BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0520300 Os08g0520300|AK069912
(447 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0520300 Similar to Oligouridylate binding protein 772 0.0
Os07g0615400 Similar to Oligouridylate binding protein 453 e-127
Os04g0625800 Similar to RNA Binding Protein 45 144 1e-34
Os03g0174100 Similar to RNA Binding Protein 45 137 2e-32
Os03g0569900 Similar to RNA Binding Protein 45 136 3e-32
Os09g0462700 Similar to RNA Binding Protein 47 134 2e-31
Os04g0449900 Similar to RNA Binding Protein 47 127 1e-29
AK108879 104 2e-22
Os03g0278500 Polyadenylate binding protein, human types 1, ... 101 1e-21
Os04g0682400 RNA-binding region RNP-1 (RNA recognition moti... 100 2e-21
Os09g0565200 Similar to Nucleic acid-binding protein precursor 100 3e-21
Os02g0567900 Similar to RNA Binding Protein 47 99 7e-21
Os04g0504800 Similar to Poly(A)-binding protein 97 3e-20
Os10g0457000 RNA-binding region RNP-1 (RNA recognition moti... 96 5e-20
Os08g0314800 Similar to Poly(A)-binding protein 91 2e-18
Os08g0557100 Similar to Nucleic acid-binding protein precursor 90 3e-18
AK119744 90 4e-18
Os09g0115400 Similar to Poly(A)-binding protein 87 2e-17
Os08g0567200 RNA-binding region RNP-1 (RNA recognition moti... 86 7e-17
Os07g0158300 Similar to RNA binding protein 85 1e-16
Os03g0376600 Similar to 29 kDa ribonucleoprotein, chloropla... 83 4e-16
Os02g0622500 RNA-binding region RNP-1 (RNA recognition moti... 82 7e-16
Os07g0631900 RNA-binding region RNP-1 (RNA recognition moti... 80 3e-15
Os01g0916600 RNA-binding region RNP-1 (RNA recognition moti... 74 2e-13
Os09g0279500 Similar to Plastid-specific 30S ribosomal prot... 72 7e-13
Os02g0815200 Similar to 29 kDa ribonucleoprotein, chloropla... 72 9e-13
Os02g0221500 Paraneoplastic encephalomyelitis antigen famil... 72 1e-12
Os04g0591000 RNA-binding region RNP-1 (RNA recognition moti... 70 3e-12
AK120313 69 7e-12
Os07g0516900 Similar to RNA Binding Protein 45 68 1e-11
>Os08g0520300 Similar to Oligouridylate binding protein
Length = 447
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/447 (84%), Positives = 379/447 (84%)
Query: 1 MNGAGGNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVLXXXXXXXMTQMEPISN 60
MNGAGGNH SGVL MTQMEPISN
Sbjct: 1 MNGAGGNHQQQQQQQQRLRQQQQQQALLMQQALQQQQQYQSGVLAAAAAAAMTQMEPISN 60
Query: 61 GNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDR 120
GNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDR
Sbjct: 61 GNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDR 120
Query: 121 RSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 180
RSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA
Sbjct: 121 RSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA 180
Query: 181 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAE 240
YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAE
Sbjct: 181 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAE 240
Query: 241 EKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHR 300
EKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHR
Sbjct: 241 EKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHR 300
Query: 301 HFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGNXXXXX 360
HFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGN
Sbjct: 301 HFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGNKPTPP 360
Query: 361 XXXXXXXXXXXXSYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQIAGQHGLAGQVXX 420
SYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQIAGQHGLAGQV
Sbjct: 361 GTSSKPLPPPLPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQIAGQHGLAGQVSA 420
Query: 421 XXXXXXXXXXYDGYPNQSSAQQLMYYN 447
YDGYPNQSSAQQLMYYN
Sbjct: 421 GLLAAGSQALYDGYPNQSSAQQLMYYN 447
>Os07g0615400 Similar to Oligouridylate binding protein
Length = 427
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/406 (58%), Positives = 279/406 (68%), Gaps = 37/406 (9%)
Query: 54 QMEPISNGNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFG 113
Q+EPI GNLPPGFD STCRSVYVGNVH VTE+LL EVFQS+GLVE CKLIRKEKSS+G
Sbjct: 46 QIEPILTGNLPPGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYG 105
Query: 114 FVDYYDRRSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 173
FVDYYDRRSAAL+I+TL+G+ I GQ I+VNWAYAS QREDT+ HF+IFVGDLS EV D+
Sbjct: 106 FVDYYDRRSAALSILTLNGKQIFGQLIRVNWAYASGQREDTTDHFNIFVGDLSPEVTDSA 165
Query: 174 LYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 233
L+A FS Y SCSDARVMWD KTGRSRGYGFVSFRNQQ+A++AI ++ G+WLGSRQIRCNW
Sbjct: 166 LFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNW 225
Query: 234 ATKNNAE-EKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHE 292
ATK + E+Q +D+ N LTN + + +A++D PENNP TVYVGNL HE
Sbjct: 226 ATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDA-----PENNPQYRTVYVGNLAHE 280
Query: 293 VNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCS 352
V +D LHR F+ LG GAIEEVR+Q KGFGFVRYSNH EAALAIQM NG ++ GKPIKCS
Sbjct: 281 VTQDVLHRLFHALGAGAIEEVRIQLGKGFGFVRYSNHAEAALAIQMGNGRILGGKPIKCS 340
Query: 353 WGNXXXXXXXXXXXXXXXXXSYQPVP--------MAGVPQGFSAADIVAYQRQLTLSQVA 404
WGN +P P +AAD++ YQR L LS++
Sbjct: 341 WGN-------------------KPTPPGTTSAPLPPPAAPSVTAADLLEYQRSLALSKMV 381
Query: 405 AGQIAGQHGLAGQVXXXXXXXX--XXXXYDG-YPNQS-SAQQLMYY 446
+ Q Q + YD +PN S QQLMYY
Sbjct: 382 SSQALMQAQAQQHLKQAMGMGAGVSQAMYDASFPNVGPSQQQLMYY 427
>Os04g0625800 Similar to RNA Binding Protein 45
Length = 425
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 147/290 (50%), Gaps = 31/290 (10%)
Query: 72 CRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAALAI 127
+++++G++ P + ES + F ++G V+ KLIR ++S +GFV++ R +A +
Sbjct: 89 VKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRIL 148
Query: 128 MTLHGRHI--CGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA-YPSC 184
T +G+ + ++NWA A +R+DT + IFVGDL+++V D L F YPS
Sbjct: 149 QTYNGQMMPNVEMVFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPSV 207
Query: 185 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAEEKQE 244
A+V+ D T RS+GYGFV F + E A+TEM G SR +R A K+
Sbjct: 208 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRI-----GPAANKKT 262
Query: 245 TDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYN 304
T V G+ S EN+P+ TT++VG L V D L + F
Sbjct: 263 TGVQERVPNAQGAQS----------------ENDPNNTTIFVGGLDPNVTEDVLKQVF-- 304
Query: 305 LGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWG 354
G + V++ K GFV+Y N A A+ + G ++ G+ ++ SWG
Sbjct: 305 APYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWG 354
>Os03g0174100 Similar to RNA Binding Protein 45
Length = 416
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 149/292 (51%), Gaps = 18/292 (6%)
Query: 72 CRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAALAI 127
R++++G++ E+ L F +G ++ K+IR + +S +GF+++ A +
