BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0124100 Os09g0124100|J023138I09
(164 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0124100 Ankyrin repeat containing protein 332 8e-92
Os09g0123500 Tetratricopeptide-like helical domain containi... 206 7e-54
Os09g0124800 Protein prenyltransferase domain containing pr... 115 1e-26
Os12g0600100 Tetratricopeptide-like helical domain containi... 108 2e-24
Os03g0680566 Reverse transcriptase, RNA-dependent DNA polym... 97 6e-21
Os02g0492000 Ankyrin repeat containing protein 96 9e-21
Os02g0493300 Tetratricopeptide-like helical domain containi... 92 2e-19
Os05g0103600 Similar to Ankyrin-like protein 87 4e-18
Os03g0680400 Tetratricopeptide-like helical domain containi... 87 5e-18
Os12g0599900 Tetratricopeptide region domain containing pro... 87 6e-18
Os12g0634900 Tetratricopeptide-like helical domain containi... 84 4e-17
Os12g0636100 Tetratricopeptide-like helical domain containi... 84 7e-17
Os03g0680600 82 2e-16
Os01g0171100 82 2e-16
Os03g0679800 Tetratricopeptide-like helical domain containi... 81 4e-16
Os03g0680300 79 1e-15
Os02g0492900 Similar to Ankyrin-like protein-like protein 77 4e-15
Os03g0680100 Tetratricopeptide-like helical domain containi... 75 1e-14
Os02g0494400 Tetratricopeptide-like helical domain containi... 75 2e-14
Os02g0493050 Tetratricopeptide-like helical domain containi... 74 4e-14
Os02g0494000 Tetratricopeptide region domain containing pro... 74 6e-14
Os03g0680200 Tetratricopeptide-like helical domain containi... 70 7e-13
Os01g0189100 Ubiquitin domain containing protein 68 2e-12
Os01g0175200 Tetratricopeptide-like helical domain containi... 67 6e-12
Os01g0175400 Ankyrin repeat containing protein 66 1e-11
Os08g0325400 64 4e-11
>Os09g0124100 Ankyrin repeat containing protein
Length = 164
Score = 332 bits (851), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 164/164 (100%), Positives = 164/164 (100%)
Query: 1 MFFLAGQTPLFLSSIHGRAAATRYLLDHGSNPAIDKIVLPLHGAAVKGHCEIVELFLSKG 60
MFFLAGQTPLFLSSIHGRAAATRYLLDHGSNPAIDKIVLPLHGAAVKGHCEIVELFLSKG
Sbjct: 1 MFFLAGQTPLFLSSIHGRAAATRYLLDHGSNPAIDKIVLPLHGAAVKGHCEIVELFLSKG 60
Query: 61 VDVDLYSIAGTPLLAAAISGQHSTMKILLEHHADFNTTPIEVAANHGRRDIVEMLFPLTS 120
VDVDLYSIAGTPLLAAAISGQHSTMKILLEHHADFNTTPIEVAANHGRRDIVEMLFPLTS
Sbjct: 61 VDVDLYSIAGTPLLAAAISGQHSTMKILLEHHADFNTTPIEVAANHGRRDIVEMLFPLTS 120
Query: 121 PISTLSDWSIDGIISHVENFGLKPRVFVPLSAHLQLHIIVYHHY 164
PISTLSDWSIDGIISHVENFGLKPRVFVPLSAHLQLHIIVYHHY
Sbjct: 121 PISTLSDWSIDGIISHVENFGLKPRVFVPLSAHLQLHIIVYHHY 164
>Os09g0123500 Tetratricopeptide-like helical domain containing protein
