Os03g0680100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide-like helical domain containing protein.
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Os03g0680100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tetratricopeptide-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.76 | 0.618 | 3.15 | -1.56 | 0.446 | 1.2 | -2.23 | -14.7 | -0.0951 | 19.4 | 5.173 | 59 | 14.2 | 5.66 |
| 202.52 | 0.663 | 3.12 | -1.31 | 0.497 | 3.61 | -3.38 | -- | -0.0154 | 18.7 | 6.054 | 58 | 14.1 | 7.17 |
| 184.19 | 0.632 | 3.14 | -1.49 | 0.394 | 1.29 | -- | -15.1 | -0.0906 | 20.1 | 4.7 | 50 | 14.4 | 6.49 |
| 223.72 | 0.697 | 3.18 | -1.28 | 0.399 | 5.54 | -- | -- | -0.0322 | 18.7 | 6.393 | 58 | 14.2 | 7.05 |
| 191.44 | 0.644 | 3.14 | -1.53 | -- | 1.61 | -- | -14.4 | -0.12 | -- | 4.554 | 58 | 14.4 | 6.35 |
| 265.79 | 0.764 | 3.21 | -1.63 | 0.779 | -- | -4.58 | -- | -0.132 | 18.6 | -- | -- | -- | -- |
| 318.28 | 0.835 | 3.22 | -1.56 | 0.761 | -- | -- | -- | -0.147 | 18.8 | -- | -- | -- | -- |
| 232.13 | 0.71 | 3.17 | -1.23 | -- | 5.81 | -- | -- | -0.0751 | -- | 6.174 | 58 | 14.2 | 7.05 |
| 266.36 | 0.76 | 3.17 | -- | 0.402 | 5.95 | -- | -- | 0.0177 | 19.3 | 6.336 | 58 | 14.2 | 7.12 |
| 348.62 | 0.872 | 3.2 | -1.58 | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
| 382.55 | 0.915 | 3.18 | -- | 0.78 | -- | -- | -- | 0.0272 | 18.7 | -- | -- | -- | -- |
| 274.36 | 0.771 | 3.15 | -- | -- | 6.15 | -- | -- | 0.0587 | -- | 6.132 | 58 | 14.2 | 7.14 |
| 414.33 | 0.95 | 3.16 | -- | -- | -- | -- | -- | 0.0138 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 177.57 | wind | 5 | 90 | > th | dose dependent | rect. | 14 | 6 |
| 8 | 181.54 | wind | 7 | 270 | > th | dose independent | rect. | 14 | 1 |
| 9 | 182.14 | wind | 7 | 90 | > th | dose independent | rect. | 14 | 6 |
| 12 | 183.23 | wind | 7 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 38 | 188.52 | wind | 7 | 10 | > th | dose independent | rect. | 15 | 5 |
| 610 | 206.89 | wind | 7 | 10 | > th | dose dependent | sin | 13 | NA |
| 674 | 208.30 | wind | 5 | 30 | > th | dose dependent | sin | 15 | NA |
| 703 | 209.18 | wind | 7 | 10 | > th | dose independent | sin | 14 | NA |
| 747 | 210.21 | wind | 5 | 30 | < th | dose independent | rect. | 16 | 10 |
| 902 | 212.66 | wind | 9 | 10 | < th | dose independent | sin | 14 | NA |
| 909 | 212.71 | wind | 7 | 90 | > th | dose independent | sin | 15 | NA |
| 986 | 213.39 | wind | 7 | 270 | < th | dose independent | rect. | 7 | 15 |