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Os03g0707600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : OsGAI.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0155) R2 : 0.00408
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0445 (0.0325) R2dN8 : 0.00527 R2N8 : 0.00408
σ : 0.291
deviance : 38.86
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.06 0.24 12.3 0.491 0.468 -0.455 0.275 0.193 0.0898 1.59 20.1 10 -- --
26.1 0.238 12.3 0.491 0.463 -0.448 0.459 -- 0.0923 1.64 20.11 9 -- --
26.1 0.238 12.3 0.491 0.487 -0.474 -- 0.388 0.0819 1.43 20 13 -- --
26.93 0.242 12.3 0.483 0.475 -0.458 -- -- 0.0901 1.51 20 9 -- --
30.45 0.257 12.3 0.508 -- -0.133 -- 0.389 0.0992 -- 24.23 11 -- --
30.08 0.257 12.3 0.485 0.176 -- 0.535 -- 0.0971 5.67 -- -- -- --
30.63 0.259 12.3 0.489 0.187 -- -- -- 0.0954 6.68 -- -- -- --
31.14 0.26 12.3 0.493 -- -0.129 -- -- 0.0982 -- 23.27 6 -- --
32.88 0.267 12.3 -- 0.492 -0.475 -- -- 0.038 1.48 20.72 9 -- --
32.45 0.266 12.3 0.493 -- -- -- -- 0.0992 -- -- -- -- --
36.92 0.284 12.3 -- 0.193 -- -- -- 0.041 6.54 -- -- -- --
37.52 0.285 12.3 -- -- -0.134 -- -- 0.0456 -- 25 6 -- --
38.86 0.291 12.3 -- -- -- -- -- 0.0445 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.62 radiation 10.0 30 < th dose independent rect. 1 18
2 24.64 radiation 20.0 10 < th dose dependent rect. 1 18
18 25.20 radiation 20.0 10 < th dose dependent rect. 1 15
21 25.24 radiation 10.0 10 < th dose independent rect. 1 15
24 25.34 radiation 20.0 10 < th dose dependent rect. 6 23
25 25.35 radiation 20.0 10 < th dose dependent sin 3 NA
26 25.39 radiation 10.0 10 < th dose independent rect. 6 23
40 25.55 radiation 20.0 90 < th dose independent rect. 24 10
41 25.55 radiation 10.0 10 < th dose independent rect. 1 13
47 25.58 radiation 30.0 10 < th dose dependent rect. 1 10
50 25.59 radiation 20.0 10 < th dose dependent rect. 1 13
60 25.65 radiation 10.0 30 < th dose independent sin 2 NA
68 25.70 radiation 10.0 30 < th dose independent rect. 8 11
70 25.71 radiation 10.0 10 < th dose independent rect. 1 11
78 25.74 radiation 30.0 90 < th dose dependent rect. 24 10
94 25.81 radiation 10.0 30 < th dose independent rect. 6 13
112 25.86 radiation 20.0 10 < th dose dependent rect. 9 10
176 26.03 radiation 20.0 10 < th dose dependent rect. 12 23
185 26.05 radiation 10.0 270 < th dose dependent rect. 22 20
186 26.05 radiation 20.0 10 < th dose dependent rect. 15 23
188 26.06 radiation 20.0 10 < th dose dependent no NA NA
213 26.10 radiation 20.0 10 < th dose dependent rect. 21 23
225 26.13 radiation 10.0 10 > th dose independent sin 2 NA
248 26.17 radiation 20.0 10 < th dose dependent rect. 9 23
254 26.19 radiation 20.0 10 < th dose dependent rect. 17 23
265 26.23 radiation 10.0 270 < th dose independent rect. 22 10
293 26.30 radiation 10.0 30 > th dose independent rect. 7 10
296 26.30 radiation 30.0 90 < th dose independent rect. 13 15
298 26.30 radiation 10.0 10 > th dose independent rect. 17 23
326 26.36 radiation 10.0 10 > th dose independent no NA NA
327 26.36 radiation 10.0 10 > th dose independent rect. 6 12
506 26.43 radiation 30.0 270 < th dose independent rect. 12 5
516 26.44 temperature 15.0 270 > th dose dependent rect. 18 5
517 26.44 radiation 20.0 270 < th dose dependent rect. 22 10
527 26.46 radiation 10.0 10 > th dose independent rect. 14 23
536 26.47 radiation 40.0 90 < th dose dependent rect. 12 7
541 26.48 radiation 30.0 90 < th dose independent rect. 12 7
643 26.50 radiation 10.0 10 > th dose independent rect. 9 23
671 26.55 temperature 15.0 270 > th dose dependent rect. 19 2
679 26.56 radiation 10.0 10 < th dose independent rect. 17 23
707 26.60 radiation 20.0 30 < th dose independent rect. 12 23
708 26.60 radiation 10.0 10 < th dose independent rect. 21 23
771 26.67 radiation 1.0 4320 > th dose independent rect. 18 11
787 26.69 wind 1.0 14400 < th dose dependent rect. 2 2
846 26.71 radiation 1.0 90 < th dose dependent rect. 4 21
849 26.72 radiation 10.0 10 < th dose independent no NA NA
851 26.72 radiation 10.0 10 < th dose independent rect. 15 23
860 26.73 radiation 10.0 10 < th dose independent rect. 9 23
868 26.74 humidity 80.0 10 > th dose independent rect. 1 10
922 26.79 wind 1.0 14400 < th dose independent rect. 2 2
924 26.79 precipitation 0.1 90 < th dose independent rect. 4 21
928 26.79 radiation 40.0 90 < th dose dependent rect. 13 15
932 26.79 precipitation 0.1 90 < th dose dependent rect. 4 21
935 26.80 radiation 1.0 4320 > th dose independent rect. 18 1
980 26.83 humidity 80.0 90 > th dose independent rect. 24 10