BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0932000 Os01g0932000|J065030M14
(129 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0932000 Nucleic acid-binding, OB-fold domain containin... 265 6e-72
Os07g0113000 Protein of unknown function DUF889, eukaryote ... 251 1e-67
Os10g0377500 142 6e-35
Os06g0329200 Nucleic acid-binding, OB-fold domain containin... 140 2e-34
Os03g0429900 Nucleic acid-binding, OB-fold domain containin... 140 2e-34
Os01g0184300 Nucleic acid-binding, OB-fold domain containin... 140 4e-34
Os12g0539300 137 2e-33
Os12g0454300 Protein of unknown function DUF889, eukaryote ... 136 3e-33
Os10g0194001 136 5e-33
Os01g0390300 Nucleic acid-binding, OB-fold domain containin... 134 2e-32
Os12g0511700 130 4e-31
Os07g0418100 Protein of unknown function DUF889, eukaryote ... 129 8e-31
Os10g0107100 128 1e-30
Os04g0300175 Protein of unknown function DUF889, eukaryote ... 126 3e-30
Os07g0651500 Protein of unknown function DUF889, eukaryote ... 123 4e-29
Os08g0333300 123 4e-29
Os01g0244200 Triosephosphate isomerase family protein 119 4e-28
Os01g0223400 Nucleic acid-binding, OB-fold domain containin... 119 5e-28
Os10g0502700 116 4e-27
Os11g0243100 115 7e-27
Os11g0625600 115 8e-27
Os01g0556600 Protein of unknown function DUF889, eukaryote ... 115 8e-27
Os12g0159100 Nucleic acid-binding, OB-fold domain containin... 115 8e-27
Os09g0456900 Nucleic acid-binding, OB-fold domain containin... 114 2e-26
Os04g0362550 113 4e-26
Os10g0197600 Nucleic acid-binding, OB-fold domain containin... 102 5e-23
Os01g0383200 96 7e-21
Os02g0295300 89 8e-19
Os01g0838100 Nucleic acid-binding, OB-fold domain containin... 83 4e-17
Os03g0181900 75 1e-14
Os01g0175300 Nucleic acid-binding, OB-fold domain containin... 75 1e-14
Os01g0630700 Protein of unknown function DUF889, eukaryote ... 73 6e-14
Os07g0642100 Nucleic acid-binding, OB-fold domain containin... 70 4e-13
Os11g0475900 69 7e-13
Os03g0855700 Nucleic acid-binding, OB-fold domain containin... 69 8e-13
>Os01g0932000 Nucleic acid-binding, OB-fold domain containing protein
Length = 129
Score = 265 bits (677), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKVFKPLLTEGKVY 60
MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKVFKPLLTEGKVY
Sbjct: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKVFKPLLTEGKVY 60
Query: 61 YLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEVSNFVDK 120
YLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEVSNFVDK
Sbjct: 61 YLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEVSNFVDK 120
Query: 121 NESFVGKTS 129
NESFVGKTS
Sbjct: 121 NESFVGKTS 129
>Os07g0113000 Protein of unknown function DUF889, eukaryote family protein
Length = 1790
Score = 251 bits (640), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/139 (89%), Positives = 125/139 (89%), Gaps = 14/139 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEK------------ 48
MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEK
Sbjct: 1220 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKGGSIHAQIFPPL 1279
Query: 49 --VFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
VFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY
Sbjct: 1280 LQVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 1339
Query: 107 SLTPLNEVSNFVDKNESFV 125
+LTPLNEVSNFVDKNESFV
Sbjct: 1340 TLTPLNEVSNFVDKNESFV 1358
>Os10g0377500
Length = 1414
