Os11g0201600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0201600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.26 | 0.287 | 3.08 | 0.12 | 0.201 | -0.174 | 0.0932 | -0.402 | -0.0404 | 6.42 | 90.84 | 155 | -- | -- |
| 37.48 | 0.285 | 3.08 | 0.111 | 0.188 | -0.212 | -0.0144 | -- | -0.0457 | 6.58 | 91.99 | 155 | -- | -- |
| 37.28 | 0.284 | 3.08 | 0.12 | 0.199 | -0.172 | -- | -0.358 | -0.0409 | 6.41 | 90.92 | 155 | -- | -- |
| 37.47 | 0.285 | 3.08 | 0.11 | 0.195 | -0.212 | -- | -- | -0.0451 | 6.5 | 92 | 155 | -- | -- |
| 38.54 | 0.289 | 3.08 | 0.127 | -- | -0.0171 | -- | -0.363 | -0.00761 | -- | 77.99 | 10 | -- | -- |
| 38.27 | 0.29 | 3.07 | 0.0916 | 0.132 | -- | -0.0219 | -- | -0.0134 | 7.61 | -- | -- | -- | -- |
| 38.27 | 0.29 | 3.07 | 0.0912 | 0.132 | -- | -- | -- | -0.0133 | 7.69 | -- | -- | -- | -- |
| 38.95 | 0.291 | 3.08 | 0.105 | -- | -0.0776 | -- | -- | -0.0247 | -- | 89.01 | 8 | -- | -- |
| 37.79 | 0.286 | 3.08 | -- | 0.192 | -0.196 | -- | -- | -0.0547 | 6.52 | 92 | 155 | -- | -- |
| 39.21 | 0.293 | 3.08 | 0.0929 | -- | -- | -- | -- | -0.0114 | -- | -- | -- | -- | -- |
| 38.49 | 0.29 | 3.07 | -- | 0.132 | -- | -- | -- | -0.0235 | 7.64 | -- | -- | -- | -- |
| 39.24 | 0.292 | 3.08 | -- | -- | -0.0678 | -- | -- | -0.0349 | -- | 89 | 8 | -- | -- |
| 39.43 | 0.293 | 3.08 | -- | -- | -- | -- | -- | -0.0217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.64 | humidity | 90.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 2 | 35.67 | wind | 5.0 | 90 | > th | dose independent | rect. | 7 | 1 |
| 6 | 35.67 | wind | 5.0 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 10 | 35.69 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 24 | 35.69 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 40 | 35.72 | wind | 5.0 | 30 | > th | dose dependent | rect. | 1 | 7 |
| 54 | 35.85 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 2 |
| 59 | 35.88 | wind | 5.0 | 10 | > th | dose independent | rect. | 1 | 7 |
| 62 | 35.90 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 70 | 35.97 | wind | 5.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 79 | 36.04 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 80 | 36.07 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 81 | 36.09 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 84 | 36.11 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 88 | 36.14 | wind | 5.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 92 | 36.17 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 94 | 36.17 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 95 | 36.17 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 98 | 36.17 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 99 | 36.17 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 100 | 36.17 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 102 | 36.17 | radiation | 1.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 107 | 36.17 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 109 | 36.17 | wind | 9.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 110 | 36.17 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 122 | 36.20 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 1 |
| 124 | 36.20 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 126 | 36.22 | temperature | 25.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 127 | 36.22 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 128 | 36.22 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 133 | 36.24 | humidity | 90.0 | 720 | < th | dose independent | rect. | 24 | 5 |
| 166 | 36.26 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 172 | 36.27 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 175 | 36.27 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 177 | 36.28 | humidity | 90.0 | 720 | < th | dose independent | rect. | 1 | 2 |
| 191 | 36.31 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 192 | 36.32 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 207 | 36.35 | temperature | 25.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 217 | 36.38 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 219 | 36.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 222 | 36.38 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 226 | 36.38 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 235 | 36.38 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 236 | 36.38 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 237 | 36.38 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 248 | 36.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 257 | 36.42 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 272 | 36.48 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 23 |
| 274 | 36.48 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 277 | 36.51 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 287 | 36.55 | humidity | 90.0 | 720 | > th | dose independent | rect. | 2 | 2 |
| 292 | 36.55 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 330 | 36.63 | humidity | 90.0 | 720 | > th | dose independent | rect. | 1 | 4 |
| 359 | 36.69 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 387 | 36.74 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 395 | 36.75 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 4 | 14 |
| 396 | 36.76 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 4 |
| 400 | 36.76 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 4 | 8 |
| 465 | 36.81 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 2 |
| 494 | 36.84 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 607 | 36.93 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 609 | 36.94 | humidity | 90.0 | 10 | > th | dose independent | sin | 4 | NA |
| 621 | 36.94 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 24 | 4 |
| 646 | 36.96 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 11 |
| 666 | 36.97 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 7 |
| 683 | 36.98 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 686 | 36.98 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 21 |
| 687 | 36.98 | temperature | 20.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 688 | 36.98 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 702 | 36.99 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 703 | 36.99 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 15 |
| 716 | 36.99 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 23 | 5 |
| 719 | 37.00 | radiation | 10.0 | 90 | > th | dose independent | sin | 10 | NA |
| 741 | 37.01 | radiation | 10.0 | 270 | > th | dose independent | rect. | 16 | 17 |
| 779 | 37.03 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 786 | 37.04 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 798 | 37.04 | humidity | 90.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 804 | 37.04 | radiation | 1.0 | 10 | < th | dose independent | rect. | 4 | 10 |
| 810 | 37.04 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 21 | 14 |
| 820 | 37.04 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 4 | 10 |
| 824 | 37.05 | temperature | 20.0 | 270 | < th | dose independent | rect. | 5 | 2 |
| 839 | 37.05 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 850 | 37.06 | wind | 3.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 883 | 37.07 | wind | 5.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 892 | 37.07 | temperature | 15.0 | 10 | > th | dose independent | rect. | 6 | 20 |
| 906 | 37.08 | humidity | 80.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 909 | 37.08 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 916 | 37.08 | wind | 7.0 | 720 | < th | dose independent | rect. | 17 | 12 |
| 930 | 37.08 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 936 | 37.09 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 939 | 37.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 951 | 37.09 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 962 | 37.09 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 968 | 37.09 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 985 | 37.09 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 5 | 12 |
| 989 | 37.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 21 |