Os11g0202200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os11g0202200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 236.4 | 0.722 | 5.46 | 1.2 | 2.02 | -1.24 | -0.397 | -1.06 | 0.0719 | 21.6 | 28.51 | 368 | -- | -- |
| 237.13 | 0.717 | 5.48 | 1.05 | 2.01 | -1.32 | -0.363 | -- | 0.033 | 21.6 | 28.54 | 379 | -- | -- |
| 236.83 | 0.717 | 5.46 | 1.21 | 2.01 | -1.22 | -- | -1.05 | 0.0613 | 21.6 | 28.47 | 367 | -- | -- |
| 237.6 | 0.718 | 5.48 | 1.06 | 2.01 | -1.31 | -- | -- | 0.0323 | 21.6 | 28.56 | 377 | -- | -- |
| 399.83 | 0.931 | 5.47 | 0.686 | -- | -2.5 | -- | 1 | -0.158 | -- | 28.37 | 634 | -- | -- |
| 281.94 | 0.787 | 5.46 | 1.31 | 2.43 | -- | 0.121 | -- | 0.176 | 20.5 | -- | -- | -- | -- |
| 281.99 | 0.786 | 5.46 | 1.3 | 2.43 | -- | -- | -- | 0.175 | 20.5 | -- | -- | -- | -- |
| 398.98 | 0.93 | 5.45 | 0.823 | -- | -2.49 | -- | -- | -0.0869 | -- | 28.45 | 643 | -- | -- |
| 266.47 | 0.76 | 5.51 | -- | 1.97 | -1.48 | -- | -- | -0.086 | 21.8 | 28.58 | 386 | -- | -- |
| 611.53 | 1.16 | 5.39 | 1.29 | -- | -- | -- | -- | 0.152 | -- | -- | -- | -- | -- |
| 326.61 | 0.845 | 5.49 | -- | 2.42 | -- | -- | -- | 0.0306 | 20.5 | -- | -- | -- | -- |
| 416.58 | 0.951 | 5.47 | -- | -- | -2.56 | -- | -- | -0.168 | -- | 28.5 | 660 | -- | -- |
| 655.43 | 1.19 | 5.43 | -- | -- | -- | -- | -- | 0.00869 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 239.59 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 22 |
| 2 | 240.26 | temperature | 25 | 270 | > th | dose dependent | rect. | 9 | 12 |
| 14 | 241.39 | temperature | 25 | 270 | > th | dose dependent | rect. | 9 | 17 |
| 21 | 241.45 | temperature | 25 | 270 | > th | dose dependent | rect. | 9 | 20 |
| 30 | 241.63 | temperature | 25 | 270 | > th | dose dependent | sin | 22 | NA |
| 55 | 242.72 | temperature | 25 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 57 | 242.76 | temperature | 25 | 270 | > th | dose dependent | rect. | 4 | 17 |
| 131 | 243.86 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 155 | 244.46 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 158 | 244.52 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 22 |
| 159 | 244.54 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 17 |
| 164 | 244.69 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 15 |
| 180 | 245.03 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 213 | 245.85 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 10 |
| 245 | 246.42 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 2 |
| 307 | 247.15 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 18 |
| 411 | 247.92 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 13 |
| 507 | 248.50 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 23 |
| 522 | 248.55 | temperature | 30 | 270 | < th | dose independent | sin | 22 | NA |
| 548 | 248.68 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 7 |
| 564 | 248.74 | temperature | 30 | 270 | > th | dose independent | rect. | 10 | 9 |
| 579 | 248.75 | humidity | 70 | 90 | < th | dose independent | rect. | 13 | 22 |
| 694 | 249.07 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 13 |
| 697 | 249.09 | temperature | 30 | 270 | < th | dose independent | no | NA | NA |
| 723 | 249.14 | temperature | 30 | 270 | > th | dose independent | sin | 22 | NA |
| 749 | 249.23 | temperature | 30 | 720 | > th | dose independent | sin | 1 | NA |
| 814 | 249.39 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 11 |
| 867 | 249.60 | temperature | 30 | 270 | > th | dose independent | no | NA | NA |
| 983 | 249.70 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 23 |