Score = 142 bits (358), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 86/129 (66%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKVFKPLLTEGKVY 60
MG+ I L GD N L R+S LWE+ D D T ++HI LVLVD+K FKPL+TEGKVY
Sbjct: 752 MGELQIASLELGDGNPTLRIRISWLWEYHDQNDETNLHHIGLVLVDQKKFKPLITEGKVY 811
Query: 61 YLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEVSNFVDK 120
L YRVK K Y PV N L +TFT W++VE+C+DVP NF YSLTP NE+ + VD+
Sbjct: 812 LLTYYRVKPCTKHYWPVDNKLAITFTWWSTVEECVDVPDNFAQYAYSLTPFNELRSLVDR 871
Query: 121 NESFVGKTS 129
+SF G S
Sbjct: 872 KDSFTGNVS 880
>Os06g0329200 Nucleic acid-binding, OB-fold domain containing protein
Length = 225
Score = 140 bits (354), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 95/137 (69%), Gaps = 14/137 (10%)
Query: 6 IDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDE--------------KVFK 51
I +L GD + ++ R+SRLW+F D D KIYH +LVL+DE FK
Sbjct: 69 ISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSLRNKFK 128
Query: 52 PLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPL 111
LL +GKVYY+DS+ V+ +N++YRPVANPLM++FTKWT++E+C+++P NFP++ +SLTP
Sbjct: 129 DLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITFSLTPF 188
Query: 112 NEVSNFVDKNESFVGKT 128
+V + V+KN +VG +
Sbjct: 189 QDVPSLVEKNHFYVGAS 205
>Os03g0429900 Nucleic acid-binding, OB-fold domain containing protein
Length = 187
Score = 140 bits (353), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 94/140 (67%), Gaps = 14/140 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDE------------- 47
M I +L GD N R+LARVSRLW FTD + TKI+H DLVL+DE
Sbjct: 1 MAHVLISQLSFGDSNKRILARVSRLWNFTDLNNHTKIFHTDLVLLDEMGTSIHAQIYPPI 60
Query: 48 -KVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
+ KPLL E KVYY+DS+ V+ +N++YRPVAN LM+ F+KWT++E+ ++VP +FP + +
Sbjct: 61 TEKMKPLLKEEKVYYIDSFTVRAANRTYRPVANNLMILFSKWTTLEEHINVPPHFPGITF 120
Query: 107 SLTPLNEVSNFVDKNESFVG 126
SLTP +V + V+KN +VG
Sbjct: 121 SLTPFEDVPSLVEKNSFYVG 140
>Os01g0184300 Nucleic acid-binding, OB-fold domain containing protein
Length = 168
Score = 140 bits (352), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 91/139 (65%), Gaps = 14/139 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKV----------- 49
M I +L GD N R+ ARVSRLW+F D D KI H DLVL+DE
Sbjct: 1 MAHILISQLSCGDSNIRIKARVSRLWDFHDLNDDRKIVHTDLVLLDETGNSIHAQMYQHV 60
Query: 50 ---FKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
KPLL EGKVYY+DS+ V+ +N++YRPVA+ LM+ FTKWT++E+C+DVP +FP + +
Sbjct: 61 IVNLKPLLQEGKVYYIDSFTVRYANRTYRPVAHSLMILFTKWTTLEECVDVPADFPAITF 120
Query: 107 SLTPLNEVSNFVDKNESFV 125
SLTP +V + VDKN +V
Sbjct: 121 SLTPFGDVPSLVDKNIFYV 139
>Os12g0539300
Length = 1822
Score = 137 bits (346), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 86/139 (61%), Gaps = 14/139 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKV----------- 49
MG+ I L GD+N RL R+SRLW+F D KD + +H DL+L+D K
Sbjct: 1380 MGEILISDLICGDENERLCVRLSRLWDFCDAKDESNFFHKDLLLLDAKGNSIHAHIFPPL 1439
Query: 50 ---FKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
+KPLLTEGKVYYL SY VK N+ YRPV N +M+ FT WT +E+C+ P FPT+VY
Sbjct: 1440 TEKYKPLLTEGKVYYLHSYTVKYGNRLYRPVPNEMMILFTTWTEIEECIGGPAGFPTIVY 1499
Query: 107 SLTPLNEVSNFVDKNESFV 125
SLT N+V N V + FV
Sbjct: 1500 SLTSYNDVPNLVGNVDRFV 1518
>Os12g0454300 Protein of unknown function DUF889, eukaryote family protein
Length = 1051
Score = 136 bits (343), Expect = 3e-33, Method: Composition-based stats.
Identities = 68/139 (48%), Positives = 90/139 (64%), Gaps = 14/139 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEK------------ 48
M I +L GD N R+ ARVSRLW+F D D KI H DLVL+DE
Sbjct: 536 MAHILISQLSCGDSNIRIKARVSRLWDFHDLNDDRKIVHTDLVLLDETGNSIHAQMYQHV 595
Query: 49 --VFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
KPLL EGKVYY+DS+ V+ +N++YRPVA+ M+ FTKWT++E+C+DVP +FP + +
Sbjct: 596 IVNLKPLLQEGKVYYIDSFTVRYANRTYRPVAHSQMILFTKWTTLEECVDVPADFPAITF 655
Query: 107 SLTPLNEVSNFVDKNESFV 125
SLTP +V + VDKN +V
Sbjct: 656 SLTPFGDVPSLVDKNIFYV 674
>Os10g0194001
Length = 495
Score = 136 bits (342), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 93/139 (66%), Gaps = 14/139 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDE------------- 47
M I +L GD N R+ ARVSRLW FTD D TKI+H DLVL+DE
Sbjct: 1 MAHVLISQLSFGDSNKRIHARVSRLWNFTDLNDDTKIFHTDLVLLDEIGTSIHAQIYPPI 60
Query: 48 -KVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
+ KPLL E KVYY+DS+ ++ +N++YRPVAN LM+ F+KWT++E+ ++VP +FP++ +
Sbjct: 61 TEKMKPLLKEEKVYYIDSFTIRAANRTYRPVANNLMILFSKWTTLEEHINVPPHFPSITF 120
Query: 107 SLTPLNEVSNFVDKNESFV 125
SLTP +V + V+KN +V
Sbjct: 121 SLTPFEDVPSLVEKNSFYV 139
>Os01g0390300 Nucleic acid-binding, OB-fold domain containing protein
Length = 185
Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 90/139 (64%), Gaps = 14/139 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEK-------VFKP- 52
M I L GD + R+ ARVSR W++ D D TKIYH DLVL+DEK ++ P
Sbjct: 1 MAYVLISDLMYGDTDKRIKARVSRQWDYHDLNDETKIYHTDLVLLDEKGNSIHVQIYPPA 60
Query: 53 ------LLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
LL EGKVYY DS+ V+ +N++YRPV NPLM++FTKWT++E+C+D +FP + +
Sbjct: 61 MIKLRTLLQEGKVYYFDSFSVRYANRTYRPVTNPLMISFTKWTTLEECIDAFDDFPAITF 120
Query: 107 SLTPLNEVSNFVDKNESFV 125
SLTP + + VD+N +V
Sbjct: 121 SLTPFQDAPSLVDRNAFYV 139
>Os12g0511700
Length = 1312
Score = 130 bits (326), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 85/143 (59%), Gaps = 14/143 (9%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKV----------- 49
MG+ I L D N L R+SRLWE+ D D T ++HI LVLVD+K
Sbjct: 610 MGELQIASLELSDGNPTLRIRISRLWEYHDQNDETNLHHIGLVLVDQKGSSIAAMIYPPC 669
Query: 50 ---FKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
FKPL+TEGKVY L YRVK K Y PV N L +TFT W++VE+C+DVP NF Y
Sbjct: 670 DKKFKPLITEGKVYLLTYYRVKPCTKHYWPVDNKLAITFTWWSTVEECVDVPDNFAQYAY 729
Query: 107 SLTPLNEVSNFVDKNESFVGKTS 129
SLTP NE+ + VD+ +SF S
Sbjct: 730 SLTPFNELRSLVDRKDSFTENVS 752
>Os07g0418100 Protein of unknown function DUF889, eukaryote family protein
Length = 2266
Score = 129 bits (323), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 14/138 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKV----------- 49
MG I L GD N L R+SRLWE+ D D + +++I LVLVD+K
Sbjct: 1435 MGGLQIASLEPGDGNPTLRIRISRLWEYRDQNDESILHYIGLVLVDQKGSSIAAMIYPPC 1494
Query: 50 ---FKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
