BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0201600 Os11g0201600|Os11g0201600
(386 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0201600 Cyclin-like F-box domain containing protein 773 0.0
Os11g0200300 Cyclin-like F-box domain containing protein 126 3e-29
Os11g0201500 109 4e-24
Os11g0208300 103 2e-22
Os11g0200600 Cyclin-like F-box domain containing protein 100 3e-21
Os11g0201332 Cyclin-like F-box domain containing protein 97 3e-20
AK069621 95 7e-20
AK062276 95 9e-20
Os11g0208000 Cyclin-like F-box domain containing protein 94 2e-19
Os11g0231600 Cyclin-like F-box domain containing protein 93 3e-19
Os11g0201900 91 1e-18
Os11g0209600 Cyclin-like F-box domain containing protein 91 2e-18
Os11g0201800 Cyclin-like F-box domain containing protein 89 5e-18
Os06g0556300 Cyclin-like F-box domain containing protein 89 6e-18
Os11g0201299 Conserved hypothetical protein 89 8e-18
Os11g0205900 Cyclin-like F-box domain containing protein 87 2e-17
Os11g0209500 Cyclin-like F-box domain containing protein 86 4e-17
Os11g0209100 Cyclin-like F-box domain containing protein 86 4e-17
Os11g0202200 Cyclin-like F-box domain containing protein 86 5e-17
Os11g0209200 Similar to Ribosomal RNA apurinic site specifi... 84 2e-16
Os11g0208100 Cyclin-like F-box domain containing protein 80 2e-15
Os06g0493300 80 2e-15
Os10g0127000 Conserved hypothetical protein 78 1e-14
Os11g0208400 Cyclin-like F-box domain containing protein 76 4e-14
Os11g0202000 Cyclin-like F-box domain containing protein 76 4e-14
Os11g0262500 75 7e-14
Os11g0202300 Conserved hypothetical protein 74 2e-13
Os10g0128200 Cyclin-like F-box domain containing protein 73 3e-13
Os10g0127900 Conserved hypothetical protein 73 4e-13
>Os11g0201600 Cyclin-like F-box domain containing protein
Length = 386
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/386 (97%), Positives = 377/386 (97%)
Query: 1 MAPTRGGSKRACVGSGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTR 60
MAPTRGGSKRACVGSGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTR
Sbjct: 1 MAPTRGGSKRACVGSGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTR 60
Query: 61 RLSIAGLSRSPHLLXXXXXXXXXPATVDKLSKFVNHLLLSRKQGPLDECRFSFDGFKDMD 120
RLSIAGLSRSPHLL PATVDKLSKFVNHLLLSRKQGPLDECRFSFDGFKDMD
Sbjct: 61 RLSIAGLSRSPHLLSTTGSGGSSPATVDKLSKFVNHLLLSRKQGPLDECRFSFDGFKDMD 120
Query: 121 GAQVDMWIRYVLDNVWQLRVLLINLGTSIHVKLAGTPLVSENLDNYDALCGLCANCRDND 180
GAQVDMWIRYVLDNVWQLRVLLINLGTSIHVKLAGTPLVSENLDNYDALCGLCANCRDND
Sbjct: 121 GAQVDMWIRYVLDNVWQLRVLLINLGTSIHVKLAGTPLVSENLDNYDALCGLCANCRDND 180
Query: 181 NISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSDYNLDGGFHALL 240
NISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSDYNLDGGFHALL
Sbjct: 181 NISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSDYNLDGGFHALL 240
Query: 241 CFLQQTPVVQKLTLKLRKIHGPTVDISSYLKRPVVLRHLRIVEVKCPVSVQEEIFKLWKI 300
CFLQQTPVVQKLTLKLRKIHGPTVDISSYLKRPVVLRHLRIVEVKCPVSVQEEIFKLWKI
Sbjct: 241 CFLQQTPVVQKLTLKLRKIHGPTVDISSYLKRPVVLRHLRIVEVKCPVSVQEEIFKLWKI 300
Query: 301 LITWGRYIVQFNIESTHYRLDWTIKMPKLSGRLAKQHRSMAKEARSTTPVFMCCYAHIDC 360
LITWGRYIVQFNIESTHYRLDWTIKMPKLSGRLAKQHRSMAKEARSTTPVFMCCYAHIDC
Sbjct: 301 LITWGRYIVQFNIESTHYRLDWTIKMPKLSGRLAKQHRSMAKEARSTTPVFMCCYAHIDC 360
Query: 361 SGQASGVQRLRLSVRGETSDKNVLVE 386
SGQASGVQRLRLSVRGETSDKNVLVE
Sbjct: 361 SGQASGVQRLRLSVRGETSDKNVLVE 386
>Os11g0200300 Cyclin-like F-box domain containing protein
Length = 410
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 172/395 (43%), Gaps = 119/395 (30%)
Query: 15 SGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRRLSIAGLSRSPHLL 74
G D +S LPDE++H VL FLP HEAV T LLSRRWR LW+S L I
Sbjct: 18 ENSGEDWLSTLPDEILHNVLSFLPAHEAVWTCLLSRRWRNLWRSAPVLRI---------- 67
Query: 75 XXXXXXXXXPATVDKLSKFVNHLLLSRKQGPLDECRF-SFDGFKDM-------DGAQVDM 126
V++ +KFVN+LLL R PLDE F ++ + M + ++
Sbjct: 68 ------RHRWVGVERFNKFVNNLLLLRDPVPLDELEFQTYTYWPTMMPRPCIYEVKYAEL 121
Query: 127 WIRYVLDNVWQLRVLLINLGTSIHVKLA-GTPLVSENL---------------------- 163
WIR+ L + + RVL + + + L PL+S++L
Sbjct: 122 WIRHAL--MCKARVLRVLVQSEHLAPLELSMPLISKHLTTLQLRSVKLDNHALDFSNCPV 179
Query: 164 ----------------DNYDALCGL-------------------CANCRDNDNISGTCL- 187
DNY ++ L C CR + GTC+
Sbjct: 180 LEDLQMNCCLISLRLGDNYGSIPLLESMPLLVTASVKFGTLSWGCRKCRYD---PGTCVC 236
Query: 188 --------------LLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSDYNLD 233
RGLS LEL M +DL WCPTFS L+TL+L + +
Sbjct: 237 CDGDPDGDGSVKYKFFRGLSNAANLELVAEAGM----QDLTWCPTFSKLKTLLLDGWVVG 292
Query: 234 GGFHALLCFLQQTPVVQKLTLKLRKIHGPTVDI---SSYLKRPVVLRHLRIVEVKCPVSV 290
F AL CFLQQT +++KLTL+L K H V+I SS + + V ++L V+V+C +
Sbjct: 293 HNFCALGCFLQQTSILEKLTLQLYKGHEDMVEIEESSSSIGQLVQFQNLERVKVRC-LRN 351
Query: 291 QEEIFKLWKIL---------ITWGRYIVQFNIEST 316
+E + K++KIL IT YI N++
Sbjct: 352 EEWVHKVFKILNACGVSPDKITIQHYIYIINMKQA 386
>Os11g0201500
Length = 412
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 158/346 (45%), Gaps = 70/346 (20%)
Query: 20 DRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRRLSIAGLSRSPHLLXXXXX 79
D I LPD ++HR+L LP HEAV+T +L+RRWR LW+S L I + P
Sbjct: 68 DLIGALPDAMLHRILSLLPAHEAVRTCVLARRWRHLWRSAPGLRIVRAAGRP-------- 119
Query: 80 XXXXPATVDKLSKFVNHLLLSRKQGPLDECRFSFDGFKDMDGAQVDMWIRYVLDNVWQLR 139
PATV++ FV+HLLL R PL+ C SFD + +V++WIR+++ + ++R
Sbjct: 120 ----PATVEEPQGFVDHLLLLRGGSPLNTCELSFDQIRRQHIPRVNLWIRHIV--MCKVR 173
Query: 140 VLLINLGTSIHVKLAGTPLVSENLDNYDALCGLCANCRDNDNISGTCLLLRGLS--RCTY 197
VL+++L H +L PLVS++L + L GL N D+ +CL L L +C +
Sbjct: 174 VLVLHLNPYCH-ELDELPLVSQHLTRLE-LSGLILN--DSFLNFSSCLALDYLEIVQCYF 229
Query: 198 LELSP-----------------------SYQMLTFERD-LRWCPTFSNLRTLVLSDYNLD 233
L+ + +++ D + P L +LV +D L+
Sbjct: 230 SSLTKITSQSLKRLRIIKCYTGSRPHVHATNLVSLHLDAITRTPVLERLPSLVKADIKLN 289
Query: 234 G---GFHALLCFLQ---QTPVVQKLTLKLRKI---HGPTVDISSYLKR------PVVLRH 278
F + + FL + KLR GP + R +L++
Sbjct: 290 SQCRDFCSFMTFLGVAIMNSAAVVVAYKLRTACFCEGPKHKVEMKGSRHPSGVSAAMLKY 349
Query: 279 LRIVEVKCPVSVQEEIFKLWKIL-------ITWGR---YIVQFNIE 314
L IVEVKC V V E + + K L IT G YI++F +
Sbjct: 350 LEIVEVKCEV-VDESVLDVLKFLSSLNICKITTGTHAFYIIRFAFK 394
>Os11g0208300
Length = 439
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 92/156 (58%), Gaps = 14/156 (8%)
Query: 173 CANCRDN----DNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLS 228
C C D +G CL +GLS T+LELS + F RDL+WCPTF+ L+TL+L
Sbjct: 273 CFGCADEVVAGYGTNGMCL--QGLSEATHLELSADPAVYVFRRDLKWCPTFAKLKTLLLD 330
Query: 229 DYNLDGGFHALLCFLQQTPVVQKLTLKLRKIHGPTVDISS-----YLKRPVVLRHLRIVE 283
++ + G AL+CFLQ +P+++KLT++L+K PT + S + P V HL+IVE
Sbjct: 331 EWCVVGDLSALICFLQHSPILEKLTIQLQK--APTCLMDSEGQYNTSELPFVSNHLKIVE 388
Query: 284 VKCPVSVQEEIFKLWKILITWGRYIVQFNIESTHYR 319
++C V ++K+ K L T+G + Q NI+ T R
Sbjct: 389 IECK-EVNTWVWKILKTLTTYGIPLKQINIKQTSER 423
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 122/303 (40%), Gaps = 66/303 (21%)
Query: 1 MAPTRGGSKRACVGSGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTR 60
+A RG K+ V DRIS LPDEV+H VL LP H+AV T +L+RRW LWK
Sbjct: 12 VAAARGRKKKERVAP----DRISALPDEVLHLVLSLLPVHDAVATCVLARRWLHLWKEAP 67
Query: 61 RLSIAGLSRSPHLLXXXXXXXXXPATVDKLSKFVNHLL-LSRKQGPLDECRFSFDGFKDM 119
LS+ P D+ V+ L PL+ C + + F +
Sbjct: 68 GLSVEWWDYD------------EPG--DRFISLVDRFFTLRSSSAPLNYCSININ-FPEF 112
Query: 120 DGAQVDMWIRYVLDNV-WQLRVLLINLGTSIHVKLAGTPLVSENL-----------DNYD 167
+ +++R++ + Q RVL I+L V+L L+S++L DN+
Sbjct: 113 LPEKEQLFVRWIQRALRCQARVLRISLID--WVELPNMTLISQHLTRLELQGISGDDNFL 170
Query: 168 ALCGLCANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVL 227
L G C + N N+ C+ + LS S+L+TL L
Sbjct: 171 DLSG-CPSLV-NLNMDTCCIYVDKLSS-------------------------SSLKTLCL 203
Query: 228 SDYNLDGGFHALLCFLQQTPVVQKLTLKLRKIHGPTVDISSYLKRPVVLRHLRIVEVKCP 287
S +H LCF P + L L P ++ L + +V R E KC
Sbjct: 204 SQCQFSIEYHIWLCF----PSLVSLELSYCPGRAPFLESMPSLLQAIV-RFDEACEDKCQ 258
Query: 288 VSV 290
SV
Sbjct: 259 KSV 261
>Os11g0200600 Cyclin-like F-box domain containing protein
Length = 460
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Query: 171 GLCANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSDY 230
G CA+C + + S C LR LS LEL+ M F++DL WCP FS ++TL+L +
Sbjct: 310 GTCADCDGDPDSSFKCEFLRDLSNAVNLELAAEDGMCMFKQDLTWCPRFSKVKTLLLDGW 369
Query: 231 NLDGGFHALLCFLQQTPVVQKLTLKLRKIHGPTVDI---SSYLKRPVVLRHLRIVEVKCP 287
+ F+A++CFLQ TP+++KLTL+L + H V+I S + R V HL+ VEV+C
Sbjct: 370 VVGHDFYAVVCFLQHTPILEKLTLQLCEGHERMVEIEESSRSVGRMVQFEHLQTVEVRC- 428
Query: 288 VSVQEEIFKLWKILITWG 305
+ E + K+ KIL T+G
Sbjct: 429 LRNDEWVHKILKILNTYG 446