Length = 428
Score = 206 bits (523), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/216 (53%), Positives = 126/216 (58%), Gaps = 72/216 (33%)
Query: 2 FFLAGQTPLFLSSIHGRAAATRYLLDHGSNPAIDKIVLPLHGAAVKGHCEIVELFLSKGV 61
F G+TPL LSSIHGRAAATRYLLDHGS+P IDK VLP H AA KGHCEIVELFLS+GV
Sbjct: 78 FNAKGETPLCLSSIHGRAAATRYLLDHGSDPTIDKSVLPFHAAATKGHCEIVELFLSRGV 137
Query: 62 DVDLYSIAGTPLLAAAISGQHSTMKILLEHHADFN------------------------- 96
DVDL SI GTPLL AA++GQ+STMKILLEHHAD N
Sbjct: 138 DVDLDSITGTPLLTAAMNGQYSTMKILLEHHADPNRVVNHNGTPLIMSIVSGSLECVKLL 197
Query: 97 --------------TTPIEVAANHG---------------------------------RR 109
T + VAANHG RR
Sbjct: 198 IKVGADVNFRDPNGVTCVMVAANHGSPVIMKCLLDAGANSNIPDEFNRTPIEVAANRGRR 257
Query: 110 DIVEMLFPLTSPISTLSDWSIDGIISHVENFGLKPR 145
DIV+MLFPLTSPISTL DWSIDG+ISHV+ FGLKPR
Sbjct: 258 DIVKMLFPLTSPISTLPDWSIDGVISHVQTFGLKPR 293
>Os09g0124800 Protein prenyltransferase domain containing protein
Length = 439
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 100/176 (56%), Gaps = 24/176 (13%)
Query: 6 GQTPLFLSSIHGRAAATRYLLDHGSNPAI-DKIVLPLHGAAVKGHCEIVELFLSKGVDVD 64
G+TPLFLS+ GR A+TRYLLDHG++P I K PLH AA KGHCEIVEL LS+G+ +
Sbjct: 90 GETPLFLSAFFGRTASTRYLLDHGADPMIVGKSGSPLHAAAGKGHCEIVELLLSRGIGIV 149
Query: 65 LYSIAGTPLLAAAISGQHSTMKILLEHHAD------FNTTPIEVAANHGRRDIVEMLFPL 118
S+ GTPL AA GQ STMKILL+HHAD + TP+ +A + + V++L
Sbjct: 150 FDSLYGTPLHTAAAHGQCSTMKILLDHHADPDKVFNLDDTPLNMAISSKSLECVKLLIQA 209
Query: 119 TSPIS-----------TLSDWSIDGIISHVENFGLKPR------VFVPLSAHLQLH 157
+ ++ +++ GI+ + + G P VF A LQ+H
Sbjct: 210 GADVNFRDSNGATYVMMAANYGFSGIMKCLLDAGANPNIPDQFGVFPIEVAALQVH 265
>Os12g0600100 Tetratricopeptide-like helical domain containing protein
Length = 387
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 91/197 (46%), Gaps = 48/197 (24%)
Query: 6 GQTPLFLSSIHGRAAATRYLLDHGSNPAI--DKIVLPLHGAAVKGHCEIVELFLSKGVDV 63
G+TP+F ++I G YLLDHG +P ++ PLH AA GH E V L LSKGV V
Sbjct: 72 GETPVFYAAIDGNVQVLGYLLDHGGDPVKPEERGCTPLHNAAENGHDEAVRLLLSKGVHV 131
Query: 64 DLYSIAGTPLLAAAISGQHSTMKILLEHHADFNTT------------------------- 98
D + G PL AA + MK+LLEH AD N
Sbjct: 132 DPLNYRGAPLHLAASKDRVQAMKVLLEHGADPNRVVNHIFSPLMMACCGHSLKCVKLLVE 191
Query: 99 ---------------------PIEVAANHGRRDIVEMLFPLTSPISTLSDWSIDGIISHV 137
PI VAA G+R++VE+LFP T PI L DW++DGII +
Sbjct: 192 AGADVNGAGADPNIPDEEGRIPIMVAAARGQRELVEILFPRTKPIPCLPDWNVDGIIRTM 251
Query: 138 ENFGLKPRVFVPLSAHL 154
++P+ +P+ +
Sbjct: 252 RTTRIEPQSAIPVEEQV 268
>Os03g0680566 Reverse transcriptase, RNA-dependent DNA polymerase family protein
Length = 1836
Score = 96.7 bits (239), Expect = 6e-21, Method: Composition-based stats.