FKPL+TEGKVY L YRVK K YRPV N L +TFT W++VE+C+DVP NF Y
Sbjct: 1495 DNKFKPLITEGKVYLLTYYRVKPCTKHYRPVDNKLAITFTWWSTVEECVDVPDNFAQYAY 1554
Query: 107 SLTPLNEVSNFVDKNESF 124
SL P NE+ + VD+ +SF
Sbjct: 1555 SLKPFNELRSHVDRKDSF 1572
>Os10g0107100
Length = 794
Score = 128 bits (321), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 87/128 (67%), Gaps = 14/128 (10%)
Query: 12 GDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDE--------------KVFKPLLTEG 57
GD N R+LARVSRLW FTD D TKI+H DLVL+DE + KPLL E
Sbjct: 407 GDSNKRILARVSRLWNFTDLNDDTKIFHTDLVLLDEMGTSIHAQIYPPITEKMKPLLKEE 466
Query: 58 KVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEVSNF 117
KVYY+DS+ V+ +N++YR VAN LM+ F+KWT++E+ ++VP +FP + +SLTP +V +
Sbjct: 467 KVYYIDSFTVRAANRTYRLVANNLMILFSKWTTLEEHINVPPHFPGITFSLTPFEDVPSL 526
Query: 118 VDKNESFV 125
V+K +V
Sbjct: 527 VEKKSFYV 534
>Os04g0300175 Protein of unknown function DUF889, eukaryote family protein
Length = 1718
Score = 126 bits (317), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 85/139 (61%), Gaps = 14/139 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDE------------- 47
MGD I +L G S R+SR+W+F D D TK+ H LVLVDE
Sbjct: 1401 MGDCLISQLELGGSKSCHCIRLSRMWKFCDASDETKLLHKALVLVDETGNSISAQIFPDI 1460
Query: 48 -KVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
++F+PLLTEGK+YYL YRVK NK YRPVAN ++ TKWT VE+ L+ P +FP+ VY
Sbjct: 1461 NEIFEPLLTEGKIYYLAYYRVKPRNKIYRPVANKFAISLTKWTKVEEYLEPPSSFPSYVY 1520
Query: 107 SLTPLNEVSNFVDKNESFV 125
+L NE + VDK +SF+
Sbjct: 1521 TLKSFNEFPSLVDKKDSFI 1539
>Os07g0651500 Protein of unknown function DUF889, eukaryote family protein
Length = 2021
Score = 123 bits (308), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 88/140 (62%), Gaps = 14/140 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDE------------- 47
M I +L GD N+R+LARVSRLW+F D + I+H DLVL+D+
Sbjct: 1624 MAHVLISQLSCGDLNTRILARVSRLWDFCDLNGSGNIFHTDLVLLDQMGNSIHAQIYPPA 1683
Query: 48 -KVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
+PLL E KVYY+DS+ V+ +N++YRPV N LM+ F+KWT+ E+ ++ +FP + +
Sbjct: 1684 IDSLRPLLKEQKVYYIDSFTVRYANRTYRPVDNSLMIVFSKWTTFEEYIEPAADFPGITF 1743
Query: 107 SLTPLNEVSNFVDKNESFVG 126
SLTP +++ N VDK +VG
Sbjct: 1744 SLTPFSDIPNLVDKTIFYVG 1763
>Os08g0333300
Length = 2183
Score = 123 bits (308), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 88/140 (62%), Gaps = 14/140 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDE------------- 47
M I +L GD N+R+LARVSRLW+F D + I+H DLVL+D+
Sbjct: 1587 MAHVLISQLSCGDLNTRILARVSRLWDFCDLNGSGNIFHTDLVLLDQMGNSIHAQIYPPA 1646
Query: 48 -KVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
+PLL E KVYY+DS+ V+ +N++YRPV N LM+ F+KWT+ E+ ++ +FP + +
Sbjct: 1647 IDSLRPLLKEQKVYYIDSFTVRYANRTYRPVDNSLMIVFSKWTTFEEYIEPAADFPGITF 1706
Query: 107 SLTPLNEVSNFVDKNESFVG 126
SLTP +++ N VDK +VG
Sbjct: 1707 SLTPFSDIPNLVDKTIFYVG 1726