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 1 MAPTRGGSKR---ACVGSGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWK 57
MA R GS R GG D +S LPDE++H VL FLP HEAV T +LSRRWR LW+
Sbjct: 1 MATRRDGSSRREGLTAEEDGGEDWLSTLPDEILHNVLSFLPAHEAVWTCVLSRRWRNLWR 60
Query: 58 STRRLSIAGLSRSPHLLXXXXXXXXXPATVDKLSKFVNHLLLSRKQGPLDECRF-SFDGF 116
S L I R + K KF N+LLL R PLDE F + G
Sbjct: 61 SAPVLRIRNAKRW--------------GGMAKFDKFFNNLLLLRDPVPLDELEFQTVLGI 106
Query: 117 KDMDGAQ--------VDMWIRYVLD-NVWQLRVLLINLGTSIHVKLAGTPLVSENLDNYD 167
+ Q + WIR+ L NV LRV L+ + + PL+SE+L +
Sbjct: 107 CKLHPLQPSFRLLKYANTWIRHALMCNVRVLRV-LVQYQYDLPLLKVNMPLISEHLKTLE 165
>Os11g0201332 Cyclin-like F-box domain containing protein
Length = 425
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 84/136 (61%), Gaps = 4/136 (2%)
Query: 173 CANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSDYNL 232
C +C D+ S C+LL+GL+ T LEL ++ +RDLRWCPTF+NL+TL+LS +
Sbjct: 252 CTHCYGIDDGSAGCVLLKGLADATNLELIADPEVFILKRDLRWCPTFTNLKTLLLSQWFE 311
Query: 233 DGGFHALLCFLQQTPVVQKLTLKLRK---IHGPTVDISSYLKRPVVLRHLRIVEVKCPVS 289
AL+C LQ +PV++KLTL+L K I+ + I + +++ +L+ VEVKC
Sbjct: 312 SSDHCALICILQHSPVLEKLTLQLSKKSVINVRSRAIYNSMEKSFTSENLKTVEVKCQ-D 370
Query: 290 VQEEIFKLWKILITWG 305
+ + + KL K L ++G
Sbjct: 371 IDQRVHKLMKSLNSYG 386
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 84/155 (54%), Gaps = 27/155 (17%)
Query: 8 SKRACVGSGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTR--RLSIA 65
SK+A V GGG DRIS LP ++ VL FL E V+T +L+RRWR LWKS R++ A
Sbjct: 5 SKKALV-EGGGDDRISFLPTALLQHVLSFLQAKEVVRTCVLARRWRHLWKSMPILRVTGA 63
Query: 66 GLSRSPHLLXXXXXXXXXPATVDKLSKFVNHLLLSRKQGPLDECRFSFDGFKDMDGAQVD 125
G +R+ H F HLLL R + PL+ C F F+ F D V+
Sbjct: 64 GDARAFH-------------------TFTYHLLLXRDRSPLESCTFDFNVFSKDDMPIVN 104
Query: 126 MWIRYVLDNVWQLRVLLINLGTSIHVKLAGTPLVS 160
+WIRYVL + Q+RVL + +G +L P+VS
Sbjct: 105 LWIRYVL--LCQVRVLTLAIGGH---QLTDLPVVS 134
>AK069621
Length = 508
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 67/117 (57%), Gaps = 12/117 (10%)
Query: 17 GGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRRLSIAGLSRSPHLLXX 76
GGGDR+ LPDE + VL FLP EAV+T L+RRWR LWKS L I G R
Sbjct: 8 GGGDRLGALPDEALQHVLPFLPLPEAVRTGALARRWRHLWKSMPVLRITGEGR------- 60
Query: 77 XXXXXXXPATVDKLSKFVNHLLLSR-KQGPLDECRFSFDGFKDMDGAQVDMWIRYVL 132
+ V +L++FVNHLLL R + LD C + F+ D Q+++WIR+VL
Sbjct: 61 ----VLNRSGVRRLNRFVNHLLLLRDRSARLDACEINLGTFRSQDDPQINLWIRHVL 113
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 173 CANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSDYNL 232
C NC N SG C+LL GLS LEL ++ F DL WCPTF L+TL+L+++++
Sbjct: 258 CDNCGANGGSSGDCVLLDGLSEAKSLELIAKPRVFIFRSDLMWCPTFGKLKTLLLNEWSV 317
Query: 233 DGGFHALLCFLQQTPVVQKLTLKLRKIHGPT---VDISSY--LKRPVVLRHLRIVEVKCP 287
L+CFLQ TPV++KLTL+L GP + SY + P + L++VEVK
Sbjct: 318 AIDLVELICFLQHTPVLEKLTLQL--CEGPVNWMENEGSYDPTENPFASKQLKVVEVKFE 375
Query: 288 VSVQEEIFKLWKILITWGRYIVQFNIEST 316
+ K+ I T+G I Q I+ +
Sbjct: 376 -KFDLRVHKIIMIFSTYGVNIEQIYIQRS 403
>AK062276
Length = 412
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 91/156 (58%), Gaps = 16/156 (10%)
Query: 20 DRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRRLSIAGLSRSPHLLXXXXX 79
D I LPD ++HR+L LP EAV+T +L+RRWR LW+S L + + P
Sbjct: 17 DLIGALPDAMLHRILSLLPAQEAVRTCVLARRWRHLWRSAPGLRVVRAAGRP-------- 68
Query: 80 XXXXPATVDKLSKFVNHLLLSRKQGPLDECRFSFDGFKDMDGAQVDMWIRYVLDNVWQLR 139
PATV++L FV+HLLL R LD C SFD + D +V++WIR+++ + ++R
Sbjct: 69 ----PATVEELQGFVDHLLLLRGGSSLDTCELSFDQIRRQDIPRVNLWIRHMV--MCKVR 122
Query: 140 VLLINLGTSIHVKLAGTPLVSENLDNYDALCGLCAN 175
VL+++L H +L PLVS++L + L GL N
Sbjct: 123 VLVLHLNPYCH-ELDELPLVSQHLTRLE-LSGLILN 156
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 13/149 (8%)
Query: 162 NLDNYDALCG--LCANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTF 219
+ D++ C C CR + C+LLRGLS L L +M F RDL+WCP F
Sbjct: 246 SFDDFSGGCNHEFCGGCRGVQ--AENCVLLRGLSEAKNLALVAETKMFVFRRDLKWCPIF 303
Query: 220 SNLRTLVLSD-YNLDGGFHALLCFLQQTPVVQKLTLKLRKIHGPTVDISSYLKR------ 272
NL+TL+L++ + + AL C LQ +PV++KLTL+L + GP + R
Sbjct: 304 RNLKTLLLNECWCVLSDLSALACILQHSPVLEKLTLQLFSM-GPKHKVKMKGSRHPSGVS 362
Query: 273 PVVLRHLRIVEVKCPVSVQEEIFKLWKIL 301
+L++L IVEVKC V V E + + K L
Sbjct: 363 AAMLKYLEIVEVKCEV-VDESVLDVLKFL 390