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 18/160 (11%)
Query: 4 LAGQTPLFLSSIHGRAAATRYLLDH--GSN--------PAIDKIVLPLHGAAVKGHCEIV 53
+A TPL ++ + R + LLDH SN P + + HG E V
Sbjct: 166 VAHGTPLHIAVFYRRIGVVKILLDHHVDSNNTSGVWGTPILTALRSAKHGLDESDSLECV 225
Query: 54 ELFLSKGVDVDLYSIAGTPLLAAAISGQHSTMKILLEHHADFNT-------TPIEVAANH 106
+L + G DV+ Y+ TPL+ A +G +K LLE HAD N TP+E++A+
Sbjct: 226 KLLVKAGADVN-YACPNTPLVVATTAGLTDCIKYLLEVHADPNIPDKQSGRTPVEISASV 284
Query: 107 GRRDIVEMLFPLTSPISTLSDWSIDGIISHVENFGLKPRV 146
GRRD VE+LFP TS IS +++W+++GII+H ++ L P++
Sbjct: 285 GRRDHVEILFPFTSSISAVTNWTVEGIIAHGKSRRLTPKI 324
>Os02g0492000 Ankyrin repeat containing protein
Length = 302
Score = 96.3 bits (238), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 87/195 (44%), Gaps = 60/195 (30%)
Query: 5 AGQTPLFLSSIHGRAAATRYLLDHGSNPAI--DKIVLPLHGAAVKGHCEIVELFLSKGVD 62
+G TPL + + G YLLDHG+NP ++ PLH A +G+CEI+++ L KG D
Sbjct: 86 SGATPLIYAVLGGIVYTVSYLLDHGANPDKPNEQGRAPLHLAVEQGNCEILKVLLVKGAD 145
Query: 63 VDLYSIAGTPLLAAAISGQHSTMKILLEHHADFNT------------------------- 97
VD S GTPL AA+ MKILL+HHAD N
Sbjct: 146 VDSSSDCGTPLHIAAVKSHDGCMKILLDHHADCNKVFSTFYTPLIAALMVRSLKCVKLLI 205
Query: 98 ------------TPIEVAANHG---------------------RRDIVEMLFPLTSPIST 124
TP+ AA G RR VE+L P+TS I +
Sbjct: 206 KAGADIKGVGTFTPLIAAATEGLTDFYKCLLEAGADPNVPDENRRKDVEILLPVTSRIPS 265
Query: 125 LSDWSIDGIISHVEN 139
+ DWS+DGII++V
Sbjct: 266 VYDWSVDGIITYVNK 280
>Os02g0493300 Tetratricopeptide-like helical domain containing protein
Length = 447
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 8/106 (7%)
Query: 6 GQTPLFLSSIHGRAAATRYLLDHGSNP--AIDKIVLPLHGAAVKGHCEIVELFLSKGVDV 63
G+TPL + A RYLLDHG++P A +K PLH AA +G+C +VEL L+KG V
Sbjct: 104 GETPLAYAVNGANVATVRYLLDHGAHPEKADNKGFTPLHFAAEEGYCNVVELLLAKGAQV 163
Query: 64 DLYSIAGTPLLAAAISGQHSTMKILLEHHADFNT------TPIEVA 103
D S+ GTPL AA +GQH +KILL+H+AD N TP+ VA
Sbjct: 164 DSMSVRGTPLHLAATNGQHRVVKILLDHNADCNKIVSAVYTPLLVA 209
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 13/142 (9%)
Query: 8 TPLFLSSIHGRAAATRYLLDHGS--NPAIDKIVLPLHGAAVKGHCEIVELFLSKGVDVD- 64
TPL L++ +G+ + LLDH + N + + PL A + V+L + G DV+
Sbjct: 171 TPLHLAATNGQHRVVKILLDHNADCNKIVSAVYTPLLVAIYGSSLKCVKLLIKAGADVNG 230
Query: 65 LYSIAGTPLLAAAISGQHSTMKILLEHHAD------FNTTPIEVAANHGRRDIVEMLFPL 118
+ +I TPL+A+ G MK LLE AD F PIE A G V +LFPL
Sbjct: 231 VGNI--TPLIASV--GSTEIMKCLLEAGADPNVPDEFGRMPIEFAVRCGTLKDVNILFPL 286
Query: 119 TSPISTLSDWSIDGIISHVENF 140
TSP+ T+ DWS+ GII HV
Sbjct: 287 TSPMPTVPDWSVRGIIRHVNTL 308
>Os05g0103600 Similar to Ankyrin-like protein
Length = 460
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 95/214 (44%), Gaps = 73/214 (34%)
Query: 6 GQTPLFLSSIHGRAAATRYLLDHGSNPAIDKIV--LPLHGAAVKGHCEIVELFLSKGVDV 63
G+TPL ++ YLL HG++P++ + PLH AA G+ ++++LFLSKGVDV
Sbjct: 89 GETPLIHATRQAHLQTVTYLLHHGADPSVASSLGATPLHHAAGIGNLDLMKLFLSKGVDV 148
Query: 64 DLYSIAGTPLLAAAISGQHSTMKILLEHHADFNT-------------------------- 97
+ S AGTPL+ AA GQ +K+LL+H A NT
Sbjct: 149 ESESDAGTPLIWAAGHGQQEAVKLLLQHDAKPNTENDDGITPLLSAVAAGSLPCLDILIQ 208
Query: 98 ------------TPIEVAANHGRRDI---------------------------------V 112
TP+ +AA+ G +I V
Sbjct: 209 AGAHPNIRAGGATPLHIAADGGNMEIINCLLKAGSDPNACDDDGLKPIQVAALRNNREVV 268
Query: 113 EMLFPLTSPISTLSDWSIDGIISHVENFGLKPRV 146
E+L PLTSPI +S WSIDGII + ++ K +V
Sbjct: 269 ELLLPLTSPIPGVSSWSIDGIIEYTKSVEEKAQV 302
>Os03g0680400 Tetratricopeptide-like helical domain containing protein
Length = 541
Score = 87.4 bits (215), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 18/160 (11%)
Query: 4 LAGQTPLFLSSIHGRAAATRYLLDHGSNPAIDKIV--LPL--------HGAAVKGHCEIV 53
+A TPL ++ G+ + LLDH ++P V P+ HG V
Sbjct: 217 VAHGTPLHIAVSFGKTGVVKILLDHHADPNNTSGVWGTPILTALHSTKHGLDESDSLGCV 276
Query: 54 ELFLSKGVDVDLYSIAGTPLLAAAISGQHSTMKILLEHHADFNT-------TPIEVAANH 106
+L + G DV+ Y+ TPL+ A G MK LL+ HAD N TPIE+AA+
Sbjct: 277 KLLVKAGADVN-YACPNTPLVVATTEGLTDCMKYLLQVHADPNIPDKQSGRTPIEIAASL 335
Query: 107 GRRDIVEMLFPLTSPISTLSDWSIDGIISHVENFGLKPRV 146
+R+ VE+LFP TSP+ +++W+++GII+H ++ P++
Sbjct: 336 RKRNHVEILFPFTSPVRAVTNWTVEGIITHGKSRCSMPKI 375
>Os12g0599900 Tetratricopeptide region domain containing protein
Length = 423
Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 88/222 (39%), Gaps = 76/222 (34%)
Query: 6 GQTPLFLSSIHGRAAATRYLLDHGSNPAIDKI--VLPLHGAAVKGHCEIVELFLSKGVDV 63
G+TP+ L++ G YLLDHG +PAI +PLH AA GH ++V L LSKGV V
Sbjct: 72 GETPILLAACDGDINVLIYLLDHGGDPAIPNAGGFMPLHYAAEYGHVDVVRLLLSKGVHV 131
Query: 64 DLYSIAGTPLLAAAISGQHSTMKILLEHHADFN--------------------------- 96
D + +G PL A + K+LLEH AD N
Sbjct: 132 DPLNYSGAPLHLATANDHDQVAKVLLEHGADPNRVVNHVLSPLVVACCSHSLKCMKLLIK 191
Query: 97 --------------TTPIEVAANHGRRDI------------------------------- 111
TTP+ +A + G DI
Sbjct: 192 AGADVNDRSSTGPRTTPLVLAVDDGSADIVKILLEAGADPNIRNEDGRIPIMMAAARGQR 251
Query: 112 --VEMLFPLTSPISTLSDWSIDGIISHVENFGLKPRVFVPLS 151
VE+LFP T PI L DWS+DGII + +P VP+
Sbjct: 252 ELVEILFPRTKPIPCLPDWSVDGIIRTMRFTRTEPEDAVPVE 293
>Os12g0634900 Tetratricopeptide-like helical domain containing protein
Length = 429
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 90/202 (44%), Gaps = 71/202 (35%)
Query: 7 QTPLFLSSIHGRAAATRYLLDHGSNP--AIDKIVLPLHGAAVKGHCEIVELFLSKGVDVD 64
+TPL + G + RYL+DHG++ + + LH AA KG EIV+L LS+G VD
Sbjct: 95 KTPLERAIAGGDLPSVRYLIDHGADIHHEREGNITFLHSAAKKGRTEIVKLLLSRGAHVD 154
Query: 65 LYSIAGTPLLAAAISGQHSTM----------------------------------KILLE 90
S GTPL AAI G ST+ K+L++
