Os02g0492900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ankyrin-like protein-like protein.
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Os02g0492900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ankyrin-like protein-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.8 | 0.467 | 2.76 | 0.487 | 0.0498 | -1.72 | 0.612 | 15.7 | 0.0308 | 16.8 | 0.6304 | 95 | 3.95 | 1.1 |
| 122.16 | 0.519 | 2.82 | 0.128 | 0.00324 | -0.129 | -0.188 | -- | 0.0279 | 0.856 | 0.6304 | 95 | 3.95 | 1.1 |
| 99.59 | 0.465 | 2.76 | 0.448 | 0.0515 | -1.79 | -- | 15.9 | 0.0273 | 18.3 | 0.5748 | 99 | 4 | 1.03 |
| 119.69 | 0.51 | 2.81 | 0.116 | 0.0122 | 0.649 | -- | -- | 0.0477 | 12.9 | 5.012e-06 | 97 | 3.94 | 1.13 |
| 99.6 | 0.465 | 2.76 | 0.473 | -- | -1.94 | -- | 16 | 0.0342 | -- | 0.2864 | 100 | 3.98 | 1.03 |
| 122.23 | 0.518 | 2.81 | 0.126 | 0.000704 | -- | 0.195 | -- | 0.0293 | 13.2 | -- | -- | -- | -- |
| 122.37 | 0.518 | 2.81 | 0.134 | 0.0192 | -- | -- | -- | 0.0307 | 18.9 | -- | -- | -- | -- |
| 118.87 | 0.508 | 2.81 | 0.0854 | -- | 0.722 | -- | -- | 0.059 | -- | 0.2306 | 108 | 4.4 | 0.634 |
| 118.95 | 0.508 | 2.81 | -- | 0.0148 | 0.884 | -- | -- | 0.043 | 12 | 0.2032 | 98 | 4.33 | 0.733 |
| 122.39 | 0.517 | 2.81 | 0.133 | -- | -- | -- | -- | 0.0304 | -- | -- | -- | -- | -- |
| 122.84 | 0.518 | 2.82 | -- | 0.0178 | -- | -- | -- | 0.0158 | 19.3 | -- | -- | -- | -- |
| 109.71 | 0.488 | 2.78 | -- | -- | 2.37 | -- | -- | 0.0244 | -- | 0.6 | 79 | 4.69 | 0.333 |
| 122.86 | 0.517 | 2.82 | -- | -- | -- | -- | -- | 0.0156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.31 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 100.94 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 6 | 110.79 | humidity | 60 | 30 | < th | dose independent | rect. | 17 | 1 |
| 25 | 111.47 | humidity | 60 | 30 | < th | dose dependent | rect. | 17 | 1 |
| 245 | 112.11 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 268 | 113.89 | wind | 5 | 90 | > th | dose independent | rect. | 2 | 1 |
| 269 | 113.94 | wind | 5 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 275 | 114.17 | temperature | 20 | 90 | < th | dose independent | rect. | 4 | 16 |
| 286 | 114.46 | humidity | 50 | 10 | < th | dose independent | rect. | 11 | 1 |
| 378 | 114.46 | humidity | 50 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 485 | 114.58 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 14 |
| 499 | 114.92 | temperature | 20 | 10 | < th | dose independent | rect. | 4 | 2 |
| 501 | 114.94 | radiation | 1 | 30 | < th | dose independent | rect. | 5 | 1 |
| 508 | 115.13 | temperature | 20 | 90 | < th | dose independent | rect. | 4 | 1 |
| 515 | 115.25 | humidity | 90 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 524 | 115.34 | wind | 3 | 10 | > th | dose independent | rect. | 3 | 1 |
| 625 | 115.66 | radiation | 1 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 663 | 115.95 | temperature | 30 | 30 | > th | dose independent | rect. | 17 | 1 |
| 683 | 116.04 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 685 | 116.11 | temperature | 20 | 30 | < th | dose independent | sin | 23 | NA |
| 686 | 116.12 | temperature | 20 | 30 | > th | dose independent | sin | 23 | NA |
| 694 | 116.19 | temperature | 20 | 10 | < th | dose independent | rect. | 4 | 6 |
| 729 | 116.38 | temperature | 25 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 741 | 116.45 | radiation | 1 | 10 | > th | dose independent | rect. | 17 | 14 |
| 765 | 116.53 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 2 | 3 |
| 766 | 116.53 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 771 | 116.53 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 793 | 116.56 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 827 | 116.63 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 21 | 8 |
| 838 | 116.64 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 21 | 6 |
| 840 | 116.64 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 841 | 116.64 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 850 | 116.65 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 851 | 116.65 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 852 | 116.65 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 854 | 116.65 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 855 | 116.65 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 886 | 116.66 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 887 | 116.66 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 888 | 116.66 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 889 | 116.66 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 890 | 116.66 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 984 | 116.67 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 4 | 7 |