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Os10g0127000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.63 (0.0286) R2 : 0.532
β1 : 1.07 (0.105) R2dD : 0.112 R2D : 0.0727
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.49 (0.0715) R2dE : 0.45 R2E : 0.41
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.278 (0.0613) R2dN8 : 0.0285 R2N8 : -0.0161
σ : 0.534
deviance : 131.56
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 4.6
memory length : 291
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 2.82
open length of G : 2.57

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
127.21 0.53 7.63 1.14 0.0624 -1.5 1.82 0.832 0.287 18.4 4.847 275 2.82 2.85
127.92 0.527 7.63 1.09 0.0144 -1.5 1.23 -- 0.276 18.6 4.8 285 2.79 2.73
130.99 0.533 7.63 1.14 0.117 -1.45 -- -0.372 0.288 14 4.895 292 2.9 2.52
131.18 0.533 7.63 1.07 0.0907 -1.45 -- -- 0.276 14.3 4.787 291 2.86 2.52
131.14 0.533 7.63 1.05 -- -1.48 -- -0.4 0.275 -- 4.9 291 2.87 2.51
181.15 0.631 7.68 1.01 1.16 -- 1.37 -- 0.167 17.9 -- -- -- --
185.76 0.638 7.68 0.998 1.17 -- -- -- 0.172 17.8 -- -- -- --
131.56 0.534 7.63 1.07 -- -1.49 -- -- 0.278 -- 4.6 291 2.82 2.57
161.45 0.592 7.65 -- 0.0968 -1.4 -- -- 0.169 14.2 5.099 291 2.93 2.48
256.61 0.749 7.66 0.962 -- -- -- -- 0.145 -- -- -- -- --
211.99 0.681 7.7 -- 1.15 -- -- -- 0.0612 17.9 -- -- -- --
161.82 0.592 7.66 -- -- -1.45 -- -- 0.154 -- 5.397 290 2.9 2.51
281.02 0.782 7.68 -- -- -- -- -- 0.0383 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 129.67 wind 5.0 270 < th dose independent rect. 3 3
3 130.46 wind 5.0 270 < th dose independent rect. 1 6
6 131.61 precipitation 0.1 270 < th dose independent rect. 3 3
7 131.61 precipitation 0.1 270 < th dose dependent rect. 3 3
11 132.04 wind 1.0 270 > th dose independent rect. 1 6
15 132.35 radiation 30.0 90 < th dose independent rect. 3 6
17 132.37 wind 9.0 270 < th dose independent rect. 6 21
22 132.61 precipitation 0.1 270 < th dose independent rect. 1 6
24 132.61 precipitation 0.1 270 < th dose dependent rect. 1 6
25 132.62 wind 1.0 270 > th dose independent rect. 2 4
26 132.66 wind 1.0 270 > th dose independent rect. 3 2
27 132.66 atmosphere 1010.0 270 < th dose independent rect. 3 3
29 132.85 temperature 10.0 270 > th dose independent rect. 3 3
31 132.85 temperature 30.0 270 < th dose independent rect. 3 3
32 132.85 humidity 50.0 270 > th dose independent rect. 3 3
35 132.85 atmosphere 995.0 270 > th dose independent rect. 3 3
37 132.85 radiation 20.0 270 < th dose independent rect. 3 3
40 132.85 temperature 10.0 270 > th dose independent rect. 6 21
41 132.95 radiation 40.0 270 < th dose dependent rect. 3 3
44 133.05 wind 9.0 270 < th dose independent rect. 7 18
63 133.43 atmosphere 995.0 90 > th dose dependent rect. 3 5
88 133.48 humidity 70.0 270 > th dose independent rect. 1 6
89 133.48 temperature 10.0 90 > th dose independent rect. 8 19
91 133.52 precipitation 0.1 90 < th dose independent rect. 8 19
92 133.52 precipitation 0.1 90 < th dose dependent rect. 8 19
98 133.58 temperature 10.0 270 > th dose independent rect. 1 6
100 133.58 temperature 30.0 270 < th dose independent rect. 1 6
101 133.58 humidity 50.0 270 > th dose independent rect. 1 6
103 133.58 atmosphere 995.0 270 > th dose independent rect. 1 6
104 133.58 atmosphere 1015.0 270 < th dose independent rect. 1 6
109 133.64 radiation 1.0 270 < th dose dependent rect. 3 2
111 133.67 precipitation 0.1 270 < th dose independent rect. 6 20
112 133.67 precipitation 0.1 270 < th dose dependent rect. 6 20
