Os11g0202300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0202300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.87 | 0.527 | 7.42 | -3.14 | 1.35 | -1.94 | -1.14 | 2.64 | -0.796 | 21.9 | 23.65 | 1227 | -- | -- |
| 132.56 | 0.536 | 7.35 | -2.87 | 1.35 | -2.22 | -1.38 | -- | -0.716 | 22.1 | 22.64 | 2042 | -- | -- |
| 128.47 | 0.528 | 7.44 | -3.23 | 1.25 | -1.76 | -- | 3.31 | -0.847 | 21.8 | 24.52 | 999 | -- | -- |
| 139.45 | 0.55 | 7.36 | -2.93 | 1.32 | -2.17 | -- | -- | -0.725 | 21.9 | 22 | 2316 | -- | -- |
| 190.11 | 0.642 | 7.45 | -3.54 | -- | -2.65 | -- | 3.87 | -1.05 | -- | 29.1 | 784 | -- | -- |
| 198.62 | 0.661 | 7.27 | -2.1 | 1.42 | -- | -1.38 | -- | -0.31 | 22.2 | -- | -- | -- | -- |
| 206.04 | 0.672 | 7.27 | -2.04 | 1.43 | -- | -- | -- | -0.305 | 22.1 | -- | -- | -- | -- |
| 205.63 | 0.668 | 7.36 | -2.79 | -- | -2.68 | -- | -- | -0.884 | -- | 27.86 | 757 | -- | -- |
| 299.72 | 0.806 | 7.25 | -- | 1.37 | -1.07 | -- | -- | -0.231 | 22.2 | 23.6 | 429 | -- | -- |
| 330.06 | 0.849 | 7.23 | -2.02 | -- | -- | -- | -- | -0.303 | -- | -- | -- | -- | -- |
| 316 | 0.832 | 7.22 | -- | 1.42 | -- | -- | -- | -0.0776 | 22 | -- | -- | -- | -- |
| 388.35 | 0.918 | 7.25 | -- | -- | -1.63 | -- | -- | -0.363 | -- | 28.99 | 730 | -- | -- |
| 438.09 | 0.977 | 7.18 | -- | -- | -- | -- | -- | -0.0788 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.99 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 2 | 119.72 | temperature | 20 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 7 | 120.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 15 |
| 8 | 120.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 15 |
| 43 | 121.49 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 53 | 121.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 14 |
| 56 | 121.77 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 90 | 122.16 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 10 |
| 115 | 122.34 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 137 | 122.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 10 |
| 173 | 122.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 207 | 123.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 5 |
| 210 | 123.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 5 |
| 254 | 123.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 275 | 123.46 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 288 | 123.52 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 5 |
| 306 | 123.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 409 | 124.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 420 | 124.05 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 443 | 124.11 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 458 | 124.17 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 525 | 124.47 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 542 | 124.53 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 580 | 124.70 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 8 |
| 632 | 124.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 655 | 125.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 762 | 125.43 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 920 | 126.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |