BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0351800 Os03g0351800|AK070491
(283 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0351800 Zinc finger, RING-type domain containing protein 512 e-145
Os01g0802000 Zinc finger, RING-type domain containing protein 222 3e-58
Os05g0495000 178 3e-45
Os02g0767600 149 3e-36
Os05g0110000 Zinc finger, RING-type domain containing protein 133 1e-31
Os10g0487400 Zinc finger, RING-type domain containing protein 128 5e-30
Os06g0101300 Zinc finger, RING-type domain containing protein 126 2e-29
Os03g0812200 Zinc finger, RING-type domain containing protein 119 2e-27
Os05g0488800 Zinc finger, RING-type domain containing protein 112 3e-25
Os01g0972000 Zinc finger, RING-type domain containing protein 110 1e-24
Os01g0276600 Zinc finger, RING-type domain containing protein 108 6e-24
Os03g0271600 Zinc finger, RING-type domain containing protein 106 2e-23
Os03g0324900 Zinc finger, RING-type domain containing protein 103 1e-22
Os12g0118700 Zinc finger, RING-type domain containing protein 103 2e-22
Os11g0119200 Zinc finger, RING-type domain containing protein 101 8e-22
Os09g0434200 Zinc finger, RING-type domain containing protein 81 9e-16
Os02g0727700 Zinc finger, RING-type domain containing protein 79 3e-15
Os08g0487500 Zinc finger, RING-type domain containing protein 79 3e-15
Os08g0464400 Zinc finger, RING-type domain containing protein 75 4e-14
Os07g0631200 Zinc finger, RING-type domain containing protein 73 2e-13
Os02g0191500 Similar to Goliath homolog precursor (RING fin... 68 7e-12
Os06g0633500 Zinc finger, RING-type domain containing protein 68 7e-12
Os01g0844700 66 4e-11
>Os03g0351800 Zinc finger, RING-type domain containing protein
Length = 283
Score = 512 bits (1318), Expect = e-145, Method: Compositional matrix adjust.
Identities = 250/276 (90%), Positives = 250/276 (90%)
Query: 1 MSGGRQSYWCYQCRQRVRPRGQDMECPYCDSGFVSEMDDVDALMRHFVGMDPDFHRDPRF 60
MSGGRQSYWCYQCRQRVRPRGQDMECPYCDSGFVSEMDDVDALMRHFVGMDPDFHRDPRF
Sbjct: 1 MSGGRQSYWCYQCRQRVRPRGQDMECPYCDSGFVSEMDDVDALMRHFVGMDPDFHRDPRF 60
Query: 61 GIMEAISAVMRHGMAGTNREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLSEDNGFD 120
GIMEAISAVMRHGMAGTNREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLSEDNGFD
Sbjct: 61 GIMEAISAVMRHGMAGTNREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLSEDNGFD 120
Query: 121 VFINGRRGVGMRRANIADYFVGPGLDDLIEQLTQNDRRGPPPATQSSIDAMPTVKITQRH 180
VFINGRRGVGMRRANIADYFVGPGLDDLIEQLTQNDRRGPPPATQSSIDAMPTVKITQRH
Sbjct: 121 VFINGRRGVGMRRANIADYFVGPGLDDLIEQLTQNDRRGPPPATQSSIDAMPTVKITQRH 180
Query: 181 LSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELPPQSSTGAS 240
LSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELPPQSSTGAS
Sbjct: 181 LSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELPPQSSTGAS 240