Sbjct: 155 GKSDHGTPLHFAAIKGYESTVKILLEHQADPNKVMPSSQATPLSAALFTTSLPCVKLLIQ 214
Query: 91 HHADFNTT-----------------------------------PIEVAANHGRRDIVEML 115
AD N T PIE+AA +G R+ VE+L
Sbjct: 215 AGADVNATNNPLARAAGSGLTEAIKLLLKAGANPNCPDTHGRMPIELAAVYGTREDVEIL 274
Query: 116 FPLTSPISTLSDWSIDGIISHV 137
FPLT+PI T++DWS+DG+I++
Sbjct: 275 FPLTNPIPTVADWSVDGVITYA 296
>Os12g0636100 Tetratricopeptide-like helical domain containing protein
Length = 439
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 61/96 (63%), Gaps = 5/96 (5%)
Query: 6 GQTPLFLSSIHGRAAATRYLLDHGSN----PAIDKIVLPLHGAAVKGHCEIVELFLSKGV 61
G TPL + HGR ATRYLLDHG++ + + L LH AAVKG E+ + LS+GV
Sbjct: 101 GFTPLEHAVYHGRLPATRYLLDHGADVHQIRSTGNVSL-LHSAAVKGFSEVAKFLLSRGV 159
Query: 62 DVDLYSIAGTPLLAAAISGQHSTMKILLEHHADFNT 97
+VD S GTPL AA G ST+K+LLEH+AD N
Sbjct: 160 NVDAESEMGTPLALAAFRGYDSTVKVLLEHNADPNK 195
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 14/143 (9%)
Query: 8 TPLFLSSIHGRAAATRYLLDHGSNPAIDKIV-----LPLHGAAVKGHCEIVELFLSKGVD 62
TPL L++ G + + LL+H ++P +K+ PL A V+L + G +
Sbjct: 169 TPLALAAFRGYDSTVKVLLEHNADP--NKVTNKALGAPLDLALTSSSVSCVKLLVQAGAE 226
Query: 63 VDLYSIAGTPLLAAAISGQHSTMKILLEHHADFNT------TPIEVAANHGRRDIVEMLF 116
V + L+ AA G +K +LE A+ N PIE+AA +G R+ VE+LF
Sbjct: 227 VKVEG-PNNHLVRAAEKGLTEAIKCMLEAGANPNVPDRLGRMPIELAAEYGTREDVEILF 285
Query: 117 PLTSPISTLSDWSIDGIISHVEN 139
P +S I T+++WS+DGII+HV++
Sbjct: 286 PFSSAIPTVANWSVDGIINHVQS 308
>Os03g0680600
Length = 441
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 50/188 (26%)
Query: 4 LAGQTPLFLSSIHGRAAATRYLLDHGSNPAIDKIVLPLHGAAVKGHCEIVELFLSKGVDV 63
+G PL ++ G A R + ++++ ++ GH E+ L LS+G V
Sbjct: 105 FSGIGPLQAAARLGEVDACRCM--------VEELGFDINAGRELGHDEVERLLLSRGASV 156
Query: 64 DLYSIAGTPLLAAAISGQHSTMKILLEHHADFNTT------------------------- 98
D+ GTPL AA G+ S MK+LLEH AD
Sbjct: 157 DIAYFHGTPLHIAAAYGKASVMKVLLEHDADAGADINFSDRDTPLVVAITNGLTNCIKYL 216
Query: 99 -----------------PIEVAANHGRRDIVEMLFPLTSPISTLSDWSIDGIISHVENFG 141
PI++AA++GRR VE+LFPLTSPI +S+W+++GI++H ++
Sbjct: 217 LKAGADPNIPTCHCGALPIQLAASYGRRKDVELLFPLTSPIRAVSNWTVEGILAHAKSKH 276
Query: 142 LKPRVFVP 149
+ + P
Sbjct: 277 ARSKCSKP 284
>Os01g0171100
Length = 509
Score = 82.0 bits (201), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/141 (38%), Positives = 80/141 (56%), Gaps = 10/141 (7%)
Query: 8 TPLFLSSIHGRAAATRYLLDHGSNP-AIDKIVL-PLHGAAVKGHCEIVELFLSKGVDVDL 65
T L +++ G AA LL+HG++P I IV PL + + G E ++L + G +V+
Sbjct: 227 TALHVAAARGHAAVVSVLLNHGADPNKIANIVFTPLVSSLLGGSLECMKLLIQAGANVNG 286
Query: 66 YSIAG-TPLL-AAAISGQHSTMKILLEHHADFNTT------PIEVAANHGRRDIVEMLFP 117
G TPLL A + +G +K L+E AD N PIE+AA H R+++E+L P
Sbjct: 287 AGFNGATPLLLACSRTGSIGFIKCLVESGADPNIPDELDRLPIEIAAIHAEREVIEVLLP 346
Query: 118 LTSPISTLSDWSIDGIISHVE 138
