Os09g0124100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os09g0124100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.48 | 0.356 | 9.81 | -0.592 | 0.38 | -0.846 | -0.104 | -1.25 | -0.466 | 21.9 | 6.98 | 7978 | -- | -- |
| 58.9 | 0.357 | 9.74 | -0.585 | 0.409 | -0.76 | -0.147 | -- | -0.336 | 21.6 | 7.026 | 10002 | -- | -- |
| 57.51 | 0.353 | 9.81 | -0.583 | 0.382 | -0.849 | -- | -1.23 | -0.468 | 21.9 | 6.958 | 7907 | -- | -- |
| 58.82 | 0.357 | 9.76 | -0.619 | 0.395 | -0.649 | -- | -- | -0.41 | 21.7 | 6.3 | 7172 | -- | -- |
| 66.2 | 0.379 | 9.8 | -0.564 | -- | -0.899 | -- | -1.34 | -0.474 | -- | 7 | 7959 | -- | -- |
| 65.73 | 0.38 | 9.75 | -0.957 | 0.404 | -- | -0.107 | -- | -0.371 | 21.9 | -- | -- | -- | -- |
| 65.77 | 0.38 | 9.75 | -0.953 | 0.405 | -- | -- | -- | -0.371 | 21.8 | -- | -- | -- | -- |
| 67.38 | 0.382 | 9.76 | -0.591 | -- | -0.737 | -- | -- | -0.432 | -- | 6 | 6525 | -- | -- |
| 64.64 | 0.374 | 9.73 | -- | 0.319 | -0.803 | -- | -- | -0.253 | 21.8 | 9 | 18289 | -- | -- |
| 75.56 | 0.406 | 9.74 | -0.949 | -- | -- | -- | -- | -0.371 | -- | -- | -- | -- | -- |
| 89.71 | 0.443 | 9.73 | -- | 0.403 | -- | -- | -- | -0.265 | 21.6 | -- | -- | -- | -- |
| 73.16 | 0.398 | 9.69 | -- | -- | -0.842 | -- | -- | -0.109 | -- | 8.223 | 47358 | -- | -- |
| 99.31 | 0.465 | 9.72 | -- | -- | -- | -- | -- | -0.266 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.26 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 2 | 54.42 | wind | 9.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 6 | 54.82 | wind | 9.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 15 | 55.31 | wind | 3.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 22 | 55.53 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 26 | 55.67 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 31 | 55.76 | wind | 7.0 | 14400 | > th | dose independent | rect. | 23 | 16 |
| 33 | 55.79 | wind | 7.0 | 14400 | > th | dose independent | rect. | 2 | 13 |
| 36 | 55.79 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 38 | 55.83 | wind | 3.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 48 | 55.93 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 50 | 55.93 | wind | 7.0 | 14400 | < th | dose independent | rect. | 23 | 16 |
| 52 | 55.93 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 18 | 21 |
| 53 | 55.94 | wind | 7.0 | 14400 | < th | dose independent | rect. | 2 | 13 |
| 56 | 55.95 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 58 | 55.96 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 20 | 19 |
| 63 | 56.02 | wind | 5.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 76 | 56.11 | wind | 9.0 | 43200 | > th | dose independent | rect. | 13 | 7 |
| 80 | 56.12 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 90 | 56.19 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 97 | 56.24 | wind | 7.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 103 | 56.27 | wind | 5.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 106 | 56.28 | wind | 9.0 | 43200 | < th | dose independent | rect. | 13 | 7 |
| 109 | 56.28 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 2 | 13 |
| 110 | 56.28 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 23 | 16 |
| 111 | 56.29 | wind | 7.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 120 | 56.30 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 11 | 8 |
| 192 | 56.53 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 209 | 56.61 | wind | 3.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 210 | 56.61 | wind | 5.0 | 14400 | > th | dose dependent | sin | 4 | NA |
| 212 | 56.62 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 217 | 56.64 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 225 | 56.66 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 4 |
| 248 | 56.69 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 271 | 56.74 | wind | 5.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 325 | 56.84 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 333 | 56.85 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 3 | 16 |
| 347 | 56.87 | wind | 7.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 357 | 56.88 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 23 | 20 |
| 370 | 56.90 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 376 | 56.90 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 392 | 56.93 | wind | 1.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 396 | 56.93 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 402 | 56.94 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 422 | 56.96 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 10 |
| 453 | 56.99 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 458 | 56.99 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 462 | 56.99 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 474 | 57.00 | radiation | 30.0 | 43200 | > th | dose dependent | rect. | 15 | 17 |
| 506 | 57.05 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 523 | 57.07 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 529 | 57.07 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 571 | 57.11 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 587 | 57.13 | wind | 9.0 | 14400 | < th | dose independent | rect. | 3 | 21 |
| 602 | 57.14 | wind | 9.0 | 14400 | < th | dose independent | rect. | 13 | 22 |
| 628 | 57.15 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 642 | 57.16 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 648 | 57.17 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 660 | 57.17 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 663 | 57.18 | wind | 1.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 670 | 57.18 | wind | 7.0 | 14400 | > th | dose dependent | no | NA | NA |
| 679 | 57.18 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 7 | 23 |
| 697 | 57.20 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 738 | 57.23 | radiation | 30.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 742 | 57.24 | wind | 9.0 | 14400 | < th | dose independent | no | NA | NA |
| 783 | 57.26 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 830 | 57.29 | wind | 9.0 | 14400 | > th | dose independent | rect. | 13 | 22 |
| 837 | 57.29 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 897 | 57.33 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 14 | 19 |
| 923 | 57.34 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 19 |
| 944 | 57.36 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 6 |
| 963 | 57.37 | wind | 9.0 | 14400 | > th | dose independent | no | NA | NA |
| 970 | 57.37 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 22 |