Os06g0556300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os06g0556300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.24 | 0.371 | 7.97 | 0.126 | 1.95 | 0.621 | 0.132 | 0.418 | 0.141 | 20.6 | 25.7 | 87 | -- | -- |
| 62.27 | 0.368 | 7.97 | 0.0891 | 1.96 | 0.64 | 0.16 | -- | 0.141 | 20.6 | 25.9 | 72 | -- | -- |
| 62.28 | 0.368 | 7.97 | 0.115 | 1.95 | 0.637 | -- | 0.38 | 0.142 | 20.6 | 25.9 | 83 | -- | -- |
| 62.31 | 0.368 | 7.97 | 0.0798 | 1.96 | 0.669 | -- | -- | 0.139 | 20.6 | 26 | 73 | -- | -- |
| 204.75 | 0.666 | 8.02 | -0.796 | -- | 2.06 | -- | -3.97 | -0.182 | -- | 24.6 | 575 | -- | -- |
| 69.23 | 0.39 | 7.97 | 0.187 | 2.03 | -- | 0.287 | -- | 0.163 | 20.1 | -- | -- | -- | -- |
| 69.48 | 0.39 | 7.97 | 0.179 | 2.03 | -- | -- | -- | 0.163 | 20.2 | -- | -- | -- | -- |
| 209.61 | 0.674 | 7.96 | -0.15 | -- | 1.76 | -- | -- | -0.0396 | -- | 24.4 | 555 | -- | -- |
| 62.46 | 0.368 | 7.98 | -- | 1.96 | 0.688 | -- | -- | 0.126 | 20.6 | 25.9 | 73 | -- | -- |
| 297.15 | 0.805 | 7.92 | 0.162 | -- | -- | -- | -- | 0.139 | -- | -- | -- | -- | -- |
| 70.33 | 0.392 | 7.97 | -- | 2.03 | -- | -- | -- | 0.143 | 20.2 | -- | -- | -- | -- |
| 210.19 | 0.675 | 7.95 | -- | -- | 1.72 | -- | -- | 0.00305 | -- | 24.5 | 555 | -- | -- |
| 297.84 | 0.806 | 7.92 | -- | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.57 | radiation | 1.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 3 | 54.97 | radiation | 1.0 | 90 | < th | dose independent | sin | 8 | NA |
| 8 | 55.29 | radiation | 1.0 | 90 | > th | dose independent | sin | 7 | NA |
| 13 | 55.53 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 11 |
| 15 | 55.59 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 9 | 10 |
| 29 | 55.71 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 11 |
| 32 | 55.74 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 16 |
| 38 | 55.82 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 8 |
| 44 | 55.92 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 16 |
| 69 | 56.70 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 11 |
| 77 | 56.81 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 78 | 56.87 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 82 | 56.97 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 97 | 57.28 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 7 |
| 107 | 57.33 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 5 |
| 113 | 57.38 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 7 |
| 133 | 57.42 | radiation | 1.0 | 10 | < th | dose independent | rect. | 24 | 6 |
| 134 | 57.42 | wind | 9.0 | 10 | < th | dose independent | rect. | 12 | 17 |
| 166 | 57.48 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 209 | 57.57 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 20 |
| 223 | 57.61 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 258 | 57.77 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 23 | 6 |
| 266 | 57.81 | wind | 7.0 | 90 | < th | dose independent | rect. | 12 | 17 |
| 289 | 57.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 290 | 57.96 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 291 | 57.96 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 294 | 57.96 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 295 | 57.96 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 300 | 57.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 20 |
| 301 | 57.96 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 307 | 57.97 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 315 | 58.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 4 |
| 316 | 58.02 | wind | 9.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 317 | 58.02 | temperature | 10.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 318 | 58.02 | temperature | 30.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 319 | 58.02 | humidity | 50.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 322 | 58.02 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 323 | 58.02 | radiation | 20.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 326 | 58.02 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 327 | 58.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 328 | 58.03 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 330 | 58.04 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 340 | 58.06 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 17 |
| 342 | 58.07 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 352 | 58.12 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 354 | 58.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 20 |
| 355 | 58.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 359 | 58.15 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 7 |
| 360 | 58.15 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 374 | 58.20 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 7 |
| 376 | 58.20 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 7 |
| 377 | 58.20 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 7 |
| 378 | 58.20 | temperature | 10.0 | 10 | > th | dose independent | rect. | 12 | 17 |
| 404 | 58.23 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 405 | 58.24 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 8 |
| 406 | 58.24 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 448 | 58.31 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 477 | 58.35 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 478 | 58.35 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 23 | 6 |
| 480 | 58.35 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 483 | 58.38 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 20 |
| 503 | 58.43 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 18 |
| 504 | 58.43 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 510 | 58.47 | wind | 1.0 | 90 | > th | dose independent | rect. | 24 | 5 |
| 511 | 58.47 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 7 |
| 539 | 58.51 | temperature | 25.0 | 90 | > th | dose independent | rect. | 9 | 10 |
| 547 | 58.54 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 555 | 58.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 20 |
| 558 | 58.58 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 24 | 5 |
| 579 | 58.62 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 12 | 17 |
| 582 | 58.62 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 12 | 17 |
| 588 | 58.67 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 589 | 58.67 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 7 |
| 590 | 58.67 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 7 |
| 602 | 58.70 | temperature | 15.0 | 10 | > th | dose independent | rect. | 5 | 19 |
| 603 | 58.70 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 6 |
| 606 | 58.71 | wind | 9.0 | 10 | < th | dose independent | rect. | 1 | 4 |
| 607 | 58.71 | temperature | 10.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 609 | 58.71 | temperature | 30.0 | 10 | < th | dose independent | rect. | 1 | 4 |
| 610 | 58.71 | humidity | 50.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 613 | 58.71 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 614 | 58.71 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 1 | 4 |
| 638 | 58.72 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 12 | 17 |
| 641 | 58.72 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 20 |
| 653 | 58.74 | wind | 9.0 | 270 | < th | dose dependent | rect. | 23 | 3 |
| 662 | 58.78 | temperature | 25.0 | 270 | > th | dose independent | rect. | 9 | 7 |
| 666 | 58.78 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 20 |
| 669 | 58.79 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 675 | 58.80 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 7 |
| 677 | 58.81 | wind | 7.0 | 270 | < th | dose independent | rect. | 9 | 19 |
| 678 | 58.81 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 20 |
| 680 | 58.81 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 20 |
| 697 | 58.84 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 706 | 58.86 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 736 | 58.92 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 7 |
| 744 | 58.95 | temperature | 20.0 | 10 | > th | dose dependent | sin | 21 | NA |
| 768 | 59.00 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 19 |
| 819 | 59.04 | wind | 7.0 | 270 | < th | dose independent | rect. | 23 | 15 |
| 838 | 59.06 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 871 | 59.11 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 1 | 4 |
| 872 | 59.11 | wind | 7.0 | 270 | < th | dose independent | rect. | 8 | 9 |
| 878 | 59.11 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 1 | 4 |
| 885 | 59.12 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 888 | 59.12 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 24 | 5 |
| 919 | 59.14 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 18 |
| 929 | 59.16 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 20 |
| 948 | 59.18 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 4 | 18 |
| 967 | 59.21 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 998 | 59.25 | wind | 9.0 | 30 | < th | dose dependent | rect. | 12 | 17 |