BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0526700 Os09g0526700|AK073610
(373 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2... 772 0.0
Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein 460 e-130
Os05g0595100 Similar to UDPglucose 4-epimerase-like protein 455 e-128
Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein 436 e-122
AK110765 301 4e-82
Os08g0129700 UDP-glucose 4-epimerase family protein 252 3e-67
Os04g0618200 UDP-glucose 4-epimerase family protein 242 4e-64
Os07g0139400 UDP-glucose 4-epimerase family protein 232 3e-61
Os01g0315800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35) 95 7e-20
Os03g0278200 NAD-dependent epimerase/dehydratase family pro... 94 2e-19
Os08g0526100 NAD-dependent epimerase/dehydratase family pro... 92 9e-19
Os07g0674100 UDP-glucuronic acid decarboxylase 91 1e-18
Os05g0363200 UDP-glucuronic acid decarboxylase 89 6e-18
Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35) 86 4e-17
Os09g0504000 Similar to Nucleotide sugar epimerase-like pro... 86 6e-17
Os03g0249500 Similar to Nucleotide sugar epimerase-like pro... 85 8e-17
Os01g0837300 UDP-glucuronic acid decarboxylase 83 3e-16
Os02g0791500 Similar to Nucleotide sugar epimerase-like pro... 80 3e-15
>Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)
(UDP-galactose 4-epimerase)
Length = 373
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/373 (100%), Positives = 373/373 (100%)
Query: 1 MVSGGGVAAENGEMVGNGEGRKGAGASVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHN 60
MVSGGGVAAENGEMVGNGEGRKGAGASVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHN
Sbjct: 1 MVSGGGVAAENGEMVGNGEGRKGAGASVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHN 60
Query: 61 SVPEALDRVRLIAGAALSARLDFIAGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVA 120
SVPEALDRVRLIAGAALSARLDFIAGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVA
Sbjct: 61 SVPEALDRVRLIAGAALSARLDFIAGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVA 120
Query: 121 HPQMYYENNVAGTMNLYSAMTKYGCKKIVFSSSATVYGQPEKTPCVEDSKLSALNPYGTT 180
HPQMYYENNVAGTMNLYSAMTKYGCKKIVFSSSATVYGQPEKTPCVEDSKLSALNPYGTT
Sbjct: 121 HPQMYYENNVAGTMNLYSAMTKYGCKKIVFSSSATVYGQPEKTPCVEDSKLSALNPYGTT 180
Query: 181 KLVLENYFRQVQAADPEMRVILLRYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRR 240
KLVLENYFRQVQAADPEMRVILLRYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRR
Sbjct: 181 KLVLENYFRQVQAADPEMRVILLRYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRR 240
Query: 241 PELNVYGVDYPTRDGTAIRDYIHVVDLADGHIAALEKLFATPDIGCVAYNLGTGCGTTVL 300
PELNVYGVDYPTRDGTAIRDYIHVVDLADGHIAALEKLFATPDIGCVAYNLGTGCGTTVL
Sbjct: 241 PELNVYGVDYPTRDGTAIRDYIHVVDLADGHIAALEKLFATPDIGCVAYNLGTGCGTTVL 300
Query: 301 EVVKAFEEASGKKIPIKICPRRPGDCTEVYASTDKAKKELGWSARFGIEDMCRDQWNWAK 360
EVVKAFEEASGKKIPIKICPRRPGDCTEVYASTDKAKKELGWSARFGIEDMCRDQWNWAK
Sbjct: 301 EVVKAFEEASGKKIPIKICPRRPGDCTEVYASTDKAKKELGWSARFGIEDMCRDQWNWAK 360
Query: 361 KNPYGYSANAEQN 373
KNPYGYSANAEQN
Sbjct: 361 KNPYGYSANAEQN 373
>Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein
Length = 408
Score = 460 bits (1183), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/342 (64%), Positives = 266/342 (77%), Gaps = 1/342 (0%)
Query: 27 SVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFIAG 86
+VLVTGGAGYIG+H VL+LL GF VVDN +NS A+ RV +AG S L F
Sbjct: 13 TVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDH-SRNLAFHKV 71
