Os07g0545800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chitin-inducible gibberellin-responsive protein.
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Os07g0545800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chitin-inducible gibberellin-responsive protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.81 | 0.325 | 11 | -0.0155 | 0.575 | -0.776 | 0.379 | -0.257 | -0.103 | 1.5 | 0.13 | 104 | -- | -- |
| 47.91 | 0.322 | 11 | -0.00183 | 0.566 | -0.764 | 0.097 | -- | -0.0922 | 1.54 | 0.1501 | 104 | -- | -- |
| 47.92 | 0.322 | 11 | -0.0347 | 0.572 | -0.774 | -- | 0.0301 | -0.107 | 1.54 | 0.1386 | 103 | -- | -- |
| 47.76 | 0.322 | 11 | -0.0326 | 0.533 | -0.739 | -- | -- | -0.104 | 1.78 | 0.1306 | 117 | -- | -- |
| 51.33 | 0.334 | 11 | -0.0471 | -- | -0.363 | -- | 0.161 | -0.0831 | -- | 0.13 | 98 | -- | -- |
| 55.81 | 0.35 | 11 | 0.0363 | 0.368 | -- | -0.159 | -- | -0.0491 | 11.3 | -- | -- | -- | -- |
| 55.91 | 0.35 | 11 | 0.0302 | 0.368 | -- | -- | -- | -0.0495 | 11.3 | -- | -- | -- | -- |
| 51.21 | 0.333 | 11 | -0.00141 | -- | -0.371 | -- | -- | -0.0792 | -- | 0.1312 | 97 | -- | -- |
| 47.78 | 0.322 | 11 | -- | 0.536 | -0.743 | -- | -- | -0.103 | 1.77 | 0.13 | 117 | -- | -- |
| 64.41 | 0.375 | 11 | 0.0207 | -- | -- | -- | -- | -0.0531 | -- | -- | -- | -- | -- |
| 55.93 | 0.35 | 11 | -- | 0.368 | -- | -- | -- | -0.0528 | 11.3 | -- | -- | -- | -- |
| 51.21 | 0.333 | 11 | -- | -- | -0.368 | -- | -- | -0.0806 | -- | 0.14 | 97 | -- | -- |
| 64.42 | 0.375 | 11 | -- | -- | -- | -- | -- | -0.0554 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.82 | temperature | 30.0 | 90 | < th | dose independent | rect. | 13 | 16 |
| 2 | 48.06 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 15 |
| 6 | 48.16 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 12 |
| 7 | 48.16 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 15 |
| 14 | 48.34 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 17 | 16 |
| 16 | 48.40 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 21 | 48.54 | temperature | 30.0 | 90 | < th | dose independent | rect. | 11 | 18 |
| 22 | 48.55 | radiation | 1.0 | 90 | > th | dose independent | sin | 10 | NA |
| 23 | 48.55 | radiation | 1.0 | 90 | < th | dose independent | sin | 10 | NA |
| 26 | 48.61 | radiation | 10.0 | 10 | > th | dose independent | rect. | 17 | 14 |
| 27 | 48.62 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 16 |
| 28 | 48.63 | radiation | 1.0 | 90 | < th | dose dependent | sin | 10 | NA |
| 29 | 48.68 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 31 | 48.71 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 22 |
| 40 | 48.84 | wind | 7.0 | 90 | < th | dose independent | rect. | 19 | 10 |
| 42 | 48.85 | humidity | 50.0 | 10 | < th | dose independent | rect. | 17 | 21 |
| 46 | 48.88 | radiation | 1.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 47 | 48.88 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 15 | 4 |
| 79 | 48.89 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 17 | 21 |
| 82 | 48.92 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 102 | 49.04 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 107 | 49.08 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 19 |
| 108 | 49.08 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 5 |
| 113 | 49.11 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 11 |
| 118 | 49.14 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 14 | 2 |
| 121 | 49.18 | humidity | 50.0 | 720 | > th | dose independent | rect. | 16 | 13 |
| 124 | 49.20 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 11 |
| 128 | 49.20 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 21 |
| 132 | 49.24 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 11 |
| 146 | 49.33 | temperature | 30.0 | 90 | > th | dose dependent | sin | 12 | NA |
| 147 | 49.33 | radiation | 1.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 149 | 49.34 | radiation | 1.0 | 90 | > th | dose independent | rect. | 16 | 19 |
| 156 | 49.41 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 1 | 15 |
| 161 | 49.43 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 164 | 49.43 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 181 | 49.49 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 1 | 16 |
| 183 | 49.49 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 15 | 4 |
| 199 | 49.50 | humidity | 60.0 | 90 | > th | dose independent | rect. | 13 | 16 |
| 221 | 49.52 | humidity | 50.0 | 720 | > th | dose independent | rect. | 16 | 5 |
| 222 | 49.52 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 224 | 49.53 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 14 |
| 232 | 49.56 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 10 |
| 234 | 49.56 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 10 |