>Os11g0208000 Cyclin-like F-box domain containing protein
Length = 425
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 118/235 (50%), Gaps = 27/235 (11%)
Query: 16 GGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRRLSIAGLSRSPHLLX 75
G DRISDLPD+VIH VL LP+ +AV+T L+RRWR+LW+S + +AG
Sbjct: 2 ASGADRISDLPDDVIHHVLSLLPSRDAVRTCALARRWRDLWRSVPAVRVAG--------- 52
Query: 76 XXXXXXXXPATVDKLSKFVNHLLLSRKQG-PLDECRFS--FDGFKDMDGAQVDMWIRYVL 132
A+ D L++FV+ LL R+ G LD C F FDG + Q D WIR L
Sbjct: 53 -----DRGWASFDALARFVDSLLRLRRGGAALDACDFDLRFDGAFPGEELQGDTWIRRAL 107
Query: 133 DNVWQLRVLLINLGTS--IHVKLAGTPLVSENLDNYDALCGLCANCRDNDNISGTCLLLR 190
Q+R L + T + + L+ +PLVS +L + L G+ N + D S L+
Sbjct: 108 RR--QVRALRFAVSTHPRVPIPLSDSPLVSHSLTTLE-LRGVQGNDQVLDFSSCPSLVDL 164
Query: 191 GLSRCTY--LEL-SPSYQMLTFERDLRWCP--TFSNLRTLVLSDYNLDGGFHALL 240
+ C LE+ SPS + L+ + +C T + +LV +N + G LL
Sbjct: 165 KMKDCYVGGLEMWSPSLKHLSITYCVFYCDYRTRMDFPSLVTFKFNTNTGRTPLL 219
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 24/196 (12%)
Query: 164 DNYDALCGLCANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLR 223
D DA C C + D C+ L GL+ T L L ++ F RDL+WC TFS L+
Sbjct: 247 DCGDAGCKGCHDYYRPDEYD--CVFLEGLTEATDLTLLAYSKVYLFNRDLKWCSTFSKLK 304
Query: 224 TLVLSDYNLDGGFHALLCFLQQTPVVQKLTLKLRKIHGPTVDIS---SYLKRPVVLRHLR 280
TL L+ + + AL FLQ P++++L L++ K+ V + + L++P HL+
Sbjct: 305 TLFLNAWFVAPDLSALAWFLQHAPLLERLFLRVSKVPKNLVGMDGSFNQLEQPFAASHLQ 364
Query: 281 IVEVKCPVSVQEEIFKLWKILITWGRYIVQFNIESTHYRLDWTIKMPKLSGRLAKQHRSM 340
IVE+ C V I K+ K+L G + + K+S R + SM
Sbjct: 365 IVEIYCR-EVDGIILKILKVLNANG------------------VPLEKISIRCSGCELSM 405
Query: 341 AKEARSTTPVFMCCYA 356
A V MCC A
Sbjct: 406 NTHASYYAVVNMCCRA 421
>Os11g0231600 Cyclin-like F-box domain containing protein
Length = 433
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 94/184 (51%), Gaps = 18/184 (9%)
Query: 153 LAGTPLVSENLDNYDALC-GLCAN----------CRDNDNI---SGTCLLLRGLSRCTYL 198
L G PL+ N D C CAN C D D + C+LL+GLS T L
Sbjct: 234 LEGMPLLVTASVNLDHECRDRCANTEFGDCGDPECDDCDVMVSDGNGCVLLQGLSGATTL 293
Query: 199 ELSPSYQMLTFERDLRWCPTFSNLRTLVLSDYNLDGGFHALLCFLQQTPVVQKLTLKLRK 258
EL+ ++ F RDL WCP FS L+TL+++++ + L C L+ +P+V+KLTL+L K
Sbjct: 294 ELTTESRVFMFRRDLMWCPIFSKLKTLLVNEWFMTSNMSGLACLLEHSPIVEKLTLQLSK 353
Query: 259 IHGPTVDISSY---LKRPVVLRHLRIVEVKCPVSVQEEIFKLWKILITWGRYIVQFNIES 315
V+I K+ + ++L IVE+KC E + K+ KIL G + + N+
Sbjct: 354 EPRNFVEIEDSDKPCKQAFLFKNLNIVEIKCQEG-DERVKKILKILSQNGIPLAKINVLQ 412
Query: 316 THYR 319
T R
Sbjct: 413 TKRR 416
>Os11g0201900
Length = 420
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 86/174 (49%), Gaps = 26/174 (14%)
Query: 1 MAPTRGGSKRACVGSGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTR 60
M P + G + + GGG DR+ LPDEV+H +L FLP +AV+T +L+ RWR+LWKS
Sbjct: 1 MPPAKRGRRMMDLDGGGGEDRVGALPDEVLHHMLSFLPARDAVQTCVLAHRWRDLWKSAT 60
Query: 61 RLSIAGLSRSPHLLXXXXXXXXXPATVDKLSKFVNHLLLSRKQGPLDECRFSF------- 113
L I A V ++ FV+HLLL R PLD C F
Sbjct: 61 GLRIGSDEED-------------TARVREIRVFVDHLLLLRGCAPLDMCELKFWFDSDED 107
Query: 114 ----DGFKDMDGAQVDMWIRYVLDNVWQLRVLLINLGTSIHVKLAGTPLVSENL 163
D D +V++WIR + + ++R L++N S +L PLVS +L
Sbjct: 108 DDEEDEESKNDARRVNLWIRSAVAS--KVRNLVLNNICSGSFELDDLPLVSRHL 159
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 77/139 (55%), Gaps = 13/139 (9%)
Query: 170 CGLCANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSD 229
C C DN N C+LL GLS L L+ + F+RDL+WCPTFS L+TL+L+D
Sbjct: 278 CKYCYPIDDNRN----CVLLNGLSEAKNLALTAECKTFIFKRDLQWCPTFSKLKTLLLND 333
Query: 230 Y-NLDGGFHALLCFLQQTPVVQKLTLKLRKIHGPTVDIS-----SYLKRPV-VLRHLRIV 282
+ + FHAL C L+ +PV++KLTL L GP + + RP + L IV
Sbjct: 334 HWCVAPDFHALSCILKHSPVLEKLTLHLFS-KGPEHKVELNGSFGLMDRPTGISERLNIV 392
Query: 283 EVKCPVSVQEEIFKLWKIL 301
EVKC V V E + K+ K L
Sbjct: 393 EVKCKV-VDENVSKVLKFL 410
>Os11g0209600 Cyclin-like F-box domain containing protein
Length = 330
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 18 GGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRRLSIAGLSRSPHLLXXX 77
GGDRI LPD V+ +L FLP HEAV+T +L+RRWR LWKS L I
Sbjct: 90 GGDRIGGLPDGVLQHILGFLPPHEAVRTCVLARRWRHLWKSVAALRITNWD--------- 140
Query: 78 XXXXXXPATVDKLSKFVNHLLLSRKQGPLDECRFSFDGFKDMDGAQVDMWIRYVLDNVWQ 137
+++ FV+HLLL R + P+DE D D +V+ W R+ + + Q