LT + TL DWS+ GII +V+
Sbjct: 347 LTHQVPTLLDWSVGGIIRYVK 367
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 5 AGQTPLFLSSIHGRAAATRYLLDHGSNPAI---DKIVLPLHGAAVKGHCEIVELFLSKGV 61
AG+TPL L++ G + YLLD G++P+ + PLH AA G E+ +L L +G
Sbjct: 158 AGETPLLLAATFGHTSTAAYLLDRGADPSTPDPNGGDTPLHWAAYNGDRELAKLLLLRGA 217
Query: 62 DVDLYSIAGTPLLAAAISGQHSTMKILLEHHADFN 96
DV + GT L AA G + + +LL H AD N
Sbjct: 218 DVGAANPRGTALHVAAARGHAAVVSVLLNHGADPN 252
>Os03g0679800 Tetratricopeptide-like helical domain containing protein
Length = 462
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 5 AGQTPLFLSSIHGRAAATRYLLDHGSNPAIDKIV--LPLHGAAVKGHCEIVELFLSKGVD 62
+G TPLF + + G+ +Y LD G++P PLH AA KGH I L LSKG
Sbjct: 156 SGMTPLFCAVLDGQEITVKYFLDKGADPNKKDAAGFAPLHEAAKKGHVGIARLLLSKGAS 215
Query: 63 VDLYSIAGTPLLAAAISGQHSTMKILLEHHADFN 96
VD+ S GTPL AA +G+ ST++ILLEH A+ N
Sbjct: 216 VDVSSSEGTPLHVAASNGKSSTVQILLEHRANPN 249
>Os03g0680300
Length = 242
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 8/93 (8%)
Query: 60 GVDVDLYSIAGTPLLAAAISGQHSTMKILLEHHADFNT-------TPIEVAANHGRRDIV 112
G DV+ Y+ TPL+ + +G +K LLE HAD N TPIE+AA+ GRRD V
Sbjct: 6 GADVN-YAYPNTPLVVSTTAGLTDCIKYLLEVHADPNIPDKQSGLTPIEIAASVGRRDHV 64
Query: 113 EMLFPLTSPISTLSDWSIDGIISHVENFGLKPR 145
E+LFP TSP+ +++W+++GII+H ++ L P+
Sbjct: 65 EILFPFTSPVRAVTNWTVEGIIAHGKSRRLIPK 97
>Os02g0492900 Similar to Ankyrin-like protein-like protein
Length = 381
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 8 TPLFLSSIHGRAAATRYLLDH--GSNPAIDKIVLPLHGAAVKGHCEIVELFLSKGVDVDL 65
TPL +++ + + LLDH N + PL A + + +L + G DV
Sbjct: 110 TPLHVAASKSQDGCMKILLDHHADCNKTFSTVCTPLIAAMMGRSLKCCKLLIEAGADVKG 169
Query: 66 YSIAGTPLLAAAISGQHSTMKILLEHHAD------FNTTPIEVAANHGRRDIVEMLFPLT 119
TPL+ AA G K LLE AD F PIE+AA RR VE+L P+T
Sbjct: 170 VGTF-TPLIVAATEGLTDFYKCLLEGGADPDVPDKFGFLPIEIAARQNRRKDVEILLPVT 228
Query: 120 SPISTLSDWSIDGIISHVEN 139
S I ++ DWS+DG+I++V
Sbjct: 229 SRIPSVHDWSVDGMITYVNK 248
>Os03g0680100 Tetratricopeptide-like helical domain containing protein
Length = 505
Score = 75.5 bits (184), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/97 (45%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 6 GQTPLFLSSIHGRAAATRYLLDHGSNPAIDKI--VLPLHGAAVKGHCEIVELFLSKGVDV 63
G TPLF + + G+ +Y LD G++P PLH AA G+ I L LSKG V
Sbjct: 199 GMTPLFCAVLDGQEITVKYFLDKGADPNKKDAEGFAPLHEAAKIGNVGIARLLLSKGASV 258
Query: 64 DLYSIAGTPLLAAAISGQHSTMKILLEHHADFNT-TP 99
D+ S GTPL AA +G+ S + ILLEHHA+ N TP
Sbjct: 259 DVSSSEGTPLHVAASNGKSSIVLILLEHHANPNVMTP 295
>Os02g0494400 Tetratricopeptide-like helical domain containing protein
Length = 371
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 6 GQTPLFLSSIHGRAAATRYLLDHGS--NPAIDKIVLPLHGAAVKGHCEIVELFLSKGVDV 63