>Os01g0244200 Triosephosphate isomerase family protein
Length = 2498
Score = 119 bits (299), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 83/143 (58%), Gaps = 14/143 (9%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEK------------ 48
M + + KL G DN R+ RVSRLWEF + D T++ H+ LVL+D++
Sbjct: 1663 MAYSMLSKLELGADNPRICVRVSRLWEFANPNDETQLLHLGLVLIDQEGTSIAAQIYPPC 1722
Query: 49 --VFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
F+ ++TEGKVYYL+ YRV+ ++ YRPV N L + FT+WT VEQ D +FP Y
Sbjct: 1723 DLQFREIITEGKVYYLEYYRVREWSRRYRPVNNSLSICFTRWTKVEQVADPAADFPLYTY 1782
Query: 107 SLTPLNEVSNFVDKNESFVGKTS 129
SLTP + VD+ E F G S
Sbjct: 1783 SLTPYGGLRQRVDRKEEFTGDIS 1805
>Os01g0223400 Nucleic acid-binding, OB-fold domain containing protein
Length = 249
Score = 119 bits (299), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 81/138 (58%), Gaps = 14/138 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEK------------ 48
MG T + L GDDN R+ RVSR W F D KD KI H LVL+DEK
Sbjct: 11 MGHTLLSDLSLGDDNERICVRVSRFWAFCDQKDDDKILHFGLVLIDEKGTSIAAQIYPPC 70
Query: 49 --VFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
+F+P++TEGKVYY+ +RV+ N+ Y+PV N + + FT+WT +E+ +D P P Y
Sbjct: 71 DEIFRPIITEGKVYYIKYFRVRKCNRQYKPVDNCMSIYFTRWTKLEERVDPPAEIPLYTY 130
Query: 107 SLTPLNEVSNFVDKNESF 124
SL+P + + V K +SF
Sbjct: 131 SLSPFGGLRSRVGKKDSF 148
>Os10g0502700
Length = 1169
Score = 116 bits (291), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 14/143 (9%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEK------------ 48
M + + KL DN R+ RVSRLWEF + D T++ H+ LVL+D++
Sbjct: 334 MAYSMLSKLELCADNPRICVRVSRLWEFANPNDETQLLHLGLVLIDQEGTSIAAQIYPPC 393
Query: 49 --VFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
F+ ++TEGKVYYL+ YRV+ ++ YRPV N L + FT+WT VEQ D +FP Y
Sbjct: 394 DLQFREIITEGKVYYLEYYRVREWSRRYRPVNNSLSICFTRWTKVEQVADPAADFPLYTY 453
Query: 107 SLTPLNEVSNFVDKNESFVGKTS 129
SLTP + VD+ E F G S
Sbjct: 454 SLTPYGGLRQRVDRKEEFTGDIS 476
>Os11g0243100
Length = 2171
Score = 115 bits (288), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 85/140 (60%), Gaps = 18/140 (12%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDE------------- 47
M I +L GD N+R+LARVSRLW+F D + I+H DLVL+D+
Sbjct: 1579 MAHVLISQLSCGDLNTRILARVSRLWDFCDLNGSGNIFHTDLVLLDQMGNSIHAQIYPPA 1638
Query: 48 -KVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
+PLL E KVYY+DS+ V+T YRPV N LM+ F+KWT+ E+ ++ +FP + +
Sbjct: 1639 IDSLRPLLKEQKVYYIDSFTVRT----YRPVDNSLMIVFSKWTTFEEYIEPAADFPGITF 1694
Query: 107 SLTPLNEVSNFVDKNESFVG 126
SLTP +++ N VDK +VG
Sbjct: 1695 SLTPFSDIPNLVDKTIFYVG 1714
>Os11g0625600
Length = 2171
Score = 115 bits (288), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 85/140 (60%), Gaps = 18/140 (12%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDE------------- 47
M I +L GD N+R+LARVSRLW+F D + I+H DLVL+D+