Query: 87 DLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYGCK 146
DL+ K +EKVFA+ R+DAV+HFAGLKAVGESV P +YY+NNV GT+NL M+ +GCK
Sbjct: 72 DLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHGCK 131
Query: 147 KIVFSSSATVYGQPEKTPCVEDSKLSALNPYGTTKLVLENYFRQVQAADPEMRVILLRYF 206
K+VFSSSA VYG P+ +PC E+ L+ NPYG TKLV+E+ R + DPE ++ILLRYF
Sbjct: 132 KLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRTDPEWKIILLRYF 191
Query: 207 NPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVDYPTRDGTAIRDYIHVVD 266
NP+GAH SG +GEDP GIPNNL+PY+QQVAVGRRP L + G DY TRDGT +RDYIHVVD
Sbjct: 192 NPVGAHPSGYLGEDPCGIPNNLMPYVQQVAVGRRPALTILGNDYATRDGTGVRDYIHVVD 251
Query: 267 LADGHIAALEKLFATPDIGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPIKICPRRPGDC 326
LADGHIAAL+KLF + IGC AYNLGTG GT+VLE+VKAFE+ASGKKIP+ I PRRPGD
Sbjct: 252 LADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKIPLIIGPRRPGDA 311
Query: 327 TEVYASTDKAKKELGWSARFGIEDMCRDQWNWAKKNPYGYSA 368
+++ KA+KEL W A+FGI++MCRDQWNWA KNPYGY +
Sbjct: 312 EILFSLPAKAEKELNWKAKFGIDEMCRDQWNWASKNPYGYGS 353
>Os05g0595100 Similar to UDPglucose 4-epimerase-like protein
Length = 354
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 216/348 (62%), Positives = 269/348 (77%), Gaps = 2/348 (0%)
Query: 27 SVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFIAG 86
++LVTGGAGYIG+HTVL+LL+ GF V V+DN N+ A+ RVR +AG + LDF
Sbjct: 8 TILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASELAILRVRELAGHN-ANNLDFRKV 66
Query: 87 DLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYGCK 146
DL+ K ++++F+++R++AVIHFAGLKAVGESV P +YY+NN+ GT+ L M +GC
Sbjct: 67 DLRDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLQVMAAHGCT 126
Query: 147 KIVFSSSATVYGQPEKTPCVEDSKLSALNPYGTTKLVLENYFRQVQAADPEMRVILLRYF 206
K+VFSSSATVYG P++ PC E+S L A+NPYG TKLV+E+ R + A+DP ++ILLRYF
Sbjct: 127 KLVFSSSATVYGWPKEVPCTEESPLCAMNPYGRTKLVIEDMCRDLHASDPNWKIILLRYF 186
Query: 207 NPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVDYPTRDGTAIRDYIHVVD 266
NP+GAH SG IGEDP GIPNNL+P++QQVAVGRRP L VYG DY T+DGT +RDYIHVVD
Sbjct: 187 NPVGAHPSGYIGEDPCGIPNNLMPFVQQVAVGRRPALTVYGTDYNTKDGTGVRDYIHVVD 246
Query: 267 LADGHIAALEKLFATPD-IGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPIKICPRRPGD 325
LADGHIAAL KL+ D IGC YNLGTG GT+VLE+V AFE+ASGKKIP+ RRPGD
Sbjct: 247 LADGHIAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGD 306
Query: 326 CTEVYASTDKAKKELGWSARFGIEDMCRDQWNWAKKNPYGYSANAEQN 373
VYA T KA+KEL W A++G+E+MCRD WNWA KNPYGY + N
Sbjct: 307 AEIVYAQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGYGSPDSSN 354
>Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein
Length = 369
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/349 (59%), Positives = 264/349 (75%), Gaps = 4/349 (1%)
Query: 27 SVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFIAG 86
+VLVTGGAGYIG+HTVL+LL GF V V D+ NS A+ RV +AG + L
Sbjct: 19 TVLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDK-ARNLSLHKV 77
Query: 87 DLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYGCK 146
D++ K +EKVF++ R+DAV+HFAGLKAVGESV P +YY++NVAGT+ L M +GCK
Sbjct: 78 DIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCK 137
Query: 147 KIVFSSSATVYGQPEKTPCVEDSKLSALNPYGTTKLVLENYFRQVQAADPEMRVILLRYF 206
K+VFSSSA VYG P+ +PC E+ L+ NPYG TKL+ E R + +D E +ILLRYF
Sbjct: 138 KLVFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLRYF 197
