Os11g0208000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0208000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.52 | 0.34 | 6.45 | 0.641 | 0.403 | -0.381 | -0.121 | -0.467 | 0.161 | 16.9 | 22.5 | 1964 | -- | -- |
| 53.08 | 0.339 | 6.46 | 0.492 | 0.39 | -0.376 | -0.122 | -- | 0.131 | 16.9 | 22.5 | 2007 | -- | -- |
| 52.54 | 0.338 | 6.45 | 0.642 | 0.404 | -0.376 | -- | -0.465 | 0.163 | 17 | 22.47 | 1931 | -- | -- |
| 53.04 | 0.339 | 6.47 | 0.476 | 0.402 | -0.381 | -- | -- | 0.119 | 17 | 22.46 | 1981 | -- | -- |
| 60.94 | 0.364 | 6.45 | 0.64 | -- | -0.404 | -- | -0.549 | 0.156 | -- | 22.1 | 1945 | -- | -- |
| 58.72 | 0.359 | 6.44 | 0.625 | 0.407 | -- | -0.0374 | -- | 0.258 | 17.2 | -- | -- | -- | -- |
| 58.72 | 0.359 | 6.44 | 0.624 | 0.407 | -- | -- | -- | 0.258 | 17.2 | -- | -- | -- | -- |
| 61.56 | 0.365 | 6.47 | 0.457 | -- | -0.387 | -- | -- | 0.11 | -- | 22.4 | 1957 | -- | -- |
| 57.33 | 0.353 | 6.48 | -- | 0.379 | -0.544 | -- | -- | 0.0328 | 17 | 21.76 | 3278 | -- | -- |
| 67.37 | 0.384 | 6.44 | 0.61 | -- | -- | -- | -- | 0.248 | -- | -- | -- | -- | -- |
| 69 | 0.389 | 6.46 | -- | 0.396 | -- | -- | -- | 0.189 | 17.2 | -- | -- | -- | -- |
| 65.75 | 0.378 | 6.48 | -- | -- | -0.567 | -- | -- | 0.0335 | -- | 21.5 | 3343 | -- | -- |
| 77.19 | 0.41 | 6.45 | -- | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.39 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 3 | 50.58 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 10 |
| 6 | 50.60 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 14 | 50.68 | temperature | 30.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 34 | 50.84 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 55 | 50.95 | temperature | 25.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 73 | 51.02 | temperature | 10.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 173 | 51.39 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 15 |
| 268 | 51.61 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 12 |
| 382 | 51.86 | temperature | 10.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 479 | 52.02 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 503 | 52.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 548 | 52.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 601 | 52.26 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 630 | 52.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 640 | 52.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 641 | 52.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 722 | 52.40 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 748 | 52.45 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 1 |