Sbjct: 1579 MAHVLISQLSCGDLNTRILARVSRLWDFCDLNGSGNIFHTDLVLLDQMGNSIHAQIYPPA 1638
Query: 48 -KVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
+PLL E KVYY+DS+ V+T YRPV N LM+ F+KWT+ E+ ++ +FP + +
Sbjct: 1639 IDSLRPLLKEQKVYYIDSFTVRT----YRPVDNSLMIVFSKWTTFEEYIEPAADFPGITF 1694
Query: 107 SLTPLNEVSNFVDKNESFVG 126
SLTP +++ N VDK +VG
Sbjct: 1695 SLTPFSDIPNLVDKTIFYVG 1714
>Os01g0556600 Protein of unknown function DUF889, eukaryote family protein
Length = 1932
Score = 115 bits (288), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 77/133 (57%), Gaps = 14/133 (10%)
Query: 6 IDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKV--------------FK 51
I L GD N LL RVSRLWE+ D D + HI LVLV EK FK
Sbjct: 1175 IPNLELGDGNPTLLVRVSRLWEYHDQDDEGDLRHIGLVLVGEKGYAIAAMIYPPWGKKFK 1234
Query: 52 PLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPL 111
PL++EGKVY L YRVK K YRPV N +M+ FT+WT +E+ +DV F Y+LTP
Sbjct: 1235 PLISEGKVYLLTYYRVKPCTKHYRPVDNKMMINFTRWTGIEEYVDVQAGFGHYAYTLTPY 1294
Query: 112 NEVSNFVDKNESF 124
E+ + VD+ +SF
Sbjct: 1295 QELRSRVDRKDSF 1307
>Os12g0159100 Nucleic acid-binding, OB-fold domain containing protein
Length = 191
Score = 115 bits (288), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 89/166 (53%), Gaps = 40/166 (24%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKV----------- 49
M + I L +GD N ++ RVSRLWE+ D D T +++I LVL+D+KV
Sbjct: 1 MAEVLIPDLEQGDGNPTIIVRVSRLWEYRDQNDETIVHNISLVLLDKKVPSRNSSANCYP 60
Query: 50 -----------------------------FKPLLTEGKVYYLDSYRVKTSNKSYRPVANP 80
F P++TEGKVY L YRV+ +++YRPV N
Sbjct: 61 YINVFSLSNSKSKQGASIAAYIYPPLDVVFGPIITEGKVYRLTFYRVRPCSRNYRPVNNR 120
Query: 81 LMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEVSNFVDKNESFVG 126
+ + FTKWT++E+ LDVP +FP YS TP NE+ + VD+ +SF G
Sbjct: 121 MSINFTKWTTLEEHLDVPADFPCYAYSPTPYNELRSHVDRKDSFTG 166
>Os09g0456900 Nucleic acid-binding, OB-fold domain containing protein
Length = 206
Score = 114 bits (284), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 79/138 (57%), Gaps = 14/138 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVD-------------- 46
M T I KL G N + RVSR WEF D D +YH+ LVLVD
Sbjct: 15 MVTTLISKLEPGLGNPTIRLRVSRFWEFRDQNDENILYHLGLVLVDGTGASIAAQIMPPL 74
Query: 47 EKVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
+++F P +TEGKVY L YRV+ YRPV N + TKW+++E+C DVP NFP VY
Sbjct: 75 DELFAPAITEGKVYDLTFYRVRQCTSQYRPVGNMQSIALTKWSTLEECTDVPENFPNYVY 134
Query: 107 SLTPLNEVSNFVDKNESF 124
SLTP +++ V++ +SF
Sbjct: 135 SLTPYDQLRGRVNRKDSF 152
>Os04g0362550
Length = 1410
Score = 113 bits (282), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 81/138 (58%), Gaps = 14/138 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDE------------- 47
M I KL G N R+ R+SR+W F D KD + H+ LVLVDE
Sbjct: 631 MDHCIISKLEPGLGNPRIYVRLSRMWNFNDPKDDISLLHVALVLVDETEGSIAAQIFPPD 690
Query: 48 -KVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