Sbjct: 15 VRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVL 74
Query: 128 MTLHGRHICG--QAIKVNWA-YASTQREDTSGHFH-IFVGDLSSEVNDATLYACFS-AYP 182
T +G + G ++NWA ++S +R +G H IFVGDL+ +V D L F +YP
Sbjct: 75 QTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYP 134
Query: 183 SCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAEEK 242
S A+V+ D TGRS+GYGFV F ++ E A+TEM G + +R +R + A
Sbjct: 135 SVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGS 194
Query: 243 QETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHF 302
Q + + P ++ P+++P TT+++GNL V DEL +
Sbjct: 195 QLQYGAAKAMYPAAGYAVPQVQPVL-------PDSDPTNTTIFIGNLDQNVTEDELRQ-- 245
Query: 303 YNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWG 354
+ G + V++ +K GFV+Y++ A A+Q +G + + ++ SWG
Sbjct: 246 ICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWG 297
>Os03g0569900 Similar to RNA Binding Protein 45
Length = 402
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 150/294 (51%), Gaps = 32/294 (10%)
Query: 72 CRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAALAI 127
R++++G++ + E+ L F +G + K+IR +++ +GF+++ A +
Sbjct: 66 VRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVL 125
Query: 128 MTLHGRHICG--QAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA-YP 182
+G+ + Q K+NWA A +R D + IFVGDL+S+V D L F A Y
Sbjct: 126 QGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQ 185
Query: 183 SCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT--KNNAE 240
S A+V++D TGRS+GYGFV F + E A+TEM G++ SR +R A+ KN
Sbjct: 186 SVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGG 245
Query: 241 EKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHR 300
++Q + + + +Q T S +P N TTV+VG L V + L +
Sbjct: 246 QQQPSATY---------------QNTQGTDSDSDPNN----TTVFVGGLDPSVTDEVLKQ 286
Query: 301 HFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWG 354
F G + V++ K GFV+YSN A AI+M NG + G+ I+ SWG
Sbjct: 287 AFSPY--GELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWG 338
>Os09g0462700 Similar to RNA Binding Protein 47
Length = 441
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 148/302 (49%), Gaps = 36/302 (11%)
Query: 63 LPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYY 118
+P G ++++VG++H + E+ L F +G V K+IR +++ +GFV++Y
Sbjct: 105 VPRGGGQEENKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFY 164
Query: 119 DRRSAALAIMTLHGRHI---CGQAIKVNWAYAST--QREDTSGHFHIFVGDLSSEVNDAT 173
+A + G HI Q ++NWA S +R D + IFVGDL+S+VND T
Sbjct: 165 SHAAAEKVLEGFAG-HIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTT 223
Query: 174 LYACFSA-YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCN 232
L FS Y S A+V+ D TGRS+GYGFV F + E A+TEM G + +R +R
Sbjct: 224 LLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIG 283
Query: 233 WATKNNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHE 292
AT T+G+S G A D G N TTV+VG L
Sbjct: 284 PATPRK---------------TSGTSGPTGSAARSD-GDLTN-------TTVFVGGLDPN 320
Query: 293 VNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCS 352
V+ D+L + F G I V++ K GFV++ A A+Q NG + + ++ S
Sbjct: 321 VSEDDLRQTFSQY--GEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQTVRLS 378
Query: 353 WG 354
WG
Sbjct: 379 WG 380
>Os04g0449900 Similar to RNA Binding Protein 47
Length = 387
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 145/293 (49%), Gaps = 39/293 (13%)
Query: 73 RSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAALAIM 128
++++VG++ + E+ L F SG V K+IR ++ +GFV++Y SA A+
Sbjct: 65 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQ 124
Query: 129 TLHGRHI--CGQAIKVNWAYAST--QREDTSGHFHIFVGDLSSEVNDATLYACFS-AYPS 183
G + + K+NWA S +R + + + IFVGDL+++V D L F+ Y S
Sbjct: 125 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANKYRS 184
Query: 184 CSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK--NNAEE 241
A+V+ D TGRSRGYGFV F + + A+TEM G + +R IR AT ++ +
Sbjct: 185 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGPATPRRSSGDS 244
Query: 242 KQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRH 301
T H ++G S+N TVYVG L V+ DEL +
Sbjct: 245 GSSTPGH-----SDGDSTN---------------------RTVYVGGLDPNVSEDELRKA 278
Query: 302 FYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWG 354
F G + V++ K GFV++ + +A A+Q NG V+ + ++ SWG
Sbjct: 279 FAKY--GDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWG 329
>AK108879
Length = 670
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 136/299 (45%), Gaps = 40/299 (13%)
Query: 68 DPSTCRS----VYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS---FGFVDYYDR 120
DP+ RS +++ N+ + L + F + G + CK++ ++ + FGFV Y R
Sbjct: 123 DPALRRSGVGNIFIKNLDKTIDNKALHDTFSAFGNILSCKVVTDDQGASRGFGFVHYETR 182
Query: 121 RSAALAIMTLHGRHICGQAIKVNWAYASTQR----EDTSGHF-HIFVGDLSSEVNDATLY 175
+A LAI ++G + G + V + +R E+ F ++F+ +L V D L
Sbjct: 183 EAADLAIDKVNGMLLNGIKVFVGHHISRKERISHLEELKAQFTNVFIKNLDEAVTDEELQ 242
Query: 176 ACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 235
A F + A ++ +++G+SRG+GF++F ++A+ A+ + + ++I A
Sbjct: 243 ALFEPFGEIQSA-ILQRDESGKSRGFGFINFVEHEDAQKAVEALNDVEVNGKRIFVGRAQ 301
Query: 236 KNNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNR 295
K + ++ A+ L S + +YV NL V
Sbjct: 302 KKSERTEELRRQFEALKLERMSKFH--------------------GVNLYVKNLDEMVTE 341
Query: 296 DELHRHFYNLGVGAIEEVRVQQD-----KGFGFVRYSNHGEAALAIQMANGLVVRGKPI 349
D+L F G +I +RV D +GFGFV +S EAA AI NG +V GKP+
Sbjct: 342 DQLRMEFTPFG--SISSLRVMVDEKGVSRGFGFVCFSAPEEAARAISEMNGRMVNGKPL 398
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 49/287 (17%)
Query: 75 VYVGNVHPNVTESLLIEVFQSSGLVERCKLIR----KEKSSFGFVDYYDRRSAALAIMTL 130
+YVG +HP+VTE++L E+F G V ++ R + + +V+++ AI +L
Sbjct: 46 LYVGELHPDVTEAMLYEIFSQIGPVSSIRVCRDAITRRSLGYAYVNFHSPADCERAIESL 105
Query: 131 HGRHICGQAIKVNWAYASTQREDT---SGHFHIFVGDLSSEVNDATLYACFSAYPSCSDA 187
+ I GQ ++ W +QR+ SG +IF+ +L +++ L+ FSA+ +
Sbjct: 106 NYALIKGQPCRLMW----SQRDPALRRSGVGNIFIKNLDKTIDNKALHDTFSAFGNILSC 161
Query: 188 RVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAEEKQETDN 247
+V+ D++ G SRG+GFV + ++ A+ AI ++ G
Sbjct: 162 KVVTDDQ-GASRGFGFVHYETREAADLAIDKVNG-------------------------- 194
Query: 248 HNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYNLGV 307
+L NG G S+ E T V++ NL V +EL F
Sbjct: 195 ----MLLNGIKVFVGHHISRKERISHLEELKAQFTNVFIKNLDEAVTDEELQALFEPF-- 248
Query: 308 GAIEEVRVQQD-----KGFGFVRYSNHGEAALAIQMANGLVVRGKPI 349
G I+ +Q+D +GFGF+ + H +A A++ N + V GK I
Sbjct: 249 GEIQSAILQRDESGKSRGFGFINFVEHEDAQKAVEALNDVEVNGKRI 295
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 19/187 (10%)
Query: 75 VYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS---FGFVDYYDRRSAALAIMTLH 131
V++ N+ VT+ L +F+ G ++ L R E FGF+++ + A A+ L+
Sbjct: 227 VFIKNLDEAVTDEELQALFEPFGEIQSAILQRDESGKSRGFGFINFVEHEDAQKAVEALN 286
Query: 132 GRHICGQAIKVNWAYASTQREDT------------SGHFH---IFVGDLSSEVNDATLYA 176
