Os07g0583600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Chitin-inducible gibberellin-responsive protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0583600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Chitin-inducible gibberellin-responsive protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.47 | 0.259 | 13.6 | 0.378 | 0.244 | 0.671 | 0.255 | -1.02 | 0.0981 | 12.6 | 26.8 | 10 | -- | -- |
| 30.7 | 0.258 | 13.6 | 0.463 | 0.25 | 0.586 | 0.184 | -- | 0.115 | 12.6 | 26.75 | 10 | -- | -- |
| 30.72 | 0.258 | 13.6 | 0.411 | 0.241 | 0.66 | -- | -0.699 | 0.105 | 12.5 | 26.8 | 10 | -- | -- |
| 30.84 | 0.259 | 13.6 | 0.469 | 0.246 | 0.596 | -- | -- | 0.115 | 12.5 | 26.7 | 9 | -- | -- |
| 33.59 | 0.27 | 13.6 | 0.36 | -- | 0.832 | -- | -0.84 | 0.0816 | -- | 26.3 | 9 | -- | -- |
| 35.34 | 0.279 | 13.6 | 0.534 | 0.406 | -- | 0.336 | -- | 0.125 | 13.6 | -- | -- | -- | -- |
| 35.79 | 0.28 | 13.6 | 0.545 | 0.406 | -- | -- | -- | 0.127 | 13.5 | -- | -- | -- | -- |
| 33.77 | 0.272 | 13.6 | 0.435 | -- | 0.759 | -- | -- | 0.0921 | -- | 25.92 | 9 | -- | -- |
| 36.46 | 0.281 | 13.6 | -- | 0.214 | 0.694 | -- | -- | 0.0593 | 12 | 26.7 | 10 | -- | -- |
| 45.86 | 0.316 | 13.6 | 0.529 | -- | -- | -- | -- | 0.118 | -- | -- | -- | -- | -- |
| 43.63 | 0.309 | 13.6 | -- | 0.396 | -- | -- | -- | 0.066 | 13.5 | -- | -- | -- | -- |
| 38.65 | 0.29 | 13.6 | -- | -- | 0.809 | -- | -- | 0.0393 | -- | 25.83 | 9 | -- | -- |
| 53.25 | 0.341 | 13.6 | -- | -- | -- | -- | -- | 0.0593 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.55 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 21 |
| 5 | 27.91 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 18 |
| 13 | 28.29 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 9 |
| 48 | 28.97 | temperature | 30 | 90 | < th | dose independent | rect. | 5 | 16 |
| 54 | 29.05 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 16 | 3 |
| 56 | 29.06 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 11 |
| 74 | 29.25 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 16 |
| 91 | 29.36 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 15 | 4 |
| 107 | 29.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 111 | 29.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 123 | 29.51 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 5 |
| 197 | 29.83 | temperature | 10 | 270 | > th | dose dependent | sin | 3 | NA |
| 201 | 29.85 | temperature | 30 | 90 | < th | dose independent | rect. | 13 | 23 |
| 311 | 30.19 | temperature | 30 | 30 | < th | dose independent | rect. | 16 | 20 |
| 328 | 30.22 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 16 |
| 350 | 30.26 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 19 |
| 361 | 30.28 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 16 | 7 |
| 387 | 30.34 | temperature | 30 | 10 | < th | dose independent | rect. | 15 | 23 |
| 390 | 30.35 | temperature | 30 | 90 | < th | dose independent | rect. | 17 | 18 |
| 398 | 30.36 | humidity | 70 | 270 | > th | dose independent | rect. | 17 | 2 |
| 437 | 30.45 | temperature | 30 | 270 | < th | dose dependent | sin | 3 | NA |
| 473 | 30.51 | temperature | 30 | 10 | < th | dose independent | rect. | 9 | 14 |
| 486 | 30.54 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 17 | 4 |
| 491 | 30.55 | humidity | 60 | 270 | > th | dose independent | rect. | 15 | 5 |
| 564 | 30.66 | temperature | 25 | 10 | > th | dose dependent | sin | 22 | NA |
| 596 | 30.69 | radiation | 10 | 270 | < th | dose dependent | rect. | 17 | 2 |
| 611 | 30.70 | radiation | 20 | 270 | < th | dose dependent | rect. | 5 | 14 |
| 630 | 30.72 | temperature | 30 | 90 | < th | dose independent | rect. | 24 | 23 |
| 636 | 30.72 | radiation | 40 | 270 | < th | dose dependent | rect. | 5 | 15 |
| 653 | 30.75 | wind | 5 | 270 | < th | dose independent | rect. | 17 | 2 |
| 667 | 30.76 | temperature | 25 | 270 | > th | dose independent | rect. | 24 | 15 |
| 671 | 30.76 | radiation | 10 | 270 | < th | dose dependent | rect. | 8 | 11 |
| 687 | 30.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 734 | 30.82 | radiation | 10 | 270 | < th | dose independent | rect. | 15 | 4 |
| 787 | 30.86 | temperature | 30 | 10 | < th | dose independent | rect. | 9 | 12 |
| 789 | 30.86 | humidity | 50 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 791 | 30.86 | radiation | 10 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 799 | 30.87 | radiation | 10 | 270 | < th | dose independent | rect. | 13 | 7 |
| 802 | 30.87 | humidity | 50 | 270 | > th | dose dependent | rect. | 15 | 5 |
| 808 | 30.87 | radiation | 10 | 10 | < th | dose dependent | rect. | 9 | 14 |
| 828 | 30.89 | radiation | 40 | 270 | > th | dose independent | rect. | 12 | 1 |
| 850 | 30.90 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 853 | 30.91 | temperature | 30 | 10 | < th | dose independent | rect. | 5 | 23 |
| 859 | 30.91 | radiation | 10 | 90 | < th | dose dependent | sin | 20 | NA |
| 882 | 30.92 | radiation | 40 | 270 | < th | dose dependent | rect. | 15 | 19 |
| 897 | 30.94 | temperature | 30 | 10 | < th | dose independent | rect. | 2 | 21 |
| 900 | 30.94 | radiation | 30 | 270 | < th | dose dependent | rect. | 14 | 6 |
| 941 | 30.97 | radiation | 10 | 30 | < th | dose dependent | rect. | 6 | 17 |
| 959 | 30.99 | temperature | 30 | 10 | < th | dose independent | rect. | 24 | 23 |
| 963 | 30.99 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 994 | 31.02 | humidity | 90 | 270 | < th | dose independent | rect. | 9 | 7 |