K+FKPLL+EGK+YYL Y V+ ++SY+PV+N L + FT WT VE+ ++ P +FP Y
Sbjct: 691 GKLFKPLLSEGKIYYLTHYIVRNCSRSYKPVSNSLAIAFTGWTIVEEYVNAPTSFPFYTY 750
Query: 107 SLTPLNEVSNFVDKNESF 124
SL N+++ +D +SF
Sbjct: 751 SLKSFNQLTALLDNKDSF 768
>Os10g0197600 Nucleic acid-binding, OB-fold domain containing protein
Length = 66
Score = 102 bits (255), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/49 (100%), Positives = 49/49 (100%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKV 49
MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKV
Sbjct: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKV 49
>Os01g0383200
Length = 1741
Score = 95.9 bits (237), Expect = 7e-21, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 59/76 (77%)
Query: 50 FKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLT 109
FK +L EGKVYY+DS+ VK +N++YRPV N LM+ FTKWT++E+C+DV ++P + +SLT
Sbjct: 1265 FKSVLHEGKVYYIDSFSVKYANRTYRPVTNLLMILFTKWTTLEECIDVLGDYPGITFSLT 1324
Query: 110 PLNEVSNFVDKNESFV 125
P ++ + +DKN ++
Sbjct: 1325 PFQDIPSLIDKNTFYI 1340
>Os02g0295300
Length = 2169
Score = 89.0 bits (219), Expect = 8e-19, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 14/125 (11%)
Query: 4 TSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVD--------------EKV 49
T I++L N + RVSR W F D D + ++H+ LVL+D +++
Sbjct: 995 TLINRLEPSLGNPTIRVRVSRFWAFRDQNDESNLHHLGLVLLDRTGASIAAQIFPPLDEL 1054
Query: 50 FKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLT 109
F+P +TEGKVY L YRV+ YRPV+N ++FTKW+++E+C DV +FP + +
Sbjct: 1055 FQPQITEGKVYDLTFYRVRQCTSQYRPVSNMQSISFTKWSTLEECNDVLEDFPNIKGNYE 1114
Query: 110 PLNEV 114
P+ +
Sbjct: 1115 PIKYI 1119
>Os01g0838100 Nucleic acid-binding, OB-fold domain containing protein
Length = 474
Score = 83.2 bits (204), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 17 RLLARVSRLWEFTDCKDATKIYHIDLVLVDEK--------------VFKPLLTEGKVYYL 62
++ A+++R+W++T D H+DLVL+DEK F+PLL E KVY
Sbjct: 56 KIRAKIARMWDYTGTADDLPPIHVDLVLIDEKGNAMYAEIPGVEADKFRPLLQESKVYTF 115
Query: 63 DSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEVSNFVDKNE 122
+ + S +Y+P N M+ T WT+VEQ +VP +FP+ V++L + +S V E
Sbjct: 116 SKFLILPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNLVQFSYLSLRVGMQE 175
Query: 123 SF 124
F
Sbjct: 176 YF 177
>Os03g0181900
Length = 552
Score = 75.1 bits (183), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEK------------ 48
M T I +L G + + R+SR+WEF + I H+DLVL+D+K
Sbjct: 30 MNITPIAELRPGRYDYMICVRISRIWEFRGTNEDDNIKHLDLVLLDQKGDAIYAEIPPDA 89
Query: 49 --VFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
+ L EG + Y+ V + SYR V NP M+ K T + + D P +FP +
Sbjct: 90 IPLLNQYLQEGNIVYISKITVNNAKPSYRAVGNPYMIKLNKRTCIIEAKDQPMDFPKYTF 149
Query: 107 SLTPLNEVSNFVDKNESFV 125
L +++ +F K + F+
Sbjct: 150 DLVSFDKLHDFTSKTDRFL 168
>Os01g0175300 Nucleic acid-binding, OB-fold domain containing protein
Length = 523