Query: 207 NPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVDYPTRDGTAIRDYIHVVD 266
NP+GAH SG +GEDP GIPNNL+P++QQVAVGRRP L ++G DY T+DGT +RDYIHVVD
Sbjct: 198 NPVGAHPSGYLGEDPCGIPNNLMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIHVVD 257
Query: 267 LADGHIAALEKLFATPDIGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPIKICPRRPGDC 326
LA+GHIAAL KLF + IGC AYNLGTG GT+VLE+V AFE+ SGKKIP+ I PRRPGD
Sbjct: 258 LAEGHIAALRKLFES-SIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGDA 316
Query: 327 TEVYASTDKAKKELGWSARFGIEDMCRDQWNWAKKNPYGYSA--NAEQN 373
+++S KA++E W A++GIE+MCRDQWNWA KNP+GY++ + +QN
Sbjct: 317 EILFSSAAKAEREFKWKAKYGIEEMCRDQWNWASKNPFGYASPDSTKQN 365
>AK110765
Length = 375
Score = 301 bits (772), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 173/365 (47%), Positives = 218/365 (59%), Gaps = 26/365 (7%)
Query: 28 VLVTGGAGYIGTHTVL-RLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSA------- 79
+L+ GGAGYIG+H L LL + + VTV+DN+HN+ P A R+ IA L A
Sbjct: 8 ILIPGGAGYIGSHVALVTLLTRKYRVTVLDNYHNAFPAACKRLEQIAIDELPAGASQQDK 67
Query: 80 ---RLDFIAGDLKSKDDMEKVFAAKRYD----AVIHFAGLKAVGESVAHPQMYYENNVAG 132
++D GDL+SKDD+ KVF A + D VI A LKAVGES P YY+ NV G
Sbjct: 68 DDCKVDVFKGDLRSKDDIRKVFDAYKGDDKIWGVILCAALKAVGESSEIPIDYYDVNVGG 127
Query: 133 TMNLYSAMTKYGCKKIVFSSSATVYGQPEKTPCVEDSKLSALNPYGTTKLVLENYFRQVQ 192
+NL M GC ++V+SSSATVYG P K P E ++L+ + YG TK + E R V
Sbjct: 128 LVNLLKVMHDNGCNRLVYSSSATVYGTPPKVPIPESTRLAPESVYGRTKWMSEIIIRDVC 187
Query: 193 AADPEMRVILLRYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPE--LNVYGVDY 250
A PE R I LRYFNP GAH+SG IGEDPRG P NLLP + Q+AVG+ E L V+G DY
Sbjct: 188 DAYPEFRAIGLRYFNPAGAHKSGKIGEDPRGKPGNLLPLLAQMAVGKYREGGLKVFGNDY 247
Query: 251 PTRDGTAIRDYIHVVDLADGHIAALEKL-----FATPDIGC----VAYNLGTGCGTTVLE 301
PT DGT +RDYIH+ DLA GH+ A+E L FA A+NLG G G +VL
Sbjct: 248 PTPDGTCVRDYIHIEDLAGGHVNAVEALERDDIFAADKTETHGKYRAFNLGKGVGMSVLN 307
Query: 302 VVKAFEEASGKKIPIKICPRRPGDCTEVYASTDKAKKELGWSARFGIEDMCRDQWNWAKK 361
+V A + SG + P I RR GD ++ A A+KELG+ A ++DM +D W W
Sbjct: 308 MVDAMRKVSGYEFPHTIVDRRTGDVPDLTADPSLAEKELGFKATRSLDDMAQDLWRWQSN 367
Query: 362 NPYGY 366
NP GY
Sbjct: 368 NPQGY 372
>Os08g0129700 UDP-glucose 4-epimerase family protein
Length = 406
Score = 252 bits (643), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 198/354 (55%), Gaps = 25/354 (7%)
Query: 28 VLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFIAGD 87
VLVTGGAGYIG+H LRLL+ + VT+VDN A+ ++ + RL FI D
Sbjct: 66 VLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELF--PQPGRLQFIYAD 123
Query: 88 LKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYGCKK 147
L + + K+FA +DAV+HFA + VGES P YY N + T+ + AM +G K
Sbjct: 124 LGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHGVKT 183
Query: 148 IVFSSSATVYGQPEKTPCVEDSKLSALNPYGTTKLVLENYFRQVQAADPEMRVILLRYFN 207
+++SS+ YG+PEK P VE ++ +NPYG K + E+ +M V++LRYFN
Sbjct: 184 LIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILRYFN 243
Query: 208 PIGAHRSGDIGEDPRGIPNNLLPYIQQ----------VAVGRRPELNVYGVDYPTRDGTA 257
IG+ G +GE PR P +++ A+G P L V G DYPT DGT
Sbjct: 244 VIGSDPEGRLGEAPR-------PELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTC 296
Query: 258 IRDYIHVVDLADGHIAALEKLFATPD-IGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPI 316
IRDYI V DL D H+ AL K A P +G YN+GTG G +V E V A ++A+G I I
Sbjct: 297 IRDYIDVTDLVDAHVKALNK--AEPSKVGI--YNVGTGRGRSVKEFVDACKKATGVNIKI 352
Query: 317 KICPRRPGDCTEVYASTDKAKKELGWSARF-GIEDMCRDQWNWAKKNPYGYSAN 369
