPN 348
Query: 254 ASDRNASFDSTRRTALK-FQELSPWTPFGHVAANGAILESFLEXXXXXXXXXXXXXXXXX 312
S A A + F +SP+ F H AN AI E+F
Sbjct: 349 PSPAAARLHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFERE---------------- 392
Query: 313 TPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQRVMREIG 372
R+HI+DL QWP L LA+R P + + + G
Sbjct: 393 ---ERVHIIDLDIMQGLQWPGLFHILASRPG-GPPRVRL-------TGLGASMEALEATG 441
Query: 373 QRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCV-NALRGVARGR 431
+RL FA +G+PF F V RE A+AV+ + ++L V
Sbjct: 442 KRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRRE-----AVAVHWLRHSLYDVTGSD 496
Query: 432 DAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEGLRFFSAYMDSLE 491
+ ++RL P+VVT+V F+ F E + ++SA DSL+
Sbjct: 497 SNTLWLIQRLAPKVVTMV-------------EQDLSHSGSFLARFVEAIHYYSALFDSLD 543
Query: 492 ESFPKTSNERLSLERA-VGRAIVDL--VSCPASQSAERRETAASWARRMRSAGFSPAAFS 548
S+ + S ER +E+ + R I ++ V PA + SW ++ +GF ++ +
Sbjct: 544 ASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK---FGSWREKLAQSGFRVSSLA 600
Query: 549 EDVADDVRSLLRRY-KEGWSMRXXXXXXXXXXXXXXXXXFLAWKEQPVVWASAWKP 603
A LL + +G+++ L WK+ ++ ASAW+P
Sbjct: 601 GSAAAQAVLLLGMFPSDGYTLIEENGALK-----------LGWKDLCLLTASAWRP 645
>Os12g0136400
Length = 585
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 153/376 (40%), Gaps = 54/376 (14%)
Query: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLR 249
+LLM CA+AVA + + +L+ + +SP GD ++LA YF GL ARL + R
Sbjct: 169 ELLMSCAQAVASGNRRSAGELLEQIKRHSSPTGDATERLAHYFADGLEARLAGAASLEHR 228
Query: 250 TLATASDRNASFDSTRRTALKFQELSPWTPFGHVA---ANGAILESFLEXXXXXXXXXXX 306
LA+A +R ++ + +Q F VA AN AIL +
Sbjct: 229 LLASAEERASAMELLE----AYQVFMAACCFKWVAFTFANMAILRA-------------- 270
Query: 307 XXXXXXTPPTRLHILDLSNTF-CTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQ 365
+++HI+D + QWP+LL+ LA R P + + +
Sbjct: 271 -----AEGRSKVHIVDYGGQYHGLQWPSLLQRLAEREGG-PPEVRMTLVGHPQPGFRPAR 324
Query: 366 RVMREIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCVNAL- 424
R+ R G+RL AR G+PF FRAV + AA+ VN V +L
Sbjct: 325 RLER-TGRRLSNCARAFGLPFKFRAVAAARWETVTAEDVVGVDHD--EAAVVVNDVLSLG 381
Query: 425 -----RGV---ARGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVF 476
GV RD + S+R + P V F F
Sbjct: 382 TLMDESGVFDDPSPRDTVLGSIRDMRPAVFV------------QAVVNGAHGAPFFPTRF 429
Query: 477 GEGLRFFSAYMDSLEESFPKT-SNERLSLERAV-GRAIVDLVSCPASQSAERRETAASWA 534
E L FFSA D L+ + P+ S+ R LER V RA V +++ ++ ER ET W
Sbjct: 430 REALFFFSALFDMLDATTPEEGSHLRAVLERDVLRRAAVGVIAGEGAERVERPETYRRWQ 489
Query: 535 RRMRSAGFSPAAFSED 550
R R AG A D
Sbjct: 490 ARNRRAGLRQVAVEAD 505
>Os12g0122000 SCARECROW
Length = 660
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 144/354 (40%), Gaps = 53/354 (14%)
Query: 194 ECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLAT 253
+CA +V + + + + ELA+P+G Q++A+YF + + ARL +S L +
Sbjct: 298 QCAESVNADNLDEAHRALLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPS 357
Query: 254 ASDRNASFDSTRRTALK-FQELSPWTPFGHVAANGAILESFLEXXXXXXXXXXXXXXXXX 312
S A A + F +SP+ F H AN AI E+F
Sbjct: 358 PSPAGARVHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFERE---------------- 401
Query: 313 TPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQRVMREIG 372
R+HI+DL QWP L LA+R P + + + G
