Os10g0127900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0127900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.87 | 0.412 | 6.92 | 0.837 | 2.22 | -1.82 | 0.88 | 2.12 | 0.217 | 21.6 | 19.8 | 88 | 2.18 | -- |
| 79.66 | 0.416 | 6.96 | 0.438 | 2.08 | -2.02 | 0.545 | -- | 0.104 | 22.1 | 18.09 | 52 | 1.78 | -- |
| 79.41 | 0.415 | 6.93 | 0.726 | 2.2 | -1.85 | -- | 1.54 | 0.189 | 21.7 | 19.55 | 84 | 2.17 | -- |
| 80.61 | 0.418 | 6.95 | 0.45 | 2.02 | -2.01 | -- | -- | 0.0974 | 22 | 18.2 | 57 | 1.63 | -- |
| 109.17 | 0.487 | 6.91 | 0.408 | -- | -3.52 | -- | -0.646 | 0.00641 | -- | 7.567 | 219 | 1.82e-05 | -- |
| 135.65 | 0.546 | 7.07 | 0.127 | 2.86 | -- | 0.656 | -- | -0.275 | 20.5 | -- | -- | -- | -- |
| 137.03 | 0.548 | 7.07 | 0.106 | 2.86 | -- | -- | -- | -0.274 | 20.5 | -- | -- | -- | -- |
| 108.51 | 0.485 | 6.93 | 0.436 | -- | -3.54 | -- | -- | -0.00256 | -- | 7.124 | 223 | 2e-04 | -- |
| 85.43 | 0.43 | 6.97 | -- | 2.1 | -1.81 | -- | -- | 0.0285 | 21.7 | 18.7 | 53 | 1.67 | -- |
| 596.13 | 1.14 | 6.99 | 0.0949 | -- | -- | -- | -- | -0.301 | -- | -- | -- | -- | -- |
| 137.33 | 0.548 | 7.07 | -- | 2.86 | -- | -- | -- | -0.286 | 20.5 | -- | -- | -- | -- |
| 113.44 | 0.496 | 6.94 | -- | -- | -3.4 | -- | -- | -0.0899 | -- | 2.803 | 240 | 1.96e-05 | -- |
| 596.37 | 1.14 | 6.99 | -- | -- | -- | -- | -- | -0.312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.11 | temperature | 20 | 90 | > th | dose dependent | sin | 8 | NA |
| 4 | 78.46 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 6 | 78.62 | temperature | 30 | 90 | < th | dose dependent | sin | 8 | NA |
| 66 | 85.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 75 | 86.26 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 10 |
| 84 | 86.95 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 156 | 91.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 5 |
| 159 | 91.64 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 160 | 91.69 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 172 | 92.17 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 177 | 92.32 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 179 | 92.54 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 198 | 92.98 | temperature | 20 | 270 | > th | dose independent | rect. | 19 | 15 |
| 200 | 93.11 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 212 | 93.34 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 224 | 93.53 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 235 | 93.72 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 275 | 94.19 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 295 | 94.42 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 16 |
| 319 | 94.74 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 341 | 95.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 345 | 95.11 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 16 |
| 439 | 96.15 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 440 | 96.18 | temperature | 25 | 720 | < th | dose dependent | sin | 14 | NA |
| 447 | 96.34 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 541 | 97.10 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 566 | 97.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 14 |
| 616 | 97.57 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 625 | 97.62 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 632 | 97.66 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 779 | 98.58 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 827 | 98.78 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 835 | 98.83 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 22 |
| 933 | 99.30 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |