Os11g0209600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os11g0209600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.47 | 0.403 | 4.29 | 1.13 | 2.16 | -0.984 | 1.16 | -2.23 | 0.419 | 19.5 | 20.1 | 4072 | -- | -- |
| 75.9 | 0.406 | 4.39 | 0.928 | 2.16 | -0.474 | 1.26 | -- | 0.282 | 19.5 | 23.5 | 1541 | -- | -- |
| 76.07 | 0.406 | 4.29 | 1.21 | 2.16 | -0.833 | -- | -2.05 | 0.418 | 19.4 | 21.1 | 3892 | -- | -- |
| 79.9 | 0.416 | 4.38 | 0.919 | 2.17 | -0.471 | -- | -- | 0.295 | 19.5 | 23.4 | 1425 | -- | -- |
| 294.55 | 0.799 | 4.33 | 0.88 | -- | -1.14 | -- | -0.852 | 0.238 | -- | 26.25 | 2051 | -- | -- |
| 85.64 | 0.434 | 4.34 | 1.13 | 2.16 | -- | 1.2 | -- | 0.494 | 19.5 | -- | -- | -- | -- |
| 89.62 | 0.443 | 4.34 | 1.1 | 2.16 | -- | -- | -- | 0.497 | 19.5 | -- | -- | -- | -- |
| 189.7 | 0.641 | 4.34 | 0.69 | -- | -1.83 | -- | -- | 0.267 | -- | 27.5 | 612 | -- | -- |
| 84.49 | 0.428 | 4.43 | -- | 2.16 | -0.93 | -- | -- | 0.107 | 19.5 | 19.95 | 47520 | -- | -- |
| 339.06 | 0.86 | 4.29 | 1.07 | -- | -- | -- | -- | 0.463 | -- | -- | -- | -- | -- |
| 121.69 | 0.516 | 4.37 | -- | 2.15 | -- | -- | -- | 0.374 | 19.5 | -- | -- | -- | -- |
| 198.57 | 0.656 | 4.37 | -- | -- | -1.96 | -- | -- | 0.114 | -- | 27.5 | 603 | -- | -- |
| 369.28 | 0.897 | 4.31 | -- | -- | -- | -- | -- | 0.344 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.06 | temperature | 30 | 10 | < th | dose dependent | sin | 19 | NA |
| 6 | 71.62 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 17 | 71.91 | temperature | 10 | 10 | > th | dose dependent | sin | 18 | NA |
| 18 | 71.92 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 22 | 71.96 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 27 | 72.01 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 10 |
| 42 | 72.16 | temperature | 15 | 4320 | > th | dose dependent | rect. | 1 | 2 |
| 44 | 72.17 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 12 |
| 51 | 72.20 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 10 |
| 54 | 72.21 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 74 | 72.26 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 86 | 72.30 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 87 | 72.30 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 94 | 72.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 123 | 72.39 | temperature | 20 | 10 | > th | dose dependent | sin | 17 | NA |
| 128 | 72.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 13 |
| 136 | 72.42 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 138 | 72.42 | temperature | 10 | 720 | > th | dose dependent | sin | 21 | NA |
| 157 | 72.46 | temperature | 25 | 4320 | < th | dose dependent | sin | 13 | NA |
| 176 | 72.49 | temperature | 10 | 10 | > th | dose dependent | sin | 15 | NA |
| 187 | 72.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 196 | 72.52 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 12 |
| 219 | 72.55 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 250 | 72.59 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 255 | 72.59 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 12 |
| 257 | 72.59 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 275 | 72.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 11 |
| 277 | 72.61 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 296 | 72.63 | temperature | 25 | 90 | < th | dose independent | sin | 19 | NA |
| 373 | 72.71 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 17 |
| 502 | 72.86 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 14 |
| 572 | 72.92 | temperature | 25 | 10 | < th | dose independent | sin | 19 | NA |
| 649 | 73.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 653 | 73.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 666 | 73.03 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 689 | 73.05 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 722 | 73.07 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 802 | 73.12 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 17 |
| 834 | 73.16 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 2 |
| 920 | 73.22 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 997 | 73.27 | temperature | 25 | 90 | > th | dose independent | sin | 19 | NA |