+ RRPGD EVY+ K EL W+A++ +++ W W K +P GY +N
Sbjct: 353 EYLSRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYGSN 406
>Os04g0618200 UDP-glucose 4-epimerase family protein
Length = 428
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 191/353 (54%), Gaps = 26/353 (7%)
Query: 28 VLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFIAGD 87
VLVTGGAGYIG+H LRLL + VT+VDN A+ ++ + RL FI D
Sbjct: 89 VLVTGGAGYIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPE--PGRLQFIYAD 146
Query: 88 LKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYGCKK 147
L + K+F+ +DAV+HFA + VGES P YY N + T+ + AM Y K
Sbjct: 147 LGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKT 206
Query: 148 IVFSSSATVYGQPEKTPCVEDSKLSALNPYGTTKLVLENYFRQVQAADPEMRVILLRYFN 207
+++SS+ YG+P+ P E + + +NPYG K + E+ EM V++LRYFN
Sbjct: 207 LIYSSTCATYGEPDTMPITEATPQNPINPYGKAKKMAEDIILDFSKRS-EMAVMILRYFN 265
Query: 208 PIGAHRSGDIGEDPRGIPNNLLPYIQQ----------VAVGRRPELNVYGVDYPTRDGTA 257
IG+ G +GE PR P +++ A+G P L V G DYPT DGT
Sbjct: 266 VIGSDPGGRLGEAPR-------PELREHGRISGACFDAALGIIPGLKVRGTDYPTADGTC 318
Query: 258 IRDYIHVVDLADGHIAALEKLFATP-DIGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPI 316
IRDYI V DL D H+ AL+K A P +G YN+GTG G +V E V+A + A+G I +
Sbjct: 319 IRDYIDVTDLVDAHVKALDK--AQPGKVGI--YNVGTGHGRSVKEFVEACKSATGASIKV 374
Query: 317 KICPRRPGDCTEVYASTDKAKKELGWSARF-GIEDMCRDQWNWAKKNPYGYSA 368
RRPGD EVY+ K EL W+AR+ + + W W K +P GY +
Sbjct: 375 SFLTRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKAHPNGYGS 427
>Os07g0139400 UDP-glucose 4-epimerase family protein
Length = 421
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/354 (39%), Positives = 194/354 (54%), Gaps = 30/354 (8%)
Query: 28 VLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFIAGD 87
VLVTGGAGYIG+H LRLL+ F VT+VDN A+ ++ + RL FI D
Sbjct: 75 VLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLFSE--PGRLQFIYAD 132
Query: 88 LKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYGCKK 147
L + ++FA +DAV+HFA + VGES P YY N + T+ + AM + +
Sbjct: 133 LGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHNVRT 192
Query: 148 IVFSSSATVYGQPEKTPCVEDSKLSALNPYGTTKLVLENY---FRQVQAADPEMRVILLR 204
+++SS+ YG+PEK P E + +NPYG K + E+ F + + AD M V++LR
Sbjct: 193 LIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSKKAD--MAVMILR 250
Query: 205 YFNPIGAHRSGDIGEDPRGIPNNLLPYIQQ----------VAVGRRPELNVYGVDYPTRD 254
YFN IG+ G +GE P+ P +++ A+G P L V G DY T D
Sbjct: 251 YFNVIGSDPEGRLGEAPK-------PELREHGRISGACFDAALGIIPGLKVKGTDYETPD 303
Query: 255 GTAIRDYIHVVDLADGHIAALEKLFATPDIGCVA-YNLGTGCGTTVLEVVKAFEEASGKK 313
GT +RDYI V DL D H+ AL K + G V YN+GTG G +V E V+A ++A+G
Sbjct: 304 GTCVRDYIDVTDLVDAHVKALNKA----ERGKVGIYNVGTGKGRSVKEFVEACKKATGVD 359
Query: 314 IPIKICPRRPGDCTEVYASTDKAKKELGWSARF-GIEDMCRDQWNWAKKNPYGY 366
I + PRRPGD EVY+ K EL W+A+ + + R W W KK+ GY
Sbjct: 360 IKVDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGY 413
>Os01g0315800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35)
Length = 425
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 148/341 (43%), Gaps = 51/341 (14%)
Query: 20 GRKGAGASVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSA 79
G + VLVTGGAG++G+H V RL+E+G +V VVDNF R +A +
Sbjct: 107 GLRRRALRVLVTGGAGFVGSHLVDRLVERGDSVIVVDNFFTG------RKDNVAHHLANP 160
Query: 80 RLDFIAGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSA 139