G+T L ++++ + +YLLDHG+ N A PLH A G C V+L L+KG V
Sbjct: 82 GRTALIIATLCKHLSTVKYLLDHGADVNKASHDGRTPLHYATHLGDCGTVQLLLAKGACV 141
Query: 64 DLYSIAGTPLLAAAISGQHSTMKILLEHHADFNT------TPIEVAANHGRRDIVEMLFP 117
D + GTPL AA G+ MKILL+H+ADFN TP+ A G V +L
Sbjct: 142 DTVANRGTPLHVAASKGKDGAMKILLDHNADFNKMVDGHLTPLATAITAGELKCVNLLIE 201
Query: 118 LTSPIS 123
+ +S
Sbjct: 202 AGAVVS 207
>Os02g0493050 Tetratricopeptide-like helical domain containing protein
Length = 418
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 31 NPAIDKIVLPLHGAAVKGHCEIVELFLSKGVDVDLYSIAGTPLLAAAISGQHSTMKILLE 90
N + + PL A G + V L L G DV TPL+ AA +GQ K LLE
Sbjct: 155 NKLLKPVFTPLIMALNAGSLKCVVLLLKAGADVKGVGTV-TPLITAANNGQTDFYKCLLE 213
Query: 91 HHAD------FNTTPIEVAANHGRRDIVEMLFPLTSPISTLSDWSIDGIISHVEN 139
AD F PIE+AA + RR VE+L P+TS I ++ DWS+DG+IS+V++
Sbjct: 214 AGADPNVPDEFGHLPIELAAYNNRRKDVEILLPVTSRIPSVCDWSVDGVISYVKS 268
>Os02g0494000 Tetratricopeptide region domain containing protein
Length = 358
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 6 GQTPLFLSSIHGRAAATRYLLDHGS--NPAIDKIVLPLHGAAVKGHCEIVELFLSKGVDV 63
G+TPL ++ + + YLLD G+ N A + P+H A G C +V+L L+KG V
Sbjct: 97 GRTPLIIAIVFNHVSTVEYLLDRGADANKASHNGLTPIHFAICLGECGMVQLLLAKGACV 156
Query: 64 DLYSIAGTPLLAAAISGQHSTMKILLEHHADFNTTPIE----VAANHGRRDIVEMLFPLT 119
D + GTPL AA G+ MKILL+H+AD E A N G + L T
Sbjct: 157 DPVAYCGTPLHVAATEGRDGAMKILLDHNADVGAVVSEDRMLTAENSGSTECFNYLMEET 216
Query: 120 SPISTLSD 127
+SD
Sbjct: 217 GANCNISD 224
>Os03g0680200 Tetratricopeptide-like helical domain containing protein
Length = 472
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 6 GQTPLFLSSIHGRAAATRYLLDHGSNP-AIDKI-VLPLHGAAVKGHCEIVELFLSKGVDV 63
G TPL + G+A A RY LD G++P D I PLH A +G+ + L LSKG V
Sbjct: 111 GMTPLACAVSKGKAIAVRYFLDKGADPNKQDNIGFTPLHYATKEGYDGLARLLLSKGASV 170
Query: 64 DLYSIAGTPLLAAAISGQHSTMKILLEHHADFN 96
D+ S GT L AA S + MKILLEH+AD N
Sbjct: 171 DVISSKGTALHLAASSWKSGIMKILLEHNADPN 203
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 8/94 (8%)
Query: 51 EIVELFLSKGVDVDLYSIAGTPLLAAAISGQHSTMKILLEHHADFN-------TTPIEVA 103
+ ++L + G +++ +I TPL+ A ++ LLE A+ N TPIE+A
Sbjct: 230 KCIKLLVKAGANLN-RAIPDTPLVIATNKDFVECVEYLLEAGANANIPTNNGGKTPIEIA 288
Query: 104 ANHGRRDIVEMLFPLTSPISTLSDWSIDGIISHV 137
A GRR +VE+LFP T PI +S+W+++GII+HV
Sbjct: 289 AKSGRRKLVEILFPCTLPIKGVSNWTVEGIITHV 322
>Os01g0189100 Ubiquitin domain containing protein
Length = 531
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 8 TPLFLSSIHGRAAATRYLLDHGSNPAI---DKIVLPLHGAAVKGHCEIVELFLSKGVDVD 64
TPL ++ + + LLDH ++P + + L + V + ++L + G DV+
Sbjct: 160 TPLLHAANDDKDKTLKILLDHKADPNVIVNNGACSLLMSSLVCRSLKCMKLLIKAGADVN 219
Query: 65 LYSIAGTPLLAAAISGQHST-MKILLEHHA------DFNTTPIEVAANHGRRDIVEMLFP 117