Sbjct: 402 ---ERVHIIDLDIMQGLQWPGLFHILASRPG-GPPRVRL-------TGLGASMEALEATG 450
Query: 373 QRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCV-NALRGVARGR 431
+RL FA +G+PF F V RE A+AV+ + ++L V
Sbjct: 451 KRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRRE-----AVAVHWLRHSLYDVTGSD 505
Query: 432 DAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEGLRFFSAYMDSLE 491
+ ++RL P+VVT+V F+ F E + ++SA DSL+
Sbjct: 506 SNTLWLIQRLAPKVVTMV-------------EQDLSHSGSFLARFVEAIHYYSALFDSLD 552
Query: 492 ESFPKTSNERLSLERA-VGRAIVDL--VSCPASQSAERRETAASWARRMRSAGF 542
S+ + S ER +E+ + R I ++ V PA + SW ++ +GF
Sbjct: 553 ASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK---FGSWREKLAQSGF 603
>Os03g0263300
Length = 575
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 161/429 (37%), Gaps = 54/429 (12%)
Query: 190 QLLMECARAVAGRDSQR--VQQLMWMLNELASPYGDVD------QKLASYFLQGLFARLT 241
LLM A A++G R + ++ L E+ S + ++LA++F L L
Sbjct: 134 HLLMAAAEALSGPHKSRELARVILVRLKEMVSHTASANAAASNMERLAAHFTDALQGLLD 193
Query: 242 TSGPRTLRTLATASDRNASFDSTRRTALK-FQELSPWTPFGHVAANGAILESFLEXXXXX 300
S P A+ + TA + Q++SP+ FGH AN AILE+
Sbjct: 194 GSHPVGGSGRQAAAAASHHHAGDVLTAFQMLQDMSPYMKFGHFTANQAILEAV------- 246
Query: 301 XXXXXXXXXXXXTPPTRLHILDLSNTFCTQWPTLLEALATRSSD-DTPHLSIXXXXXXXX 359
+ R+HI+D QW +L++A+ +R+ PHL I
Sbjct: 247 ------------SGDRRVHIVDYDIAEGIQWASLMQAMTSRADGVPAPHLRITAVSRSGG 294
Query: 360 XXXXXQRVMREIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVN 419
R ++E G+RL FA +G PFSF + AL N
Sbjct: 295 GGA---RAVQEAGRRLSAFAASIGQPFSFGQCRLDSDERFRPATVRMVK----GEALVAN 347
Query: 420 CV-------NALRGVARGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXF 472
CV +R +F++ + L ++VTVV F
Sbjct: 348 CVLHQAAATTTIRRPTGSVASFLSGMAALGAKLVTVVEEEGEAEKDDDGDSAGDAAAGGF 407
Query: 473 VKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAAS 532
V+ F E L +SA DSLE FP S R +ER + + A + + E
Sbjct: 408 VRQFMEELHRYSAVWDSLEAGFPTQSRVRGLVERVILAPNIAGAVSRAYRGVD-GEGRCG 466
Query: 533 WARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXXXXXFLAWKE 592
W + MR +GF+ S R LL + +G+++ L WK
Sbjct: 467 WGQWMRGSGFTAVPLSCFNHSQARLLLGLFNDGYTVE----------ETGPNKIVLGWKA 516
Query: 593 QPVVWASAW 601
+ ++ AS W
Sbjct: 517 RRLMSASVW 525
>Os03g0723000 GRAS transcription factor domain containing protein
Length = 578
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 155/428 (36%), Gaps = 73/428 (17%)
Query: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLT--TSGPRT 247
Q L+ C+RA A +L + A+ GD ++LA YF L RL T P +
Sbjct: 209 QSLLSCSRAAATDPGLAAAELA-SVRAAATDAGDPSERLAFYFADALSRRLACGTGAPPS 267
Query: 248 LRTLATASDRNASFDSTRRTALKFQELS---PWTPFGHVAANGAILESFLEXXXXXXXXX 304
++ +A F S T L ++ L+ P++ F H+ AN AILE+
Sbjct: 268 -------AEPDARFASDELT-LCYKTLNDACPYSKFAHLTANQAILEA------------ 307
Query: 305 XXXXXXXXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXX 364
T++HI+D QW LL+ALATR + I
Sbjct: 308 -------TGAATKIHIVDFGIVQGIQWAALLQALATRPEGKPTRIRITGVPSPLLGPQPA 360
Query: 365 QRVMREIGQRLEKFARLMGVPFSF----RAVHHSGXXXXXXXXXXXXREGGATAALAVNC 420
+ RL FA+L+GV F F R VH A+AVN
Sbjct: 361 AS-LAATNTRLRDFAKLLGVDFEFVPLLRPVHELNKSDFLVEPDE---------AVAVNF 410
Query: 421 VNALRGVARGRDAFVASLRR----LEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVF 476
+ L + D V + R L P VVT+ FV F