Sbjct: 141 ---WRKVVPMEEFRYFVHHLLLRRGRAPIDEFELDLAELSDRDTLRVNRWFRHAV--MCQ 195
Query: 138 LRVLLINLGTS--IHVKLAGTPLVSENLDNYD 167
RVL +++ S ++L P+VS +L D
Sbjct: 196 ARVLRLDIRVSRGSELELENLPVVSRHLQKLD 227
>Os11g0201800 Cyclin-like F-box domain containing protein
Length = 442
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 10/159 (6%)
Query: 8 SKRACVGSGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRRLSIAGL 67
+KR+ GG DRI LPDE++H +L FLP +AV+T +L+ RWR LWKS L I G
Sbjct: 31 AKRSKKDQAGGEDRIGALPDEILHHMLSFLPARDAVQTCVLAGRWRHLWKSATGLRIGGE 90
Query: 68 SRSPHLLXXXXXXXXXPATVDKLSKFVNHLLLSRKQGPLDEC--RFSFDGFKDMDGA-QV 124
S V + +FV+HLLL R PLD C RF D + D D +V
Sbjct: 91 SED-----WVWWRVEEKPRVRDIREFVDHLLLLRGCEPLDMCELRFWSDYYDDDDETRRV 145
Query: 125 DMWIRYVLDNVWQLRVLLINLGTSIHVKLAGTPLVSENL 163
++WIR+ + + Q+R L++ +L PLVS +L
Sbjct: 146 NLWIRHAVAS--QVRHLVVRSIAGGVFELDDLPLVSRHL 182
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 132 LDNVWQLRVLLINLGTSIHVKLAGTPLVSENLDNY-DALCGL--CANCRD-NDNISGTCL 187
LD+ W + LL ++ + + + S+ N CG C C ND+ S C+
Sbjct: 257 LDDYWCMTPLLESMPSLVEATITVNSGCSDFCRNAGSGYCGFEDCNYCYPINDDRS--CV 314
Query: 188 LLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSD-YNLDGGFHALLCFLQQT 246
LL+GLS L L + F RDL+W PTFS L+TL+L+D + + FHAL C L+ +
Sbjct: 315 LLKGLSEAKNLALVAHCRTFIFNRDLKWYPTFSKLKTLLLNDHWCVAPEFHALSCILKHS 374
Query: 247 PVVQKLTLKLRKIHGPTVDIS-----SYLKRPV-VLRHLRIVEVKCPVSVQEEIFKLWKI 300
PV++KLTL L GP + + RP + HL IVEVKC V E + K+ K
Sbjct: 375 PVLEKLTLHLFSW-GPGHKVEMNGSFGMMDRPAEIPEHLNIVEVKCE-EVNENVSKVLKF 432
Query: 301 LITWG 305
L +
Sbjct: 433 LCAFN 437
>Os06g0556300 Cyclin-like F-box domain containing protein
Length = 423
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 82/166 (49%), Gaps = 27/166 (16%)
Query: 5 RGGSKRACVGS--GGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRRL 62
R K A V + GGG DRIS LPDEV+ R L FLP+ + V+T +LSRRWR WKS L
Sbjct: 4 RKKCKAAAVATTDGGGEDRISALPDEVLQRALSFLPSRDVVRTCVLSRRWRHQWKSVPAL 63
Query: 63 SIAGLSRSPHLLXXXXXXXXXPATVDKLSKFVNHLLLSRKQGPLDECRFSFDGFKDMDGA 122
I V LS FV + LL R + L EC + F + DG
Sbjct: 64 RIYAFDDC--------------RDVQHLSDFVTNFLLRRNRLALHECDIT--CFDEGDGC 107
Query: 123 QV-----DMWIRYVLDNVWQLRVLLINLGTSIHVKLAGTPLVSENL 163
+V WIRY + Q+RVL +++ H +L G PL ++ L
Sbjct: 108 EVFGENARQWIRYAVS--CQVRVLRVSV--EAHTRLFGAPLKAQRL 149
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Query: 187 LLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSDYNLDGGFHALLCFLQQT 246
+LL GLS LEL + F RD R CPTF+ L+TL+L+++ + AL+ FLQ +
Sbjct: 278 VLLNGLSDAIQLELISGAGVFIFRRDFRCCPTFNKLKTLLLNEWCMAADSSALIYFLQHS 337
Query: 247 PVVQKLTLKLRKIHGPTVDISSYLK----RPVVLRHLRIVEVK 285
PV++KLTL+LRK V S K + +V +HL++VE+K
Sbjct: 338 PVLEKLTLQLRKSQRTMVKRGSTNKNQNEKFLVSKHLKLVEIK 380
>Os11g0201299 Conserved hypothetical protein
Length = 190
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 95/171 (55%), Gaps = 9/171 (5%)
Query: 173 CANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSDYNL 232
C +C D+ S C+LL+GL+ + LEL ++ RDLRWCPTF+ L+TL+L +
Sbjct: 13 CTHCYGIDDGSAGCVLLKGLADASNLELIADPKVFILRRDLRWCPTFTKLKTLLLIQWFE 72
Query: 233 DGGFHALLCFLQQTPVVQKLTLKLRK---IHGPTVDISSYLKRPVVLRHLRIVEVKCPVS 289
AL+C LQ +P ++KLTL+L K I+ + I + + + +L+ VEVKC
Sbjct: 73 SAENCALICILQHSPFLEKLTLQLSKKPDINMRSRAIYNSMGKSFASDNLKTVEVKCQ-D 131
Query: 290 VQEEIFKLWKILITWGRYIVQFNIESTH-----YRLDWTIKMPKLSGRLAK 335
+ +++ KL L ++G + NI+ T+ + WT +P+ S + ++
Sbjct: 132 IDKKVHKLIMSLNSYGIPPEKINIQQTNESYECFNFVWTGFIPRQSYQASE 182
>Os11g0205900 Cyclin-like F-box domain containing protein
Length = 485
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 88/168 (52%), Gaps = 24/168 (14%)
Query: 1 MAPTRGGSKRACVGSGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTR 60
M+P + + GGDRI DLPDEV+H VL FLP EAV+T LL+RRWR LWKS
Sbjct: 1 MSPRKKAKESP---GSTGGDRIGDLPDEVLHHVLSFLPAQEAVRTCLLARRWRHLWKSAT 57
Query: 61 RLSIAGLSRSPHLLXXXXXXXXXPATVDKLSKFVNHLLLSRKQGPLDEC--RFSFDGFKD 118
+ I P +V +F++HLL+ R P++ C RFS + K+
Sbjct: 58 GVRIG-------------EGETDPGSVKDHQEFLDHLLVLRDSVPMETCVLRFS-EHSKE 103
Query: 119 M--DGAQVDMWIRYVLDNVWQLRVL-LINLGTSIHVKLAGTPLVSENL 163
+ D A+++ W ++ L + ++R L L N V + PLVS +L
Sbjct: 104 LIEDAARLNFWFKHAL--LRKVRFLQLENWEFYDPVPIDELPLVSRHL 149
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 34/154 (22%)