Query: 241 CXXXXXXXXXXXXXXXXXXXXXXXXXXPFSFLWPFR 276
C PFSFLWPFR
Sbjct: 241 CSRTRSTNQSQSSSSNGRTNGRQRRRNPFSFLWPFR 276
>Os01g0802000 Zinc finger, RING-type domain containing protein
Length = 329
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/235 (47%), Positives = 149/235 (63%), Gaps = 6/235 (2%)
Query: 4 GRQSYWCYQCRQRVRPRGQDMECPYCDSGFVSEMDDVDALMRHFVGMDPDF--HRDPRFG 61
R ++WCY CR+ +R GQD+ CP C+ GF+ E+ ++ + + DP F RD FG
Sbjct: 3 NRATHWCYACRRPIRVSGQDITCPNCNDGFIQEISEIGGSLNTYGIFDPSFDERRDRSFG 62
Query: 62 IMEAISAVMRHGMA--GTNREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLSEDNG- 118
++EA+S +MR MA G NR +D G S + P L+F P +S +
Sbjct: 63 MVEAMSDLMRQRMAEMGRNRVLDFHGTRGASSHQGRQPTVRPMLIFGSNAPDRVSSSSEE 122
Query: 119 FDVFINGRRGVGMRRANIADYFVGPGLDDLIEQLT-QNDRRGPPPATQSSIDAMPTVKIT 177
D+ + R +G R N + + VGP L+ L EQL N+R+GPPPA QS+ID+MP VKI
Sbjct: 123 ADILLRQGRRIGADRPNFSRFLVGPSLEALFEQLLLHNNRQGPPPAPQSAIDSMPVVKIN 182
Query: 178 QRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELP 232
RHL D HCPVC DKFE+G+EAREMPCKHLYH++CI+PWL QHNSCPVCR+ LP
Sbjct: 183 LRHLRDDPHCPVCTDKFEVGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
>Os05g0495000
Length = 350
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/241 (46%), Positives = 138/241 (57%), Gaps = 35/241 (14%)
Query: 5 RQSYWCYQCRQRVRPRG--QDMECPYCDSGFVSEMDDVD----ALMRHFVGMDP-DFHRD 57
R ++WCY CR+ VR RG QD+ CP CD GFV EM ++ + FVG D D
Sbjct: 68 RATHWCYVCRRPVRIRGGSQDVTCPSCDDGFVQEMSEMGRRTASSTLGFVGPDAGDEFLL 127
Query: 58 PRFGIMEAISAVMRHG--MAGTNREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLSE 115
R +MEA+S +MRH + G REVDV E G G +P H
Sbjct: 128 RRSPVMEAMSTLMRHAATVGGDEREVDVHD----------EHGGG------DGVPAHAR- 170
Query: 116 DNGFDVFINGRRGVGMRRANIADYFVGPGLDDLIEQLTQ---NDRRGPPPATQSSIDAMP 172
V G VG+ R Y+ GL+ L EQL + R+GPPPA S+IDAMP
Sbjct: 171 ---LGVLFRGGPRVGVERRG--GYYRA-GLEALFEQLQNQLGSSRQGPPPAPPSAIDAMP 224
Query: 173 TVKITQRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELP 232
V I++RHL + CPVC+D+F+LG+EAREMPC HLYH+DCIVPWL HNSCPVCR+ LP
Sbjct: 225 VVTISRRHLRAEPRCPVCQDEFQLGAEAREMPCAHLYHADCIVPWLVHHNSCPVCRHSLP 284
Query: 233 P 233
P
Sbjct: 285 P 285
>Os02g0767600
Length = 335
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 83/104 (79%)
Query: 137 ADYFVGPGLDDLIEQLTQNDRRGPPPATQSSIDAMPTVKITQRHLSGDSHCPVCKDKFEL 196
+YF GP L++LIE+LTQNDR GP PA S+ID++PTV+IT HLS S CPVCK+ FEL
Sbjct: 149 GNYFNGPNLNNLIEELTQNDRPGPAPAPSSAIDSLPTVQITGAHLSDGSQCPVCKEDFEL 208
Query: 197 GSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELPPQSSTGAS 240
G AR+MPCKH+YHSDCIVPWL HNSCPVCRY+L ++ G++
Sbjct: 209 GEAARQMPCKHVYHSDCIVPWLRLHNSCPVCRYQLLSSAAAGSN 252
>Os05g0110000 Zinc finger, RING-type domain containing protein
Length = 333
