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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0231600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.8 (0.021) R2 : 0.00249
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0471 (0.0441) R2dN8 : 0.00321 R2N8 : 0.00249
σ : 0.395
deviance : 71.53
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
68.72 0.386 2.81 -0.19 0.0836 0.365 -0.326 -1 0.0276 3.43 1015 10 -- --
69.15 0.39 2.81 -0.202 0.0827 0.374 -0.374 -- 0.0255 3.17 1015 10 -- --
69.05 0.39 2.81 -0.182 0.0822 0.349 -- -1.09 0.0297 3.52 1015 10 -- --
69.6 0.391 2.81 -0.195 0.0821 0.379 -- -- 0.0277 3.55 1015 10 -- --
69.42 0.39 2.81 -0.179 -- 0.376 -- -1.09 0.0322 -- 1015 10 -- --
69.63 0.391 2.81 -0.205 0.0905 -- -0.373 -- 0.0212 3 -- -- -- --
70.1 0.392 2.81 -0.197 0.0894 -- -- -- 0.0234 3.14 -- -- -- --
69.98 0.391 2.81 -0.191 -- 0.406 -- -- 0.0301 -- 1015 10 -- --
70.6 0.393 2.8 -- 0.0782 0.387 -- -- 0.0494 3.58 1015 10 -- --
70.55 0.392 2.81 -0.193 -- -- -- -- 0.0257 -- -- -- -- --
71.12 0.394 2.8 -- 0.0855 -- -- -- 0.0453 3.13 -- -- -- --
70.94 0.394 2.8 -- -- 0.411 -- -- 0.0514 -- 1015 10 -- --
71.53 0.395 2.8 -- -- -- -- -- 0.0471 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 63.83 temperature 20.0 90 < th dose dependent rect. 2 1
4 65.99 temperature 20.0 90 < th dose independent rect. 2 3
6 66.10 temperature 25.0 30 > th dose dependent rect. 19 1
7 66.11 temperature 20.0 90 < th dose independent rect. 2 1
9 66.14 atmosphere 1005.0 10 < th dose independent rect. 3 1
33 66.35 radiation 30.0 10 > th dose dependent rect. 13 1
37 66.46 radiation 40.0 30 > th dose independent rect. 13 1
58 66.50 humidity 80.0 30 < th dose dependent rect. 13 1
75 66.68 humidity 80.0 10 < th dose independent rect. 13 1
78 66.68 atmosphere 1015.0 270 < th dose independent rect. 14 10
81 66.70 temperature 20.0 720 < th dose dependent rect. 17 1
126 66.85 temperature 25.0 10 > th dose independent rect. 12 19
127 66.86 humidity 90.0 30 > th dose dependent rect. 4 1
128 66.87 atmosphere 1015.0 90 < th dose independent rect. 5 22
129 66.89 humidity 90.0 90 > th dose dependent rect. 2 3
130 66.90 atmosphere 1015.0 10 < th dose independent rect. 14 23
133 66.92 temperature 25.0 10 > th dose independent rect. 13 1
165 67.03 atmosphere 1015.0 10 < th dose independent rect. 16 11
194 67.11 temperature 20.0 720 < th dose independent rect. 16 1
195 67.11 humidity 90.0 90 > th dose independent rect. 2 3
197 67.12 wind 1.0 10 > th dose independent rect. 13 16
198 67.12 wind 1.0 270 > th dose independent rect. 9 21
204 67.15 wind 1.0 270 > th dose independent rect. 24 14
209 67.16 atmosphere 1015.0 30 < th dose independent rect. 14 13
228 67.23 atmosphere 1015.0 10 < th dose independent rect. 7 20
252 67.29 wind 9.0 10 > th dose independent rect. 13 1
267 67.29 wind 9.0 10 > th dose dependent rect. 13 1
290 67.31 radiation 1.0 10 > th dose independent rect. 17 20
316 67.36 radiation 1.0 10 > th dose independent rect. 5 8
338 67.38 temperature 15.0 30 > th dose dependent rect. 13 1
358 67.40 wind 3.0 30 > th dose dependent rect. 13 1
366 67.42 radiation 1.0 10 < th dose independent rect. 3 9
373 67.43 atmosphere 1015.0 270 < th dose independent rect. 21 13
404 67.48 radiation 1.0 10 < th dose dependent rect. 3 9
406 67.49 wind 1.0 90 > th dose independent rect. 3 2