Query: 170 CGLCANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSD 229
C C +DN C+LL GLS L L + F RDL+WCPTF+ L+TL+L++
Sbjct: 264 CESCYGIKDN-----KCVLLEGLSNAKTLVLINKQKSFIFRRDLKWCPTFTKLKTLLLNE 318
Query: 230 YNLDGGFHALLCFLQQTPVVQKLTLK--------LRKIHGPTVDISSYLKRPVVLRHLRI 281
Y AL C L+ +PV++ L L+ + KI+G + SS + + HL I
Sbjct: 319 YC------ALACILEHSPVLENLILQIYSEGPEHIMKING---NCSSVDRSAAISAHLEI 369
Query: 282 VEVKCPV--SVQEEIFKLWKILITWGRYIVQFNI 313
VE++C + + +E+ K Y+ FNI
Sbjct: 370 VEIRCEMIDNFVDEVLK----------YLSTFNI 393
>Os11g0209500 Cyclin-like F-box domain containing protein
Length = 365
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 80/162 (49%), Gaps = 30/162 (18%)
Query: 2 APTRGGSKRACVGSGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRR 61
+P+R G G DRI LPD V+H +L FLP +AV+T LL+RRWR LWKS
Sbjct: 13 SPSRSG--------GADEDRIGCLPDGVLHHILGFLPAPDAVRTCLLARRWRHLWKSATG 64
Query: 62 LSIAGLSRSPHLLXXXXXXXXXPATVDKLSKFVNHLLLSRKQGPLDECRFSFDGFKDMDG 121
L I+ V+KL FV+HLLL R PLD + D
Sbjct: 65 LRIS-----------------EGYGVEKLHDFVHHLLLLRGGAPLDTFELGSIDLAEGDN 107
Query: 122 AQVDMWIRYVLDNVWQLRVLLINLGTSIHVKLAGTPLVSENL 163
+++W R+ L + Q+RVL +N+ ++L P VS +L
Sbjct: 108 RSMNLWFRHAL--LCQVRVLRLNV---FGLELHDLPFVSRHL 144
>Os11g0209100 Cyclin-like F-box domain containing protein
Length = 416
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 78/156 (50%), Gaps = 24/156 (15%)
Query: 14 GSGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRRLSIAGLSRSPHL 73
S G DR DLPD ++H +L LP +A +T +L+RRWR LWK L I
Sbjct: 18 SSDGDEDRTGDLPDGILHHILGSLPARDAARTCVLARRWRHLWKFATGLRITD------- 70
Query: 74 LXXXXXXXXXPATVDKLSKFVNHLLLSRKQGPLDEC-----RFSFDGFKDMDGAQVDMWI 128
PA ++KL FV+HLLL R + PL+ C R S DG D +V++W
Sbjct: 71 -----REMREPAPMEKLQDFVDHLLLLRGRAPLETCWLNLTRLSSDG----DARRVNLWF 121
Query: 129 RY-VLDNVWQLRVLLINLGTSIHVKLAGTPLVSENL 163
R+ VL V LR+ LI G +KL PL S L
Sbjct: 122 RHAVLCEVQVLRLDLILNG--FQLKLDDLPLASRCL 155
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 135 VWQLRVLLINLGTSIHVKLAG-TPLVSENLDNYDALCGLCANCRDNDNISGTCLLLRGLS 193
V+++ L+++ +H + S N D + LC C C N N C++++ LS
Sbjct: 236 VFEVMPLIVDAFVRVHDRSGDWYSCTSGNADFEECLCEDCDFCHSNTN----CVIMQALS 291
Query: 194 RCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSD-YNLDGGFHALLCFLQQTPVVQKL 252
+ L LS Q F+++L CPTFSNL+TL+L + + + H + L+ TPV++KL
Sbjct: 292 QAKNLVLSAHEQEFIFKKELMRCPTFSNLKTLLLINCFCVAFDLHGITSILRHTPVIEKL 351
Query: 253 TLKLR---KIHGPTVDI----SSYLKRPVVLRHLRIVEVKCPVSVQEEIFKLWKILITWG 305
L+ H V++ S + + +HL++V VKC ++ I K+ K L T+
Sbjct: 352 ILEFFFEVTEHDDEVEMKGSCSQMERSSAISKHLKLVIVKCN-AIDGRITKILKFLSTFN 410
>Os11g0202200 Cyclin-like F-box domain containing protein
Length = 412
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 79/167 (47%), Gaps = 30/167 (17%)
Query: 8 SKRACVGSGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRRLSIAGL 67
S R GGDRI LPDEV+HRVL FLP +AV+T +L+ RWR LWKS L +
Sbjct: 2 SARKEAKGSAGGDRIGALPDEVLHRVLSFLPAQDAVRTCVLAPRWRHLWKSATGLRVG-- 59
Query: 68 SRSPHLLXXXXXXXXXPATVDKLSKFVNHLLLSRKQGPLDECRFSFDGFKDMDGAQV--- 124
+V + +F++HLL+ R PL+ C F+ + D D +
Sbjct: 60 -----------EDESNLGSVKEQQEFLDHLLVLRDSAPLETCVLRFNWYDDDDFEDIFRL 108
Query: 125 DMWIRYVLD--------NVWQLRVLLINLGTSIHVKLAGTPLVSENL 163
++W RY + +VWQ G V + P+VS++L
Sbjct: 109 NVWFRYAIHRKVRFLRLDVWQEE----EFGNP--VPIDEQPIVSQHL 149
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 22/191 (11%)
Query: 132 LDNVWQLRVLLINLGTSIHVKLAGTPLVSENL----DNYDALCGLCANCRDNDNISGTCL 187
LD ++ + +L + + + P SE+ D+ D C +C N C+
Sbjct: 221 LDRIYDRKPVLERMPSLVDA-FVSVPSSSEDFCGESDSGDCGRDGCESCYGFTN--KNCV 277
Query: 188 LLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSDY-NLDGGFHALLCFLQQT 246
LL GLS L L + F+RDL+WCPTFS L+TL+L+ Y + H L L+ +
Sbjct: 278 LLEGLSEAKMLVLINEDESFIFKRDLKWCPTFSKLKTLILNGYWCVPDDSHMLARILEHS 337
Query: 247 PVVQKLTLKL--------RKIHGPTVDISSYLKRPV-VLRHLRIVEVKCPVSVQEEIFKL 297
P ++KL +L KI G I + ++R + HL+IVEV+C ++ ++ K+
Sbjct: 338 PALEKLVFQLGYQAYKRTNKIKG----ILNPMERSAGISEHLQIVEVQCN-AIDGQVLKV 392
Query: 298 WKILITWGRYI 308
K L T+ Y
Sbjct: 393 LKYLSTFKIYF 403
>Os11g0209200 Similar to Ribosomal RNA apurinic site specific lyase
Length = 474
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 167 DALCGLCANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLV 226