115 133.78 wind 9.0 270 < th dose dependent rect. 3 3
129 134.20 precipitation 0.1 90 < th dose independent rect. 8 7
130 134.20 precipitation 0.1 90 < th dose dependent rect. 8 7
133 134.28 radiation 40.0 90 < th dose independent rect. 13 19
139 134.60 temperature 10.0 90 > th dose independent rect. 8 7
140 134.60 atmosphere 1015.0 90 < th dose independent rect. 8 7
141 134.60 temperature 10.0 90 > th dose independent rect. 15 17
143 134.86 wind 9.0 90 < th dose dependent rect. 3 5
146 134.91 radiation 40.0 90 < th dose independent rect. 15 17
150 134.99 wind 5.0 10 < th dose independent rect. 3 6
154 135.13 wind 9.0 90 < th dose independent rect. 8 7
158 135.20 radiation 1.0 90 > th dose independent rect. 8 7
160 135.25 atmosphere 995.0 90 > th dose independent rect. 8 7
165 135.34 wind 9.0 270 < th dose independent rect. 6 7
182 135.49 temperature 10.0 270 > th dose independent rect. 6 7
183 135.49 atmosphere 995.0 270 > th dose independent rect. 6 7
184 135.49 atmosphere 1015.0 270 < th dose independent rect. 6 7
185 135.49 temperature 10.0 270 > th dose independent rect. 13 17
186 135.50 precipitation 0.1 270 < th dose independent rect. 6 7
187 135.50 precipitation 0.1 270 < th dose dependent rect. 6 7
189 135.55 precipitation 0.1 10 < th dose independent rect. 3 6
190 135.55 precipitation 0.1 10 < th dose dependent rect. 3 6
197 135.75 wind 9.0 90 < th dose independent rect. 15 17
198 135.76 atmosphere 995.0 90 > th dose independent rect. 15 17
199 135.76 temperature 30.0 270 < th dose dependent rect. 3 2
200 135.79 precipitation 0.1 270 < th dose independent rect. 13 17
201 135.79 precipitation 0.1 270 < th dose dependent rect. 13 17
204 135.86 precipitation 0.1 270 < th dose independent rect. 2 15
206 135.86 precipitation 0.1 270 < th dose dependent rect. 2 15
208 135.94 precipitation 0.1 90 < th dose independent rect. 15 17
209 135.94 precipitation 0.1 90 < th dose dependent rect. 15 17
211 135.96 atmosphere 995.0 10 > th dose dependent rect. 3 6
215 136.07 humidity 50.0 270 > th dose independent rect. 6 7
220 136.20 humidity 50.0 270 > th dose independent rect. 6 20
223 136.27 atmosphere 995.0 90 > th dose independent rect. 8 19
228 136.32 precipitation 0.1 10 < th dose independent rect. 9 18
229 136.32 precipitation 0.1 10 < th dose dependent rect. 9 18
245 136.59 wind 9.0 270 < th dose dependent rect. 1 6
247 136.60 humidity 50.0 90 > th dose independent rect. 8 19
248 136.61 humidity 50.0 270 > th dose dependent rect. 3 3
250 136.64 atmosphere 995.0 270 > th dose dependent rect. 1 6
253 136.67 radiation 1.0 10 > th dose independent rect. 9 6
254 136.70 wind 9.0 270 < th dose independent rect. 17 9
255 136.70 wind 9.0 270 < th dose independent rect. 13 17
268 136.88 wind 1.0 90 > th dose independent rect. 8 7
271 136.96 atmosphere 995.0 270 > th dose independent rect. 13 17
272 136.98 temperature 10.0 270 > th dose independent rect. 17 9
273 136.98 radiation 20.0 270 < th dose independent rect. 17 9
276 136.98 temperature 10.0 270 > th dose independent rect. 2 15
277 136.98 atmosphere 1015.0 270 < th dose independent rect. 2 15
281 137.02 temperature 10.0 10 > th dose independent rect. 4 5
283 137.02 temperature 30.0 10 < th dose independent rect. 4 5
284 137.02 humidity 50.0 10 > th dose independent rect. 4 5
286 137.02 atmosphere 995.0 10 > th dose independent rect. 4 5
287 137.02 atmosphere 1015.0 10 < th dose independent rect. 4 5
288 137.02 temperature 10.0 10 > th dose independent rect. 9 19
290 137.05 radiation 40.0 270 < th dose dependent rect. 17 9