414 67.50 wind 1.0 10 > th dose independent rect. 3 2
420 67.50 atmosphere 1010.0 30 < th dose dependent rect. 3 2
425 67.52 wind 1.0 90 > th dose independent rect. 12 17
465 67.58 humidity 50.0 270 > th dose independent rect. 1 13
470 67.58 atmosphere 995.0 720 > th dose dependent rect. 17 4
471 67.59 wind 1.0 720 > th dose independent rect. 2 3
502 67.62 radiation 1.0 10 < th dose independent rect. 3 4
507 67.62 precipitation 0.1 270 < th dose independent rect. 14 11
508 67.62 precipitation 0.1 270 < th dose dependent rect. 14 11
511 67.63 precipitation 0.1 270 < th dose independent rect. 1 13
515 67.63 precipitation 0.1 270 < th dose dependent rect. 1 13
519 67.64 temperature 10.0 270 > th dose independent rect. 14 11
521 67.64 temperature 10.0 270 > th dose independent rect. 1 13
522 67.64 atmosphere 995.0 270 > th dose independent rect. 1 13
523 67.64 atmosphere 1015.0 270 < th dose independent rect. 1 13
536 67.65 atmosphere 995.0 270 > th dose independent rect. 14 11
539 67.65 humidity 50.0 10 > th dose independent rect. 3 13
559 67.66 radiation 1.0 30 < th dose dependent rect. 3 3
582 67.67 radiation 1.0 10 > th dose independent rect. 14 23
589 67.67 temperature 20.0 10 < th dose dependent rect. 24 3
609 67.69 wind 5.0 90 < th dose independent rect. 3 2
623 67.70 radiation 1.0 10 > th dose independent rect. 7 5
639 67.72 atmosphere 1000.0 90 > th dose independent rect. 3 2
647 67.73 precipitation 0.1 90 < th dose independent rect. 3 2
648 67.73 temperature 25.0 30 > th dose independent rect. 12 13
657 67.73 precipitation 0.1 90 < th dose dependent rect. 3 2
658 67.73 humidity 50.0 720 > th dose dependent rect. 2 3
667 67.74 precipitation 0.1 90 < th dose independent rect. 5 22
673 67.74 precipitation 0.1 90 < th dose dependent rect. 5 22
682 67.75 humidity 80.0 270 > th dose dependent rect. 24 4
683 67.76 wind 1.0 30 > th dose independent rect. 13 1
687 67.76 radiation 30.0 14400 < th dose independent rect. 17 11
688 67.76 temperature 30.0 270 < th dose independent rect. 1 13
698 67.77 temperature 10.0 90 > th dose independent rect. 3 2
700 67.77 temperature 30.0 90 < th dose independent rect. 3 2
701 67.77 humidity 50.0 90 > th dose independent rect. 3 2
707 67.77 radiation 20.0 90 < th dose independent rect. 3 2
713 67.77 temperature 10.0 90 > th dose independent rect. 5 22
723 67.78 temperature 10.0 10 > th dose independent rect. 13 1
726 67.78 atmosphere 995.0 10 > th dose independent rect. 13 1
727 67.78 atmosphere 1010.0 10 < th dose independent rect. 13 1
729 67.78 precipitation 0.1 10 < th dose independent rect. 13 1
730 67.78 humidity 80.0 720 > th dose independent rect. 2 3
734 67.78 humidity 50.0 270 > th dose independent rect. 9 21
736 67.78 atmosphere 995.0 90 > th dose independent rect. 5 22
737 67.78 temperature 10.0 10 > th dose independent rect. 14 23
739 67.78 precipitation 0.1 10 < th dose dependent rect. 13 1
742 67.78 radiation 40.0 30 < th dose dependent rect. 14 13
745 67.79 temperature 10.0 1440 > th dose independent rect. 14 1
749 67.79 humidity 50.0 10 > th dose independent rect. 13 1
755 67.79 wind 1.0 90 > th dose independent rect. 5 7
757 67.79 wind 9.0 270 < th dose independent rect. 14 11
767 67.79 temperature 10.0 1440 > th dose independent rect. 15 23
775 67.79 radiation 30.0 90 < th dose dependent rect. 3 2