R + I D+ +E D + H A + +P + NV GT+N+
Sbjct: 161 RFEVIRHDVVEPILLE-------VDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGL 213
Query: 140 MTKYGCKKIVFSSSATVYGQPEKTPCVEDSKLSALNPYG----------TTKLVLENYFR 189
+ G K + +S++ VYG P + P VE + +NP G T + + +Y R
Sbjct: 214 AKRIGA-KFLLTSTSEVYGDPLQHPQVE-TYWGNVNPIGVRSCYDEGKRTAETLTMDYHR 271
Query: 190 QVQAADPEMRVILLRYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVD 249
A+ E+R+ R FN G D D R + N ++ Q R+ L VYG
Sbjct: 272 ---GANLEVRIA--RIFNTYGPRMCID---DGRVVSN----FVAQAL--RKEPLTVYG-- 315
Query: 250 YPTRDGTAIRDYIHVVDLADGHIAALEKLFATPDIGCVAYNLGTGCGTTVLEVVKAFEEA 309
DG R + +V DL +G ++ +E P +NLG T+LE+ K ++
Sbjct: 316 ----DGKQTRSFQYVSDLVEGLMSLMEGEHIGP------FNLGNPGEFTMLELAKVVQDT 365
Query: 310 SGKKIPIKICPRRPGDCTEVYASTDKAKKELGWSARFGIED 350
I+ P D + +AK+ LGW + + +
Sbjct: 366 IDPNARIEFRPNTADDPHKRKPDITRAKELLGWEPKVPLRE 406
>Os03g0278200 NAD-dependent epimerase/dehydratase family protein
Length = 675
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 155/348 (44%), Gaps = 43/348 (12%)
Query: 27 SVLVTGGAGYIGTHTVLRLLEK--GFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFI 84
++L+TG AG+I +H RL+ + + V+D + + + + S F+
Sbjct: 8 NILITGAAGFIASHVANRLVRNYPHYKIVVLDKL-----DYCSSLSNLNPSRPSPNFKFV 62
Query: 85 AGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYG 144
GD+ S D + + + D ++HFA V S + + +NN+ GT L A G
Sbjct: 63 KGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
Query: 145 -CKKIVFSSSATVYGQPEKTPCV---EDSKLSALNPYGTTKLVLENYFRQVQAADPEMRV 200
++ + S+ VYG+ ++ V E S+L NPY TK A EM V
Sbjct: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK------------AGAEMLV 170
Query: 201 ILL--RYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVDYPTRDGTAI 258
+ Y P+ R ++ P P L+P +A+ P L ++G DG+ +
Sbjct: 171 MAYGRSYGLPVITTRGNNV-YGPNQFPEKLIPKFILLAMRGLP-LPIHG------DGSNV 222
Query: 259 RDYIHVVDLADGHIAALEKLFATPDIGCVAYNLGTGCGTTVLEVVKAFEEASG---KKIP 315
R Y++ D+A+ A E + ++G V YN+GT V++V K + G +K+
Sbjct: 223 RSYLYCEDVAE----AFEVVLHKGEVGHV-YNIGTVKERRVIDVAKDICKLFGLDTEKV- 276
Query: 316 IKICPRRPGDCTEVYASTDKAKKELGWSARFGIEDMCRDQWNWAKKNP 363
I+ RP + + Y D+ K+LGW+ R E+ + W NP
Sbjct: 277 IRFVENRPFN-DQRYFLDDQKLKKLGWAERTLWEEGLKKTIEWYTNNP 323
>Os08g0526100 NAD-dependent epimerase/dehydratase family protein
Length = 478
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 166/379 (43%), Gaps = 49/379 (12%)
Query: 2 VSGGGVAAENGEMVGNGEGRKGAGASVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNS 61
V+ GG A E E+ + R+ G SVLVTG AG++G H L L +G V +DNF++
Sbjct: 101 VAYGGAAWEK-EVRRSAAPRRDGGLSVLVTGAAGFVGAHCSLALRARGDGVVGLDNFNSY 159
Query: 62 VPEALDRV--RLIAGAALSARLDFIAGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESV 119
+L R RL+A + A LD D+ +E++F A R+ V+H A V ++
Sbjct: 160 YDPSLKRARQRLLASRGV-AVLD---ADINDAALLERLFDAARFTHVLHLAAQAGVRYAM 215
Query: 120 AHPQMYYENNVAGTMNLYSAMTKYGCKK--IVFSSSATVYGQPEKTPCVEDSKLS-ALNP 176
PQ Y +NVAG ++++ K+ + IV++SS++VYG P E+ + +
Sbjct: 216 RAPQTYVASNVAGLVSVFEVAAKHADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASL 275
Query: 177 YGTTKL---VLENYFRQVQAADPEMRVILLRYFNPIGAHRSGDIGEDPRGIPN-NLLPYI 232
Y TK + + + + + + LR+F G P G P+ +
Sbjct: 276 YAATKKAGEAIAHAYNHIYG----LSITGLRFFTVYG----------PWGRPDMAYFSFA 321
Query: 233 QQVAVGRRPELNVYGVDYPTRDGT-AIRDYIHVVDLADGHIAALEKLFATPDIGCVA--- 288
+ + G L + T DG A RD+ ++ D+ G + AL+ A G +
Sbjct: 322 RSIVAGEPITL------FRTADGADARRDFTYIDDVVKGCLGALDT--AGESTGTKSGKK 373