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 88/132 (66%), Gaps = 8/132 (6%)
Query: 113 LSEDNGFDVFINGRRGVGMRR--ANIADYFVGPGLDDLIEQLTQNDRRG------PPPAT 164
L+ F++F + G G+R ++D+ +G G + L++QLTQ + G PPA+
Sbjct: 61 LAAATSFELFYDDGAGSGLRPLPETMSDFLMGSGFERLLDQLTQIEAGGLARARENPPAS 120
Query: 165 QSSIDAMPTVKITQRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSC 224
++S+++MPTV I H+ DSHC VCK+ FELG EAREMPC H+YH DCI+PWL NSC
Sbjct: 121 KASVESMPTVTIAASHVGADSHCAVCKEPFELGDEAREMPCSHIYHQDCILPWLALRNSC 180
Query: 225 PVCRYELPPQSS 236
PVCR+E+P ++
Sbjct: 181 PVCRHEMPTDAA 192
>Os10g0487400 Zinc finger, RING-type domain containing protein
Length = 304
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 82/118 (69%), Gaps = 5/118 (4%)
Query: 120 DVFINGRRGVG-MRRANIADYFVGPGLDDLIEQLTQND--RRGPPPATQSSIDAMPTVKI 176
D + G+G + A+ DYFVGPGL+ LIEQLT+ND R G PPA +S++ +P V +
Sbjct: 98 DASVGLAPGIGRVGGASFGDYFVGPGLEQLIEQLTENDPNRYGTPPAAKSALSTLPDVVV 157
Query: 177 TQRHLSG--DSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELP 232
T ++ + C VCK+ F G A++MPCKH+YH+DCI+PWL+ HNSCP+CR+ELP
Sbjct: 158 TDAMVAAADGAECAVCKEDFSPGEGAKQMPCKHIYHADCIMPWLDLHNSCPICRFELP 215
>Os06g0101300 Zinc finger, RING-type domain containing protein
Length = 338
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 117/258 (45%), Gaps = 50/258 (19%)
Query: 6 QSYWCYQCRQRV-----RPRGQDMECPYCDSGFVSEMDDVDALMRHFVGMDPDFHRDPRF 60
Q ++C+QC + V D+ CP+C GFV E+ + D P P F
Sbjct: 9 QRFYCHQCDRTVPIPPPTSPDADVLCPFCGGGFVEELGE-DINPNPNPNPSPFLPHHPFF 67
Query: 61 GIMEAISAVMRHGMAGTNREVDVRGRPNIFSDLEMEFGSG--------------PWLLFR 106
+ D+R SDL FG P
Sbjct: 68 PF--------------ASPSFDLRNP----SDLAAFFGPPSPSPSPSPAARHFDPSNFLH 109
Query: 107 GQLPGHLSEDNGFDVFINGRRGVGMRRA--------NIADYFVGPGLDDLIEQLTQND-- 156
G LS + + G ++ DYFVG GL+ LI+QL +ND
Sbjct: 110 DHFTGLLSGGATIQIVLEGSSASLPLGGAAAGPGGISLGDYFVGSGLEQLIQQLAENDPN 169
Query: 157 RRGPPPATQSSIDAMPTVKITQRHLSGD--SHCPVCKDKFELGSEAREMPCKHLYHSDCI 214
R G PPA +S++ A+P V ++ ++ D + C VC D F LG+ A+++PCKH++H DCI
Sbjct: 170 RYGTPPAAKSAVAALPDVAVSADMMAADGGAQCAVCMDDFHLGAAAKQLPCKHVFHKDCI 229
Query: 215 VPWLEQHNSCPVCRYELP 232
+PWL+ H+SCPVCR+ELP
Sbjct: 230 LPWLDLHSSCPVCRFELP 247
>Os03g0812200 Zinc finger, RING-type domain containing protein
Length = 369
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 85/130 (65%), Gaps = 12/130 (9%)
Query: 109 LPGHLSEDNGFDVFINGRRGVGMRRANIADYFVGPGLDDLIEQLTQND--RRGPPPATQS 166
L G D+ D N GV ++ DYF+GPGLD L++ L ++D R G PPA +
Sbjct: 185 LQGTFGPDDNQDDSSNTSSGV-----SLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKE 239
Query: 167 SIDAMPTVKITQRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPV 226
+++A+PTV I Q L C VC + FE+G+EA+EMPC+H +HS CI+PWLE H+SCP+
Sbjct: 240 AVEALPTVNI-QEVLG----CSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPI 294