780 67.80 precipitation 0.1 270 > th dose independent rect. 1 1
783 67.80 wind 9.0 270 < th dose independent rect. 1 13
786 67.80 precipitation 0.1 270 > th dose dependent rect. 1 1
793 67.80 atmosphere 1015.0 10 < th dose dependent rect. 16 11
794 67.81 atmosphere 995.0 1440 > th dose independent rect. 4 11
799 67.81 atmosphere 1015.0 10 < th dose independent rect. 21 15
800 67.81 atmosphere 1000.0 90 > th dose independent rect. 12 17
803 67.81 atmosphere 995.0 10 > th dose independent rect. 14 23
805 67.81 atmosphere 1000.0 720 > th dose dependent rect. 19 1
812 67.81 radiation 20.0 10 < th dose dependent rect. 16 11
813 67.81 atmosphere 995.0 90 > th dose dependent rect. 12 18
817 67.82 radiation 10.0 30 < th dose independent rect. 16 11
824 67.82 temperature 30.0 10 < th dose independent rect. 12 19
826 67.82 precipitation 0.1 30 < th dose independent rect. 14 23
828 67.82 atmosphere 1005.0 10 < th dose dependent rect. 19 1
835 67.82 precipitation 0.1 30 < th dose dependent rect. 14 23
841 67.83 temperature 30.0 270 < th dose independent rect. 14 11
859 67.83 atmosphere 995.0 10 > th dose dependent rect. 13 18
861 67.84 wind 1.0 720 > th dose independent rect. 3 1
864 67.84 wind 1.0 10 > th dose independent rect. 5 8
865 67.84 humidity 90.0 10 < th dose independent rect. 12 19
908 67.85 humidity 50.0 10 > th dose independent rect. 12 19
909 67.85 atmosphere 1000.0 10 > th dose independent rect. 12 19
910 67.85 precipitation 0.1 10 < th dose independent rect. 12 19
915 67.85 temperature 25.0 30 > th dose dependent rect. 19 10
917 67.85 precipitation 0.1 10 < th dose dependent rect. 12 19
918 67.86 atmosphere 995.0 1440 > th dose independent rect. 14 1
923 67.86 wind 9.0 10 < th dose independent rect. 16 11
925 67.86 temperature 15.0 10 > th dose independent rect. 12 19
941 67.87 precipitation 0.1 720 < th dose independent rect. 2 3
943 67.87 precipitation 0.1 10 < th dose independent rect. 3 13
952 67.87 precipitation 0.1 720 < th dose dependent rect. 2 3
958 67.87 precipitation 0.1 10 < th dose dependent rect. 3 13
960 67.88 wind 9.0 30 < th dose independent rect. 13 1
963 67.88 wind 7.0 720 < th dose independent rect. 2 3
964 67.88 temperature 10.0 10 > th dose independent rect. 7 5
966 67.88 atmosphere 995.0 10 > th dose independent rect. 7 5
968 67.88 atmosphere 1015.0 10 < th dose independent rect. 7 5
970 67.88 precipitation 0.1 10 < th dose independent rect. 7 5
971 67.88 temperature 10.0 90 > th dose independent rect. 5 7
972 67.88 atmosphere 995.0 90 > th dose independent rect. 5 7
974 67.88 atmosphere 1015.0 90 < th dose independent rect. 5 7
975 67.88 precipitation 0.1 90 < th dose independent rect. 5 7
976 67.88 temperature 10.0 90 > th dose independent rect. 12 17
986 67.88 atmosphere 1015.0 720 < th dose dependent rect. 14 3
988 67.88 precipitation 0.1 10 < th dose dependent rect. 7 5
989 67.88 precipitation 0.1 90 < th dose dependent rect. 5 7
990 67.89 humidity 80.0 10 > th dose independent rect. 3 4
993 67.89 temperature 10.0 1440 > th dose independent rect. 4 11
996 67.89 temperature 10.0 10 > th dose independent rect. 16 11
997 67.89 atmosphere 995.0 10 > th dose independent rect. 16 11
998 67.89 radiation 40.0 10 < th dose independent rect. 16 11
999 67.89 temperature 10.0 10 > th dose independent rect. 3 13