Query: 289 --------YNLGTGCGTTVLEVVKAFEEASGKKIPIKICPR-RPGDCTEVYASTDKAKKE 339
YNLG V +V E+ G+K ++ GD +A+ A ++
Sbjct: 374 RGPAPLRVYNLGNTSPVPVTRMVAILEKLLGRKANKRVVTMPSNGDVPFTHANVSHAARD 433
Query: 340 LGWSARFGIEDMCRDQWNW 358
G+ ++ R +W
Sbjct: 434 FGYRPATPLDAGLRRFVDW 452
>Os07g0674100 UDP-glucuronic acid decarboxylase
Length = 445
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 148/349 (42%), Gaps = 55/349 (15%)
Query: 20 GRKGAGASVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSA 79
G K G V+VTGGAG++G+H V RLL +G +V VVDN R + A +
Sbjct: 120 GLKKKGLRVVVTGGAGFVGSHLVDRLLARGDSVMVVDNLFTG------RKENVLHHAGNP 173
Query: 80 RLDFIAGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSA 139
+ I D+ +E D + H A + +P + NV GT+N+
Sbjct: 174 NFEMIRHDVVEPILLE-------VDQIYHLACPASPVHYKHNPVKTIKTNVVGTLNMLGL 226
Query: 140 MTKYGCKKIVFSSSATVYGQPEKTPCVEDSKLSALNPYG----------TTKLVLENYFR 189
+ G + + +S++ VYG P + P VE + +NP G T + + +Y R
Sbjct: 227 AKRVGA-RFLLTSTSEVYGDPLQHPQVE-TYWGNVNPIGVRSCYDEGKRTAETLTMDYHR 284
Query: 190 QVQAADPEMRVILLRYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVD 249
A+ E+R+ R FN G D D R + N ++ Q R+ L VYG
Sbjct: 285 ---GANLEVRIA--RIFNTYGPRMCID---DGRVVSN----FVAQAL--RKEPLTVYG-- 328
Query: 250 YPTRDGTAIRDYIHVVDLADGHIAALEKLFATPDIGCVAYNLGTGCGTTVLEVVKAFEEA 309
DG R + +V DL +G + +E P +NLG T+LE+ K ++
Sbjct: 329 ----DGKQTRSFQYVSDLVEGLMKLMEGEHVGP------FNLGNPGEFTMLELAKVVQDT 378
Query: 310 SGKKIPIKICPRRPGDCTEVYASTDKAKKELGWSARF----GIEDMCRD 354
I+ P D + +AK+ LGW + G+ M +D
Sbjct: 379 IDPNARIEFRPNTADDPHKRKPDISRAKELLGWEPKIPLHKGLPLMVQD 427
>Os05g0363200 UDP-glucuronic acid decarboxylase
Length = 447
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 144/340 (42%), Gaps = 51/340 (15%)
Query: 20 GRKGAGASVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSA 79
G K G VLVTGGAG++G+H V RL+E+G +V VVDN E + +
Sbjct: 119 GLKRKGLRVLVTGGAGFVGSHLVDRLVERGDSVIVVDNLFTGRKEN------VVHHFGNP 172
Query: 80 RLDFIAGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSA 139
+ I D+ +E D + H A + +P + NV GT+N+
Sbjct: 173 NFEMIRHDVVEPILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVVGTLNML-G 224
Query: 140 MTKYGCKKIVFSSSATVYGQPEKTPCVEDSKLSALNPYG----------TTKLVLENYFR 189
+ K + + +S++ VYG P + P VE + +NP G T + + +Y R
Sbjct: 225 LAKRINARFLLTSTSEVYGDPLQHPQVE-TYWGNVNPIGVRSCYDEGKRTAETLTMDYHR 283
Query: 190 QVQAADPEMRVILLRYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVD 249
A+ E+R+ R FN G D D R + N ++ Q R+ L VYG
Sbjct: 284 ---GANLEVRIA--RIFNTYGPRMCID---DGRVVSN----FVAQAL--RKEPLTVYG-- 327
Query: 250 YPTRDGTAIRDYIHVVDLADGHIAALEKLFATPDIGCVAYNLGTGCGTTVLEVVKAFEEA 309
DG R + +V DL +G + +E P +NLG T+LE+ K ++
Sbjct: 328 ----DGKQTRSFQYVSDLVEGLMRLMEGEHVGP------FNLGNPGEFTMLELAKVVQDT 377
Query: 310 SGKKIPIKICPRRPGDCTEVYASTDKAKKELGWSARFGIE 349
I+ P D + +AK+ LGW + +
Sbjct: 378 IDPNAKIEFRPNTQDDPHKRKPDIGRAKELLGWEPKIPLH 417
>Os03g0280800 UDP-glucuronic acid decarboxylase (EC 4.1.1.35)
Length = 396
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 139/340 (40%), Gaps = 51/340 (15%)
Query: 20 GRKGAGASVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSA 79
G + V+VTGGAG++G+H V LL +G +V VVDNF E +A
Sbjct: 79 GVRKPPLRVVVTGGAGFVGSHLVDELLARGDSVIVVDNFFTGRKEN------VARHLADP 132
Query: 80 RLDFIAGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSA 139
R + I D+ +E D + H A + +P + NV GT+N+
Sbjct: 133 RFELIRHDVVEPILLE-------VDQIYHLACPASPVHYKFNPIKTIKTNVMGTLNMLGL 185