D C C D S C+LL GLS L+L +++ F DLRWCP FS L+ L+
Sbjct: 313 DEDCDGCHGMIDKIGNSSNCVLLGGLSEAKSLKLIAGPEIIIFGSDLRWCPMFSKLKNLL 372
Query: 227 LSDYNLDGGFHALLCFLQQTPVVQKLTLKLRKIHGP---TVDISSYLKRPVVL-RHLRIV 282
L+++ L F AL C L+ +PV++KLTL++ K T + + L++P + HL++V
Sbjct: 373 LNEWCLLSNFWALACILEHSPVLRKLTLQISKEAKSMMQTEENDNPLRKPAAISEHLKVV 432
Query: 283 EVKCPVSVQEEIFKLWKILIT 303
+V C V E ++K+ K L T
Sbjct: 433 KVHCK-EVDEVVYKIGKWLST 452
>Os11g0208100 Cyclin-like F-box domain containing protein
Length = 436
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 164 DNYDALCGLCANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRW---CPTFS 220
D D C C N D C+ L GL T+LELS M F RDL C TF+
Sbjct: 264 DCGDDSCVDCCNYSDR----SKCVCLNGLLEATHLELSAEPAMYVFRRDLNLLLACHTFA 319
Query: 221 NLRTLVLSDYNLDGGFHALLCFLQQTPVVQKLTLKLRKIHGPTVDISS--YLKRPVVLRH 278
L+TL L ++ + AL+ FLQQ+P+++KLT+K+ + ++D + P V H
Sbjct: 320 KLKTLALGEWCMTHDLSALIRFLQQSPILEKLTIKIPEEPKCSMDAGQQKIPEEPFVSNH 379
Query: 279 LRIVEVKCPVSVQEEIFKLWKILITWGRYIVQFNIEST 316
L+IVE+KC + K K L T+G + + NI+ T
Sbjct: 380 LKIVEIKCKGKEVMWVCKFLKTLGTFGIPLEKINIKLT 417
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 27/170 (15%)
Query: 20 DRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRRLSIAGLSR-SPHLLXXXX 78
DR+S LPDE +H VL LP H+AV+T +L+RRWR LW+ L + + +P L
Sbjct: 20 DRVSALPDEALHAVLSLLPAHDAVRTCVLARRWRHLWEHAPALRVTDVEGWNPRL----- 74
Query: 79 XXXXXPATVDKLSKFVNHLLLSRKQ--GPLDECRFSFDGFKDMDGA--QVDMWIRYVLDN 134
+ + +FV+ L +SR++ PL+ C FD F + G V+ WI L
Sbjct: 75 ----RGDGLGRFIRFVDGLFVSRRRRDAPLELCDLDFD-FPEDKGKDWHVNRWIMLALLR 129
Query: 135 VWQLRVLLINLGTSIHVKLAGTPLVSENLD--NYDALCGLCANCRDNDNI 182
RVL I+L ++ L PL+S+ L D + G NDNI
Sbjct: 130 -HHARVLRISLPA--YITLPDVPLISQRLTRLELDGVLG-------NDNI 169
>Os06g0493300
Length = 429
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 89/151 (58%), Gaps = 18/151 (11%)
Query: 170 CGL--CANCRD-NDNISGTCLLLRGLSRCTYLELSPSYQM-------LTFERDLRWCPTF 219
CG+ C C D+++G+ + L LS T++EL+ +M F+RDL+WCP F
Sbjct: 258 CGIEDCEGCYAIGDHLNGS-VFLHHLSHTTHMELTNDCRMNMNDSISTIFDRDLKWCPLF 316
Query: 220 SNLRTLVLSDYNLDGGFHALLCFLQQTPVVQKLTLKLRKIHGPTVD-ISSY--LKRPVVL 276
NL+TL+L+++ L+ G +L LQ +P ++K+TLKL V+ SY +++P V+
Sbjct: 317 RNLKTLLLNEWFLENGLRGVLRILQHSPALEKITLKLYMEPKKIVENEESYGTMEQPFVM 376
Query: 277 RHLRIVEVKCPVSVQEEIFKLWKILITWGRY 307
HL+ + VKC Q+E+ + KI++T ++
Sbjct: 377 NHLKKISVKC----QKEVMWVKKIIMTLTQF 403
>Os10g0127000 Conserved hypothetical protein
Length = 157
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 189 LRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSDYNLDGGFHALLCFLQQTPV 248
L LS T LE + LTFE +L+WCP F ++ L L + LD F+AL+ FLQ +P
Sbjct: 13 LWSLSGVTNLEFNYEGTELTFENNLQWCPEFIDVVNLTLGQWCLDANFYALIVFLQNSPR 72
Query: 249 VQKLTLKLRKI---HGPTVDISSYLKRPVVLRHLRIVEVKCPVSVQEEIFKLWKILITWG 305
++KLTL L K P + + ++R HL+IVEVKC + ++ + + G
Sbjct: 73 LEKLTLNLAKCIADKSPRI-VGELMERSFTCEHLKIVEVKC-LEDDPQVISVEDFFASNG 130
Query: 306 RYIVQFNIE 314
VQF+I+
Sbjct: 131 MASVQFDIK 139
>Os11g0208400 Cyclin-like F-box domain containing protein
Length = 425
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 6/142 (4%)
Query: 167 DALCGLCANCRDN-DNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTL 225
D C C DN N S C+LL GLS LEL +M F DLRWCP FS L++L
Sbjct: 269 DEYCHGCYGMVDNAGNDSAKCVLLGGLSEAKKLELIAGPEMRIFRSDLRWCPLFSKLKSL 328
Query: 226 VLSDYNLDGGFHALLCFLQQTPVVQKLTLKLRKIHGPTV----DISSYLKRPVVLRHLRI 281
+L+++ + F AL C L+ +PV+ KLTL++ K P + + S+ +K + +HL++
Sbjct: 329 LLNEWCVANNFWALACILEHSPVLLKLTLQISKETKPMIGAVENYSALVKPAAISKHLKV 388
Query: 282 VEVKCPVSVQEEIFKLWKILIT 303
V+V C V E + + K L T
Sbjct: 389 VKVHCK-EVDEGVCETVKFLST 409
>Os11g0202000 Cyclin-like F-box domain containing protein
Length = 453
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 170 CGLCANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSD 229
C C +D++N C+LL GLS L L F RDL+WCPTFS L+TL+L++
Sbjct: 269 CKSCHGIKDDNN----CVLLDGLSEAKTLALIDGTISFIFNRDLKWCPTFSKLKTLLLNE 324
Query: 230 Y-NLDGGFHALLCFLQQTPVVQKLTLKLRKIHGP--TVDISSYL----KRPVVLRHLRIV 282
Y + F AL C L+ PV++ L L+L GP T+ I + + HL V
Sbjct: 325 YWCVPDEFSALACILEHAPVLENLILQLYS-EGPKHTMKIKGNCHPMDRSAAISGHLETV 383
Query: 283 EVKCPVSVQEEIFKLWKILITWG 305
E++C V V + + K+ K L T+