Query: 227 CRYELPPQSS 236
CR++LP + S
Sbjct: 295 CRFQLPTEES 304
>Os05g0488800 Zinc finger, RING-type domain containing protein
Length = 323
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 121/262 (46%), Gaps = 49/262 (18%)
Query: 9 WCYQ---------CRQRVRPRGQDMECPYCDSGFVSEMDD--VDALMRH-----FVGMDP 52
WC Q C +V +++CP C GFV EM D ++ L F +P
Sbjct: 2 WCRQPKDLQDGRSCNHKVLAMVDEIKCPSCGGGFVEEMTDEEIERLTNRQPEPGFSQWNP 61
Query: 53 DFH---------RDPRFGIMEAISAVMRHGMAGTNREVDVRGRPNIFSDLEMEFGS---- 99
H D G E + RH A T R V ++ D E +
Sbjct: 62 IEHPGETMDSDDEDNDLG-REFEGFIRRHRRASTLRRVLDSIHDDLADDQERDSSILINA 120
Query: 100 -GPWLLFRGQL--PGHLSEDNGFDVFINGRRGVGMRRANIADYFVGPGLDDLIEQLTQND 156
L +G + P D G +G + +Y +G GL L++ L ++D
Sbjct: 121 FNQALALQGSVLDPDEGQGDQGGSTNDDGL---------LEEYVLGAGLSLLLQHLAESD 171
Query: 157 --RRGPPPATQSSIDAMPTVKITQRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCI 214
R G PPA + +++A+PTVKI + C VC D E+GS+A++MPC+H +HS CI
Sbjct: 172 PSRNGTPPAKKEAVEALPTVKIEEV-----VSCSVCLDDLEVGSQAKQMPCEHKFHSSCI 226
Query: 215 VPWLEQHNSCPVCRYELPPQSS 236
+PWLE H+SCPVCR+ELP + +
Sbjct: 227 LPWLELHSSCPVCRFELPSEET 248
>Os01g0972000 Zinc finger, RING-type domain containing protein
Length = 334
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 64/90 (71%)
Query: 143 PGLDDLIEQLTQNDRRGPPPATQSSIDAMPTVKITQRHLSGDSHCPVCKDKFELGSEARE 202
P D L+ ++ PPA+++++D+MPT+ I HL+ DSHC VCK+ F L +EARE
Sbjct: 87 PLFDRLLLRIPSASDNPNPPASKAAVDSMPTILIGACHLAADSHCAVCKEPFHLAAEARE 146
Query: 203 MPCKHLYHSDCIVPWLEQHNSCPVCRYELP 232
MPC H+YH +CI+PWL HNSCPVCR+ +P
Sbjct: 147 MPCAHIYHHNCILPWLALHNSCPVCRHRMP 176
>Os01g0276600 Zinc finger, RING-type domain containing protein
Length = 329
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
Query: 136 IADYFVGPGLDDLIEQLTQND--RRGPPPATQSSIDAMPTVKITQRHLSGDSHCPVCKDK 193
+ADYF+GPGLD L++++ D R+G PA + ++++MPTV++ DS C VC +
Sbjct: 161 LADYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGG-DCDSACAVCLED 219
Query: 194 FELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELP 232
+ G A EMPC+H +H+ CIVPWL+ H+SCPVCR++LP
Sbjct: 220 YAAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLP 258
>Os03g0271600 Zinc finger, RING-type domain containing protein
Length = 279
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 85/134 (63%), Gaps = 13/134 (9%)
Query: 101 PWLLFRGQLPGHLSEDNGFDVFINGRRGVGMRR--ANIADYFVGPGLDDLIEQLTQNDRR 158
P ++ RG G LS GF+++ + G G+R +++ +G G L++Q ++ +
Sbjct: 56 PVIVLRG---GSLS---GFELYYDDGSGDGLRPLPGDVSHLLMGSGFHRLLDQFSRLEAA 109
Query: 159 GP-PPATQSSIDAMPTVKITQRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPW 217
P PPA+++++++MP+V + +HC VC++ FE G+ AREMPCKH+YH DCI+PW
Sbjct: 110 APRPPASKAAVESMPSVTVA----GSGAHCAVCQEAFEPGASAREMPCKHVYHQDCILPW 165
Query: 218 LEQHNSCPVCRYEL 231
L NSCPVCR EL
Sbjct: 166 LSLRNSCPVCRREL 179
>Os03g0324900 Zinc finger, RING-type domain containing protein
Length = 320
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Query: 156 DRRGPPPATQSSIDAMPTVKITQRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIV 215
+R+G PPA + ++ A+PTV++ H + + CPVC D+FE G EAREMPCKH +H CI+
Sbjct: 184 NRQGTPPARKEAVAALPTVRV---HDAAGATCPVCLDEFEAGGEAREMPCKHRFHDGCIL 240
Query: 216 PWLEQHNSCPVCRYELP 232
PWLE H+SCPVCRY+LP
Sbjct: 241 PWLEAHSSCPVCRYQLP 257
>Os12g0118700 Zinc finger, RING-type domain containing protein
Length = 499
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 135 NIADYFVGPGLDDLIEQLTQND--RRGPPPATQSSIDAMPTVKITQRH-LSGDSHCPVCK 191
N DY + L+EQ +++ RRG PPA S I+ +P+V I+ H +GD CPVCK
Sbjct: 279 NPDDYVDARQFEMLLEQFAEDNDSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCK 338
Query: 192 DKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELP 232
D + A+++PC HLYHS CI+PWL N+CPVCRYELP
Sbjct: 339 DPIPTRARAKQLPCMHLYHSSCILPWLSSRNTCPVCRYELP 379
>Os11g0119200 Zinc finger, RING-type domain containing protein
Length = 491
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 39 DVDALMRHFVGMDPDFHRD-PRFGIMEAISAVMRHGMAGTNREVDVRGRPNIFSDLEMEF 97
D+D + D D D G E I+ + +H ++ + G S+ E E
Sbjct: 184 DIDPMNARLDQWDSDDQEDVEESGFDETINTMTQHQQQS--HDIQLSG----LSEDESED 237
Query: 98 GSGPWLLFRGQLPGHLSEDNGFDVFINGRRGVGMRRA---NIADYFVGPGLDDLIEQLTQ 154
G W + Q + + G MR N DY + L+EQ +
Sbjct: 238 GVWNWSVAVRQRANVTN-------LLEDMEGPEMRTTFVGNPDDYVDARQFEMLLEQFAE 290
Query: 155 ND--RRGPPPATQSSIDAMPTVKITQRH-LSGDSHCPVCKDKFELGSEAREMPCKHLYHS 211
++ RRG PPA S I+ +P+V I+ H ++ D CPVCKD + A+++PC HLYHS
Sbjct: 291 DNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLYHS 350
Query: 212 DCIVPWLEQHNSCPVCRYELP 232
CI+PW N+CPVCRYELP
Sbjct: 351 SCILPWFSSRNTCPVCRYELP 371
>Os09g0434200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Query: 145 LDDLIEQLTQNDRRGP--PPATQSSIDAMPTVKITQR---HLSGDSHCPVCKDKFELGSE 199
L+ +E+ QN P PPA++ + +P V +T+ L ++ C VC++ + +
Sbjct: 193 LEAALEESLQNVMANPKVPPASKEVVANLPVVTVTEEIIARLGKETQCAVCRESLLVDDK 252
Query: 200 AREMPCKHLYHSDCIVPWLEQHNSCPVCRYEL 231
+E+PCKHL+H C+ PWL+++NSCP+CR+EL
Sbjct: 253 MQELPCKHLFHPPCLKPWLDENNSCPICRHEL 284
>Os02g0727700 Zinc finger, RING-type domain containing protein
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 168 IDAMPTVKITQRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVC 227
++++PTV + GD+ C VCKD E G AR +PC HLYH CI+PWL N+CP+C
Sbjct: 214 VESLPTVVVDAAR--GDTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPLC 271
Query: 228 RYELP 232
R+ELP
Sbjct: 272 RHELP 276
>Os08g0487500 Zinc finger, RING-type domain containing protein
Length = 271
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 158 RGPPPATQSSIDAMPTVKITQRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPW 217