+PL+ AA G ++ +K LL+ A D P+E AA R+ VE LFP
Sbjct: 220 GKGALVSPLMFAASQGCYTNFIKFLLKAGANPNIPDDLGWLPVEHAALRDCREDVERLFP 279
Query: 118 LTSPISTLSDWSIDGIISHVENFGLKP 144
LTSPI + +WS++GIISH + ++P
Sbjct: 280 LTSPIPNVPEWSVNGIISHAKVKDIRP 306
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 6 GQTPLFLSSIHGRAAATRYLLDHGSN--PAIDKIVLPLHGAAVKGHCEIVELFLSKGVDV 63
G TP ++ +Y LDHG + A + LH AA G C++ E LSKG+ V
Sbjct: 93 GLTPFMAAAESDDVPTVKYFLDHGGDVTKADVRGCTVLHHAAGTGCCKVTEFLLSKGIPV 152
Query: 64 DLYSIAGTPLLAAAISGQHSTMKILLEHHADFN 96
D+ GTPLL AA + T+KILL+H AD N
Sbjct: 153 DIDCGLGTPLLHAANDDKDKTLKILLDHKADPN 185
>Os01g0175200 Tetratricopeptide-like helical domain containing protein
Length = 281
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 40 PLHGAAVKGHCEIVELFLSKGVDVDLYSIAGTPLLAAAISGQHST-MKILLEHHA----- 93
PL + + + ++L + G DV+ TPL+ AA G ++ ++ LL+ A
Sbjct: 39 PLMSSLIYRSLKCMKLLIKAGADVNGKGTVVTPLMLAASQGGYTNFIQFLLKAGANPNIP 98
Query: 94 -DFNTTPIEVAANHGRRDIVEMLFPLTSPISTLSDWSIDGIISHVENFGLKP 144
D PIE AA R+ VEMLFPLTSPI + +WS++GII+H + KP
Sbjct: 99 DDLGWLPIEHAALRDCREEVEMLFPLTSPIPNVPNWSVNGIIAHAKVKNTKP 150
>Os01g0175400 Ankyrin repeat containing protein
Length = 188
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 8 TPLFLSSIHGRAAATRYLLDHGSN--PAIDKIVLPLHGAAVKGHCEIVELFLSKGVDVDL 65
TP ++ G +Y LDHG + A + LH AA G C++ E LSKG+ VD+
Sbjct: 93 TPFMAAAESGDVPTVQYFLDHGGDVTKADVRGCTVLHHAAGTGCCKVTEFLLSKGIPVDI 152
Query: 66 YSIAGTPLLAAAISGQHSTMKILLEHHADF 95
GTPL AA +G+ T+KILL+H AD+
Sbjct: 153 DCGLGTPLFHAANNGKDKTLKILLDHKADW 182
>Os08g0325400
Length = 214
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 30/162 (18%)
Query: 4 LAGQTPLFLSSIHGRAAATRYLL--------DHGSNPAIDKIVLPLHGAAV--------- 46
+ G L L++I+G RYL+ D + ++++ L G V
Sbjct: 40 MEGAGVLHLAAINGSMNVVRYLVETMRFDVDDLDKEADMLRVLVLLGGRKVWEFGSGNGA 99
Query: 47 --KGHCEIVELFLSKGVDVDLYSIAGTPLLAAAISGQHSTMKILLEHHADFNT-----TP 99
G C++V+L L+KG VD S GTPL AA GQ TMKILL+H AD+N TP
Sbjct: 100 WGGGDCKMVKLLLAKGAYVDPLSDCGTPLHLAATEGQDGTMKILLDHKADYNKMVLGMTP 159
Query: 100 IEVAANHGRRDIVEMLFPLTSPI------STLSDWSIDGIIS 135
+ VA NH ++L + I + L+D S + + +
Sbjct: 160 LFVAINHASEKCAKLLVKAGADINGDYVLTALTDTSFNSVFA 201
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.140 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,820,961
Number of extensions: 234681
Number of successful extensions: 1033
Number of sequences better than 1.0e-10: 26
Number of HSP's gapped: 956
Number of HSP's successfully gapped: 39
Length of query: 164
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 71
Effective length of database: 12,179,899
Effective search space: 864772829
Effective search space used: 864772829
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 152 (63.2 bits)