Query: 140 MTKYGCKKIVFSSSATVYGQPEKTPCVEDSKLSALNPYG----------TTKLVLENYFR 189
+ G + + +S++ VYG P + P E S +NP G T + + +Y R
Sbjct: 186 AKRVGA-RFLLTSTSEVYGDPLEHPQKE-SYWGHVNPIGVRSCYDEGKRTAETLTMDYHR 243
Query: 190 QVQAADPEMRVILLRYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVD 249
A E+R+ R FN G D G R + N ++ Q R+ + VYG
Sbjct: 244 ---GAGVEVRIA--RIFNTYGPRMCLDDG---RVVSN----FVAQTL--RKQPMTVYG-- 287
Query: 250 YPTRDGTAIRDYIHVVDLADGHIAALEKLFATPDIGCVAYNLGTGCGTTVLEVVKAFEEA 309
DG R + +V DL DG I +E P +NLG T+LE+ + +E
Sbjct: 288 ----DGKQTRSFQYVSDLVDGLITLMESEHIGP------FNLGNPGEFTMLELAQVVKET 337
Query: 310 SGKKIPIKICPRRPGDCTEVYASTDKAKKELGWSARFGIE 349
++ P D KAK L W + ++
Sbjct: 338 IDPSARVEFKPNTADDPHMRKPDISKAKSLLHWEPKISLK 377
>Os09g0504000 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 498
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 153/373 (41%), Gaps = 42/373 (11%)
Query: 5 GGVAAENGEMVGNGEGRKGAGASVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPE 64
GG A E E+ + + RK G +VLVTG AG++GTH L L +G V +DNF+
Sbjct: 106 GGAAWEK-EVRRSAKPRKDGGIAVLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDP 164
Query: 65 ALDRV--RLIAGAALSARLDFIAGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHP 122
L R RL+AG + LD D+ +EK+F + V+H A V ++ P
Sbjct: 165 ELKRARQRLLAGRGVLV-LD---ADINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAP 220
Query: 123 QMYYENNVAGTMNLYSAMTKYGCKK--IVFSSSATVYGQPEKTPCVEDSKLS-ALNPYGT 179
Q Y +NVAG + + K+ + IV++SS++VYG P E+ + + Y
Sbjct: 221 QTYVASNVAGLVTVLEVAAKHADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAA 280
Query: 180 TKL---VLENYFRQVQAADPEMRVILLRYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVA 236
TK + + + + + + LR+F G P G P+ + +
Sbjct: 281 TKKAGEAIAHTYNHIYG----LSITGLRFFTVYG----------PWGRPDMAYFFFAKSI 326
Query: 237 VGRRPELNVYGVDYPTRDGTAIRDYIHVVDLADGHIAALEKLFATPDIGCV--------- 287
V P D A RD+ ++ D+ G + AL+ +
Sbjct: 327 VSGEPITLFRAAD----GADARRDFTYIDDVVKGCLGALDTSGKSTGSSKSGKKSGPAPL 382
Query: 288 -AYNLGTGCGTTVLEVVKAFEEASGKKIPIKICPRRP-GDCTEVYASTDKAKKELGWSAR 345
YNLG V +V E+ GKK +I GD +A+ A + G+
Sbjct: 383 RVYNLGNTSPVPVTRMVAILEKLLGKKANKRIVAMPSNGDVPFTHANVTHAAHDFGYRPT 442
Query: 346 FGIEDMCRDQWNW 358
++ R +W
Sbjct: 443 TSLDAGLRHFVDW 455
>Os03g0249500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 484
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 144/352 (40%), Gaps = 34/352 (9%)
Query: 23 GAGASVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSAR-- 80
G G +VLVTG AG++G H L +G V +DNF++ AL R R AAL AR
Sbjct: 116 GRGLTVLVTGAAGFVGCHAAAALRRRGDGVLGLDNFNDYYDPALKRGR----AALLARSG 171
Query: 81 LDFIAGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAM 140
+ + GD+ + + K+F + V+H A V ++ P Y NV G + L A
Sbjct: 172 VYVVDGDIADAELLAKLFDVVPFTHVLHLAAQAGVRHALVDPMSYVRANVGGFVALLEAA 231
Query: 141 TKYGCK-KIVFSSSATVYGQPEKTPCVE-DSKLSALNPYGTTKLVLE---NYFRQVQAAD 195
+ IV++SS++VYG P E D + Y TK E + + +
Sbjct: 232 RMANPQPAIVWASSSSVYGLNSHVPFSEHDRTDRPASLYAATKKAGEEIAHAYNHIYG-- 289
Query: 196 PEMRVILLRYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVDYPTRDG 255
+ + LR+F G P G P+ + + + RP T
Sbjct: 290 --LSLTALRFFTVYG----------PWGRPDMAYFFFTRDILAGRPITVYESAGGGTHQT 337
Query: 256 TAIRDYIHVVDLADGHIAALEKLFATPDIG--------CVAYNLGTGCGTTVLEVVKAFE 307
T RD+ ++ D+ G + AL+ + G YNLG V ++V E
Sbjct: 338 TISRDFTYIDDIVKGCVGALDTAGRSTGSGGKKRGPAPFRTYNLGNTSPVPVTQLVDLLE 397