Score = 75.1 bits (183), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 1 MGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEK------------ 48
M T I +L G + + R+SR+WEF + I H+DLVL+D+K
Sbjct: 1 MNITPIAELRPGRYDYMICVRISRIWEFRGTNEDDNIKHLDLVLLDQKGDAIYAEIPPDA 60
Query: 49 --VFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVY 106
+ L EG + Y+ V + SYR V NP M+ K T + + D P +FP +
Sbjct: 61 IPLLNQYLQEGNIVYISKITVNNAKPSYRAVGNPYMIKLNKRTCIIEAKDQPMDFPKYTF 120
Query: 107 SLTPLNEVSNFVDKNESFV 125
L +++ +F K + F+
Sbjct: 121 DLVSFDKLHDFTSKTDRFL 139
>Os01g0630700 Protein of unknown function DUF889, eukaryote family protein
Length = 1671
Score = 72.8 bits (177), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 17 RLLARVSRLWEFTDCKDATKIYHIDLVLVDEKVFKPLLTEGKVYYLDSYRVKTSNKSYRP 76
R+ R +R EFT + KI +DLVL+DE+ FKPLL EG VYY+ + V + YRP
Sbjct: 1491 RVRVRATRFSEFTIANEPDKILRLDLVLLDEQ-FKPLLKEGAVYYIKYFEVAEARPQYRP 1549
Query: 77 VANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEV 114
V LM FT T+V + P FP+ + +E+
Sbjct: 1550 VDRLLMAKFTAHTTVIEDTRPPSTFPSYACKILSFDEL 1587
>Os07g0642100 Nucleic acid-binding, OB-fold domain containing protein
Length = 145
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 73 SYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEVSNFVDKNESFV 125
+YRPV NPLM++FTKWT++E+C+D +FP + +SLTP +V + VDKN +V
Sbjct: 1 TYRPVTNPLMISFTKWTTLEECIDASDDFPAITFSLTPFQDVPSLVDKNAFYV 53
>Os11g0475900
Length = 1429
Score = 69.3 bits (168), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 14/76 (18%)
Query: 6 IDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEK--------------VFK 51
I +L GD N+R+LARVSRLW+F+D D++ I+H ++VL+D+ V K
Sbjct: 909 ISQLACGDLNTRILARVSRLWDFSDLNDSSNIFHTNVVLLDQMGKSIHAQIYHPVIGVLK 968
Query: 52 PLLTEGKVYYLDSYRV 67
PLL E KVYY+DS+ V
Sbjct: 969 PLLQEQKVYYIDSFTV 984
>Os03g0855700 Nucleic acid-binding, OB-fold domain containing protein
Length = 599
Score = 69.3 bits (168), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 17 RLLARVSRLWEFTDCKDATKIYHIDLVLVDEK--------------VFKPLLTEGKVYYL 62
R+ R +R EFT + KI +DLVL+DE+ FKPLL EG VYY+
Sbjct: 71 RVRVRATRFSEFTTANEPDKILRLDLVLLDEQGDMMDAQIPGRRVVQFKPLLKEGAVYYI 130
Query: 63 DSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEV 114
+ V + YRPV LM FT T+V + P FP+ + +E+
Sbjct: 131 KYFEVAEARPQYRPVDRLLMAKFTAHTTVTEDTGPPSTFPSYACKILSFDEL 182
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,155,271
Number of extensions: 150409
Number of successful extensions: 346
Number of sequences better than 1.0e-10: 35
Number of HSP's gapped: 316
Number of HSP's successfully gapped: 35
Length of query: 129
Length of database: 17,035,801
Length adjustment: 89
Effective length of query: 40
Effective length of database: 12,388,755
Effective search space: 495550200
Effective search space used: 495550200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 150 (62.4 bits)