Sbjct: 411 MLQLYHLLGDSDELVRRVLRLAKSLSPAVVTL------------GEYEVSLNRAGFVDRF 458
Query: 477 GEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCP--ASQSAERRETAASWA 534
L ++ + +SL+ + + S ER+ +ER + + P + ER ++ W
Sbjct: 459 ANALSYYRSLFESLDVAMTRDSPERVRVERWMFGERIQRAVGPEEGADRTERMAGSSEWQ 518
Query: 535 RRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXXXXXFLAWKEQP 594
M GF P S LL Y + LAW+++P
Sbjct: 519 TLMEWCGFEPVPLSNYARSQADLLLWNYDSKYKYSLVELPPAFLS--------LAWEKRP 570
Query: 595 VVWASAWK 602
++ SAW+
Sbjct: 571 LLTVSAWR 578
>Os02g0681900 GRAS transcription factor domain containing protein
Length = 618
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 136/378 (35%), Gaps = 54/378 (14%)
Query: 190 QLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLR 249
QLL E A AVA + L+ L A+P GD +Q+L + + L +R+ T + L
Sbjct: 255 QLLSEAAAAVADGNHTAAASLLSALKLSANPRGDAEQRLVAMMVAALSSRVGTGPSQHLA 314
Query: 250 TLATASDRNASFDSTRRTALKF-QELSPWTPFGHVAANGAILESFLEXXXXXXXXXXXXX 308
L + R A + Q++SP AN AIL++
Sbjct: 315 DL---------YSGEHRAACQLLQDVSPCFGLALHGANLAILDAVAGHRA---------- 355
Query: 309 XXXXTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSIXXXXXXXXXXXXXQRVM 368
+H++D + Q L++ALA R T + +
Sbjct: 356 ---------IHLVDF-DVSAAQHVALIKALADRRVPATSLKVTVVADPTSPFTPAMTQSL 405
Query: 369 REIGQRLEKFARLMGVPFSFRAVHHSGXXXXXXXXXXXXREGGATAALAVNCVNALRGV- 427
+RL+K A+ G+ F FRAV E ALAVN L V
Sbjct: 406 AATCERLKKLAQQAGIDFRFRAVSCRAPEIEASKLGCEPGE-----ALAVNLAFTLSRVP 460
Query: 428 ------ARGRDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEGLR 481
A RD + +R L PRVVT+V F +
Sbjct: 461 DESVSPANPRDELLRRVRALGPRVVTLVEQELNTNTAP------------MAARFSDASA 508
Query: 482 FFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMRSAG 541
+ A ++SL+ + + S +R E A+ + + V ER E W R AG
Sbjct: 509 HYGAVLESLDATLGRDSADRTRAEAALASKVANAVGREGPDRVERCEVFGKWRARFGMAG 568
Query: 542 FSPAAFSEDVADDVRSLL 559
F A ED+ VR+ L
Sbjct: 569 FRAVAIGEDIGGRVRARL 586
>Os10g0369600 Similar to SCARECROW gene regulator-like (Phytochrome A signal
transduction 1 protein)
Length = 189
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 24/172 (13%)
Query: 431 RDAFVASLRRLEPRVVTVVXXXXXXXXXXXXXXXXXXXXXXFVKVFGEGLRFFSAYMDSL 490
RD + ++ L PR+VT+V F + E L +++A +S+
Sbjct: 40 RDRILRMVKSLSPRLVTLVEQESNTNTRP------------FFPRYLETLDYYTAMFESI 87
Query: 491 EESFPKTSNERLSLER-AVGRAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSE 549
+ + P+ R+S E+ V R IV+L++C ++ ER E W R+ AGF P S
Sbjct: 88 DVALPRDDKRRMSAEQHCVARDIVNLIACEGAERVERHEVFGKWKARLTMAGFRPYPLSS 147
Query: 550 DVADDVRSLLRRYKEGWSMRXXXXXXXXXXXXXXXXXFLAWKEQPVVWASAW 601
V +++LL Y + + +L WK + +V +SAW
Sbjct: 148 VVNSTIKTLLHTYNSFYRLE-----------ERDGVLYLGWKNRVLVVSSAW 188
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.133 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,993,848
Number of extensions: 362708
Number of successful extensions: 1024
Number of sequences better than 1.0e-10: 25
Number of HSP's gapped: 955
Number of HSP's successfully gapped: 27
Length of query: 603
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 496
Effective length of database: 11,448,903
Effective search space: 5678655888
Effective search space used: 5678655888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 159 (65.9 bits)