Query: 308 EASGKKIPIKICPR-RPGDCTEVYASTDKAKKELGWSARFGIEDMCRDQWNW 358
+ K KI R GD +A+ A++ELG+ ++ + W
Sbjct: 398 KLLKVKAVRKIVKMPRNGDVPYTHANISLAQRELGYRPSTDLQTGVKKFVRW 449
>Os01g0837300 UDP-glucuronic acid decarboxylase
Length = 410
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 142/340 (41%), Gaps = 55/340 (16%)
Query: 29 LVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFIAGDL 88
+VTGGAG++G+H V RLLE+G +V VVDNF R +A + R + + D+
Sbjct: 104 VVTGGAGFVGSHLVDRLLEQGDSVIVVDNFFTG------RKDNVAHHLRNPRFELLRHDV 157
Query: 89 KSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYGCKKI 148
+E D + H A + +P + NV GT+N+ + G +
Sbjct: 158 VEPILLE-------VDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGA-RF 209
Query: 149 VFSSSATVYGQPEKTPCVEDSKLSALNPYG----------TTKLVLENYFRQVQAADPEM 198
+ +S++ VYG P + P E + +NP G T + + +Y R E+
Sbjct: 210 LLTSTSEVYGDPLEHPQKE-TYWGHVNPIGVRSCYDEGKRTAETLTMDYHR---GGGVEV 265
Query: 199 RVILLRYFNPIGAHRSGDIGEDPRGIPNNLLPYIQQVAVGRRPELNVYGVDYPTRDGTAI 258
R+ R FN G D D R + N ++ Q RR + VYG DG
Sbjct: 266 RIA--RIFNTYGPRMCLD---DGRVVSN----FVAQAL--RRQPMTVYG------DGKQT 308
Query: 259 RDYIHVVDLADGHIAALEKLFATPDIGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPIKI 318
R + +V DL G +A +E P +NLG T+LE+ + +E I+
Sbjct: 309 RSFQYVSDLVAGLMALMEGDHIGP------FNLGNPGEFTMLELAQVVKETIDPMATIEF 362
Query: 319 CPRRPGDCTEVYASTDKAKKELGW----SARFGIEDMCRD 354
P D KAK L W S R G+ M +D
Sbjct: 363 KPNTADDPHMRKPDITKAKHLLRWEPKVSLREGLPLMVKD 402
>Os02g0791500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 437
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 162/377 (42%), Gaps = 61/377 (16%)
Query: 23 GAGASVLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVR--LIAGAALSAR 80
GAG SVLVTG AG++GTH L L ++G V +DNF++ +L + R L+A S
Sbjct: 94 GAGMSVLVTGAAGFVGTHCSLALRKRGDGVVGIDNFNSYYDPSLKKARRSLLA----SHG 149
Query: 81 LDFIAGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAM 140
+ I GD+ + K+F + V+H A V ++ +P Y +N+AG + L A
Sbjct: 150 VFVIEGDINDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNIAGLVTLLEA- 208
Query: 141 TKYGCKK------IVFSSSATVYGQPEKTPCVE-DSKLSALNPYGTTKLV---LENYFRQ 190
CK IV++SS++VYG +K P E D + Y TK + + +
Sbjct: 209 ----CKDADPQPAIVWASSSSVYGLNDKVPFTESDRTDQPASLYAATKKAGEEITHTYNH 264
Query: 191 VQAADPEMRVILLRYFNPIGAHRSGDIGEDPRGIPN-NLLPYIQQVAVGRRPELNVYGVD 249
+ + + LR+F G P G P+ + + + G+ + VY
Sbjct: 265 IYG----LSITGLRFFTVYG----------PWGRPDMAYFSFTRNILQGK--PITVY--- 305
Query: 250 YPTRDGTAI---RDYIHVVDLADGHIAALEKLFATPDIG--------CVAYNLGTGCGTT 298
R + RD+ ++ D+ G + +L+ + G +NLG T
Sbjct: 306 ---RGKNRVDLARDFTYIDDIVKGCLGSLDTAGKSTGTGGKKRGPAPYRIFNLGNTSPVT 362
Query: 299 VLEVVKAFEE---ASGKKIPIKICPRRPGDCTEVYASTDKAKKELGWSARFGIEDMCRDQ 355
V +V E+ KK +++ GD +A+ A+++LG+ ++ +
Sbjct: 363 VPNLVSILEKHLRVKAKKNVVEMPGN--GDVPFTHANISLARQQLGYKPTTNLDVGLKKF 420
Query: 356 WNWAKKNPYGYSANAEQ 372
W YGY+ ++
Sbjct: 421 VKWYLSY-YGYTRGSKN 436
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.136 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,625,118
Number of extensions: 616976
Number of successful extensions: 2454
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 2419
Number of HSP's successfully gapped: 18
Length of query: 373
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 271
Effective length of database: 11,709,973
Effective search space: 3173402683
Effective search space used: 3173402683
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)