| 236 | 49.56 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 10 |
| 237 | 49.56 | radiation | 20.0 | 90 | < th | dose independent | rect. | 19 | 10 |
| 240 | 49.56 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 241 | 49.56 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 244 | 49.57 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 19 | 10 |
| 274 | 49.60 | radiation | 1.0 | 90 | > th | dose independent | rect. | 15 | 22 |
| 282 | 49.63 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 294 | 49.67 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 20 |
| 302 | 49.70 | humidity | 60.0 | 270 | > th | dose independent | rect. | 11 | 16 |
| 318 | 49.74 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 3 |
| 320 | 49.75 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 19 |
| 323 | 49.76 | radiation | 40.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 324 | 49.76 | temperature | 30.0 | 720 | < th | dose independent | rect. | 8 | 4 |
| 330 | 49.76 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 350 | 49.79 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 19 |
| 352 | 49.80 | temperature | 30.0 | 720 | < th | dose independent | rect. | 8 | 12 |
| 354 | 49.80 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 23 |
| 358 | 49.81 | radiation | 1.0 | 90 | < th | dose dependent | no | NA | NA |
| 377 | 49.81 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 378 | 49.82 | radiation | 1.0 | 720 | < th | dose independent | rect. | 24 | 20 |
| 423 | 49.86 | humidity | 50.0 | 10 | < th | dose independent | sin | 8 | NA |
| 432 | 49.88 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 21 |
| 458 | 49.91 | humidity | 70.0 | 10 | > th | dose independent | rect. | 19 | 11 |
| 462 | 49.92 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 10 |
| 463 | 49.92 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 10 |
| 478 | 49.95 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 15 |
| 480 | 49.95 | radiation | 1.0 | 720 | > th | dose independent | rect. | 12 | 20 |
| 484 | 49.95 | humidity | 50.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 490 | 49.96 | radiation | 30.0 | 10 | < th | dose independent | rect. | 6 | 13 |
| 493 | 49.96 | radiation | 40.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 497 | 49.97 | radiation | 30.0 | 10 | < th | dose independent | rect. | 6 | 19 |
| 506 | 49.99 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 8 |
| 543 | 50.00 | temperature | 30.0 | 90 | > th | dose independent | rect. | 15 | 4 |
| 590 | 50.04 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 13 |
| 592 | 50.04 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 17 | 14 |
| 599 | 50.06 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 616 | 50.09 | radiation | 1.0 | 720 | < th | dose independent | sin | 11 | NA |
| 623 | 50.10 | temperature | 30.0 | 270 | > th | dose dependent | sin | 17 | NA |
| 632 | 50.11 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 643 | 50.12 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 13 |
| 676 | 50.16 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 20 |
| 693 | 50.18 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 19 | 10 |
| 701 | 50.19 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 8 | 8 |
| 709 | 50.19 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 720 | 50.20 | humidity | 60.0 | 270 | > th | dose independent | rect. | 9 | 19 |
| 731 | 50.21 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 778 | 50.23 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 5 | 3 |
| 796 | 50.25 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 23 |
| 801 | 50.26 | wind | 5.0 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 802 | 50.26 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 18 |
| 809 | 50.26 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 17 |
| 826 | 50.27 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 16 |
| 830 | 50.27 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 18 |
| 837 | 50.27 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 5 | 4 |
| 841 | 50.27 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 19 |
| 844 | 50.28 | temperature | 30.0 | 10 | > th | dose independent | rect. | 15 | 4 |
| 879 | 50.29 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 16 | 13 |
| 909 | 50.31 | radiation | 1.0 | 720 | > th | dose independent | sin | 11 | NA |
| 919 | 50.31 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 17 | 8 |
| 925 | 50.32 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 981 | 50.33 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 16 | 13 |
| 982 | 50.34 | wind | 5.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 997 | 50.35 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 14 |