+ PPA +S+++A+P+ + C VC+D G + +PC H YH +CI+PW
Sbjct: 180 KSKPPAARSAVEALPSAVVAAGEDGEGEECAVCRDGVAAGERVKRLPCSHGYHEECIMPW 239
Query: 218 LEQHNSCPVCRYELP 232
L+ NSCP+CR+ELP
Sbjct: 240 LDVRNSCPLCRFELP 254
>Os08g0464400 Zinc finger, RING-type domain containing protein
Length = 211
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Query: 171 MPTVKITQRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYE 230
+PTV++++ + C +CKD L + AR +PC HLYHS+CIV WLE NSCPVCR
Sbjct: 62 LPTVEVSEPATA----CAICKDDLPLAAPARRLPCGHLYHSECIVQWLEMRNSCPVCRSR 117
Query: 231 LP---PQSSTGAS 240
LP PQ + S
Sbjct: 118 LPSDEPQDAAAPS 130
>Os07g0631200 Zinc finger, RING-type domain containing protein
Length = 185
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 159 GPPPATQSSIDAMPTVKITQRHLSGDS--HCPVCKDKFELGSEAREMPCKHLYHSDCIVP 216
G PPA++++I ++ VK + GDS C +C D F G +EMPC H +HS+C+
Sbjct: 59 GVPPASKAAIASLKEVKAGEDGEGGDSLGDCAICLDAFAAG---KEMPCGHRFHSECLER 115
Query: 217 WLEQHNSCPVCRYELP 232
WL H SCPVCR ELP
Sbjct: 116 WLGVHGSCPVCRRELP 131
>Os02g0191500 Similar to Goliath homolog precursor (RING finger protein 130)
Length = 375
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 160 PPPATQSSIDAMPTVKITQRHLSGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLE 219
P A+Q ++++P +++ S C VCKD F G +PCKH +H DCI PWL
Sbjct: 250 PSRASQLVVESLPEATLSEEEAS--RGCAVCKDSFASGQIVALLPCKHYFHGDCIWPWLT 307
Query: 220 QHNSCPVCRYEL 231
+CPVCR+++
Sbjct: 308 IRTTCPVCRHQV 319
>Os06g0633500 Zinc finger, RING-type domain containing protein
Length = 124
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 31/46 (67%)
Query: 187 CPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELP 232
C VCKD G A ++PC HLYH CI PWL NSCPVCRYELP
Sbjct: 50 CAVCKDGIAQGELATQLPCAHLYHGACIEPWLAIRNSCPVCRYELP 95
>Os01g0844700
Length = 235
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 144 GLDDLIEQLTQND-------RRGPPPATQSSI-DAMPTVKITQRHLSGDSHCPVCKDKFE 195
L++++E + + RR P A SS +PTV + C VC D E
Sbjct: 42 ALEEIVEVMDAGEFLQACALRRAPVAAAVSSTRQQLPTVTVRD----AGRTCAVCLDDLE 97
Query: 196 LGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYE 230
G A PC H YH CI PWLE H++CP+CR E
Sbjct: 98 PGGSAVVTPCDHAYHPQCIAPWLEAHDTCPLCRRE 132
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.141 0.469
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,198,612
Number of extensions: 447616
Number of successful extensions: 1592
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 1625
Number of HSP's successfully gapped: 28
Length of query: 283
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 183
Effective length of database: 11,814,401
Effective search space: 2162035383
Effective search space used: 2162035383
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 155 (64.3 bits)