291 137.08 temperature 10.0 10 > th dose independent rect. 9 6
293 137.08 atmosphere 995.0 10 > th dose independent rect. 9 6
294 137.08 atmosphere 1015.0 10 < th dose independent rect. 9 6
295 137.08 precipitation 0.1 10 < th dose independent rect. 9 6
296 137.08 temperature 10.0 10 > th dose independent rect. 15 18
297 137.08 precipitation 0.1 10 < th dose dependent rect. 9 6
338 137.40 wind 9.0 10 < th dose independent rect. 9 18
366 137.59 wind 1.0 270 > th dose independent rect. 13 17
371 137.62 wind 9.0 10 < th dose dependent rect. 4 5
377 137.67 wind 9.0 10 < th dose independent rect. 9 6
378 137.68 radiation 40.0 10 < th dose independent rect. 4 5
379 137.68 radiation 40.0 10 < th dose independent rect. 15 18
380 137.68 atmosphere 995.0 270 > th dose independent rect. 6 20
391 137.77 humidity 50.0 270 > th dose independent rect. 17 9
409 137.80 atmosphere 995.0 10 > th dose independent rect. 15 18
421 137.86 humidity 50.0 270 > th dose independent rect. 9 1
431 137.99 radiation 30.0 10 < th dose independent rect. 13 20
432 137.99 wind 9.0 270 < th dose dependent rect. 7 6
456 138.11 wind 9.0 10 < th dose independent rect. 15 18
460 138.13 temperature 10.0 270 > th dose independent rect. 9 1
461 138.13 atmosphere 995.0 270 > th dose independent rect. 9 1
462 138.13 atmosphere 1015.0 270 < th dose independent rect. 9 1
464 138.13 temperature 10.0 270 > th dose independent rect. 10 23
469 138.15 temperature 10.0 1440 > th dose independent rect. 10 6
472 138.15 temperature 10.0 1440 > th dose independent rect. 16 18
475 138.15 precipitation 0.1 10 < th dose independent rect. 15 18
476 138.15 temperature 10.0 270 > th dose dependent rect. 3 3
477 138.15 precipitation 0.1 10 < th dose dependent rect. 15 18
478 138.16 precipitation 0.1 270 < th dose independent rect. 9 1
480 138.16 precipitation 0.1 270 < th dose independent rect. 17 9
481 138.16 atmosphere 995.0 270 > th dose independent rect. 2 15
482 138.16 precipitation 0.1 270 < th dose dependent rect. 9 1
483 138.16 precipitation 0.1 270 < th dose dependent rect. 17 9
485 138.18 wind 9.0 270 < th dose independent rect. 9 1
563 138.62 temperature 10.0 90 > th dose dependent rect. 3 5
567 138.65 wind 1.0 270 > th dose independent rect. 9 1
574 138.69 wind 1.0 10 > th dose independent rect. 9 6
576 138.71 wind 9.0 270 < th dose independent rect. 2 15
614 138.98 atmosphere 995.0 10 > th dose independent rect. 9 19
622 139.04 radiation 1.0 270 > th dose independent rect. 9 1
634 139.13 temperature 10.0 1440 > th dose independent rect. 4 6
637 139.13 atmosphere 995.0 1440 > th dose independent rect. 4 6
638 139.13 atmosphere 1015.0 1440 < th dose independent rect. 4 6
647 139.13 temperature 10.0 1440 > th dose independent rect. 10 18
696 139.33 atmosphere 995.0 270 > th dose independent rect. 17 9
719 139.47 atmosphere 1015.0 90 < th dose independent rect. 8 19
721 139.49 temperature 10.0 90 > th dose dependent rect. 8 7
750 139.69 temperature 30.0 270 < th dose dependent rect. 2 4
760 139.79 humidity 50.0 270 > th dose dependent rect. 1 6
810 140.05 atmosphere 1015.0 90 < th dose independent rect. 15 17
820 140.12 temperature 10.0 10 > th dose dependent rect. 9 6
867 140.34 humidity 90.0 90 < th dose independent rect. 8 7
891 140.41 temperature 10.0 10 > th dose dependent rect. 3 6
936 140.70 humidity 90.0 10 < th dose independent rect. 9 6
947 140.71 wind 1.0 90 > th dose independent rect. 8 19
975 140.90 temperature 10.0 270 > th dose dependent rect. 9 1
977 140.91 atmosphere 1015.0 10 < th dose independent rect. 15 18