Sbjct: 384 EIRCEV-VDKRVLKVLKYLSTFN 405
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 19 GDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRRLSIAGLSRSPHLLXXXX 78
D I LPD V+H VL FLP+ +AV+T +L++RW +LWKS L I +
Sbjct: 16 ADHIGALPDTVLHHVLSFLPSQDAVRTCVLAKRWLDLWKSVTALRIGDRDKR-------- 67
Query: 79 XXXXXPATVDKLSKFVNHLLLSRKQGPLDECRFSFDGFKD--MDGAQVDMWIRYVLDNVW 136
TV L FV+H LL R+ PL C F F + + +++++WI++ L +
Sbjct: 68 ----KLWTVKGLQGFVDHFLLLRESVPLHTCVLRFIVFSEDLNETSRLNLWIKHALLRMV 123
Query: 137 QLRVLLINLGTSIH--VKLAGTPLVSENL 163
Q + I T+ + + L P VS +L
Sbjct: 124 QFLQVSIRQNTAFYHQINLGILPFVSRHL 152
>Os11g0262500
Length = 419
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 21/129 (16%)
Query: 4 TRGGSKRACVGSGGGGDRISDLPDEVIHRVLWFLPTHEAVKTSLLSRRWRELWKSTRRLS 63
T G+K+ V G D IS LPDE++ +L F+P+ EAV+T +LS+RWR WK L
Sbjct: 6 TNEGNKK--VVMADGADHISALPDELLQYLLSFIPSREAVQTCVLSQRWRHQWKYVPALR 63
Query: 64 IAGLSRSPHLLXXXXXXXXXPATVDKLSKFVNHLLLSRKQGPLDECRFSFDGFKDMDGAQ 123
I + +V +L+KFV+HLLL RK+ PL C D F++ + A+
Sbjct: 64 INDVDSF--------------YSVQQLNKFVHHLLLHRKRTPLYVCE--LDSFRNGEVAE 107
Query: 124 VDMWIRYVL 132
W +Y +
Sbjct: 108 ---WYQYAV 113
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 163 LDNYDALCGLCANC-----RDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCP 217
L +Y CG +C R D C+LL GLS T LEL S ++ +DL P
Sbjct: 246 LHSYYGDCGDQVSCGKYCTRFYDVHDDDCVLLGGLSNVTNLELITSPKVFIVRKDLLMRP 305
Query: 218 TFSNLRTLVLSDYNLDGGFHALLCFLQQTPVVQKLTLKLRKIHGPTV--DISSYLKRPVV 275
TFS L+TL+L+ + D GF L+ L+ +PV++KLTL+L + + D S L+ +V
Sbjct: 306 TFSKLKTLLLNVSDADAGFGPLVYILRSSPVLEKLTLQLYEEPKAKIETDGSCNLEEQLV 365
Query: 276 L-RHLRIVEVKCPVSVQEEIFKLWKILITWGRYIVQFNIESTH 317
+ L++VE+K V + ++ +IL T G + NIE T
Sbjct: 366 ASKKLKVVEIKYSKIVV--LCRVLQILNTCGVPRKKINIERTE 406
>Os11g0202300 Conserved hypothetical protein
Length = 228
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 18/145 (12%)
Query: 170 CGLCANCRDNDNISGTCLLLRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSD 229
C C +DN+ C+LL GLS L L +RDL+W PTF+ L+TL+L++
Sbjct: 32 CESCYGIKDNN-----CVLLEGLSEAKTLGLISERGSFILKRDLKWRPTFTKLKTLLLNE 86
Query: 230 Y-NLDGGFHALLCFLQQTPVVQKLTLKL--------RKIHGPTVDISSYLKRPVVLRHLR 280
Y + F AL C LQ PV++ L L++ KI G + S L V+ HL
Sbjct: 87 YWCVPDDFSALTCILQHAPVLENLILQICSKGPKHRMKIKGNCHSMDSSL---VISAHLE 143
Query: 281 IVEVKCPVSVQEEIFKLWKILITWG 305
IVE+KC +V + + K+ K L T+
Sbjct: 144 IVEIKCE-TVDKRVLKVLKYLSTFN 167
>Os10g0128200 Cyclin-like F-box domain containing protein
Length = 421
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 189 LRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSDYNLDGGFHALLCFLQQTPV 248
L GLS LE L + +WCP F ++ L L ++ LD FHAL+ FLQ +P
Sbjct: 279 LWGLSAVRNLEFHYEGAELMIANNSQWCPEFVDVVNLTLGEWCLDANFHALIVFLQNSPR 338
Query: 249 VQKLTLKLRKIH--GPTVDISSYLKRPVVLRHLRIVEVKCPVSVQEEIFKLWKILITWGR 306
+ KLTLKL K P I +R HL+IVEV C + ++ + + G
Sbjct: 339 LVKLTLKLAKDRWTTPQRIIGELEERSFTCEHLKIVEVIC-LENDPQVIGVEDFFVRSGM 397
Query: 307 YIVQFNIESTHYRLDWTIKMPKL 329
VQF+I+ H+R D K+P
Sbjct: 398 TSVQFHIK--HWRKDEEYKLPAF 418
>Os10g0127900 Conserved hypothetical protein
Length = 292
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 68/134 (50%), Gaps = 15/134 (11%)
Query: 189 LRGLSRCTYLELSPSYQMLTFERDLRWCPTFSNLRTLVLSDYNLDGGFHALLCFLQQTPV 248
L+ LS T LE + LT E L+WCP F N+ L L + LD F+AL+ FLQ +P
Sbjct: 150 LQSLSGITNLEFNYQGSKLTIENHLQWCPEFLNVVNLTLGQWCLDSNFYALIVFLQNSPR 209
Query: 249 VQKLTLKL--------RKIHGPTVDISSYLKRPVVLRHLRIVEVKCPVSVQEEIFKLWKI 300
+QKLTLKL R+I G +IS HL VEV C + ++ +
Sbjct: 210 LQKLTLKLEKSNMRISRRIIGELTEIS------FTCEHLNTVEVICSEN-DPQVITVQDF 262
Query: 301 LITWGRYIVQFNIE 314
++ G VQF+I+
Sbjct: 263 FVSSGMTSVQFHIK 276
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.139 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,636,079
Number of extensions: 581010
Number of successful extensions: 2834
Number of sequences better than 1.0e-10: 32
Number of HSP's gapped: 2798
Number of HSP's successfully gapped: 48
Length of query: 386
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 283
Effective length of database: 11,657,759
Effective search space: 3299145797
Effective search space used: 3299145797
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)