+ G+ I V A ++R + FH ++V +L V + L
Sbjct: 287 DVEVNGKRIFVGRAQKKSERTEELRRQFEALKLERMSKFHGVNLYVKNLDEMVTEDQLRM 346
Query: 177 CFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 236
F+ + S S RVM D K G SRG+GFV F +EA AI+EM G+ + + + A +
Sbjct: 347 EFTPFGSISSLRVMVDEK-GVSRGFGFVCFSAPEEAARAISEMNGRMVNGKPLYVALAQR 405
Query: 237 NNAEEKQ 243
+ Q
Sbjct: 406 RDERRAQ 412
>Os03g0278500 Polyadenylate binding protein, human types 1, 2, 3, 4 family
protein
Length = 647
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 135/302 (44%), Gaps = 49/302 (16%)
Query: 68 DPSTCRS----VYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS---FGFVDYYDR 120
DP RS V+V N++ V L E+F G + CK+ + E + +GFV + +
Sbjct: 117 DPDARRSGVGNVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQ 176
Query: 121 RSAALAIMTLHGRHICGQAIKVNWAYASTQRE--DTSGHFHIFVGDLSSEVNDATLYACF 178
SA +I L+ H CG+ + V ++R + + ++++ +L ++ + + F
Sbjct: 177 ESADASIQNLNNSHFCGRQLHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELIKLKF 236
Query: 179 SAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNN 238
S Y ++M + G S+G+GFVSF+N + A+ A M G LGS+ + A K
Sbjct: 237 SQYGLVISVKIMKRDD-GTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVARAQK-K 294
Query: 239 AEEKQ------ETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHE 292
AE KQ E + + +NGS+ VY+ N+ E
Sbjct: 295 AERKQYLQRLHEEKRNEIITKSNGSN-------------------------VYIKNINDE 329
Query: 293 VNRDELHRHFYNLGVGAIEEVRVQQD-----KGFGFVRYSNHGEAALAIQMANGLVVRGK 347
V D L F G I ++ +D KGFGFV Y+ EA A+ G++ GK
Sbjct: 330 VGDDALRERFNEF--GNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVMFYGK 387
Query: 348 PI 349
P+
Sbjct: 388 PL 389
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 128/289 (44%), Gaps = 46/289 (15%)
Query: 70 STCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAAL 125
+T ++YVG++H +V E L+EVF G + ++ R +S +G+V+Y + AA+
Sbjct: 35 ATVPALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAI 94
Query: 126 AIMTLHGRHICGQAIKVNWAYASTQREDT--SGHFHIFVGDLSSEVNDATLYACFSAYPS 183
A+ L+ I + I+V W S + D SG ++FV +L+ V++ +L F +
Sbjct: 95 ALEKLNHSLILDKPIRVMW---SNRDPDARRSGVGNVFVKNLNDLVDNVSLQELFCKFGD 151
Query: 184 CSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAEEKQ 243
+V N+ G SRGYGFV F Q+ A+ +I + RQ+ K
Sbjct: 152 ILSCKV-AKNEDGTSRGYGFVQFALQESADASIQNLNNSHFCGRQLHVATFIKK------ 204
Query: 244 ETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFY 303
S+ + N+ T +Y+ NL ++ + + F
Sbjct: 205 ---------------------------SERSTNNDDKYTNLYMKNLDDDITEELIKLKFS 237
Query: 304 NLGVGAIEEVRVQQD---KGFGFVRYSNHGEAALAIQMANGLVVRGKPI 349
G+ ++ + D KGFGFV + N A A + NG+++ K +
Sbjct: 238 QYGLVISVKIMKRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTL 286
>Os04g0682400 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 1008
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 133/296 (44%), Gaps = 39/296 (13%)
Query: 75 VYVGNVHPNVTESLLIEVFQSSGLVERCKLIRK----EKSSFGFVDYYDRRSAALAIMTL 130
+YVGN+ +V LIE+F G + R +++ +GFV Y D R A+ AI +
Sbjct: 295 LYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRM 354
Query: 131 HGRHICGQAIKVNWA------YASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSC 184
+GR + G A+KV S Q + ++V +LS +N L F +
Sbjct: 355 NGRLVEGTALKVRVTGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPFGEV 414
Query: 185 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA-----TKNNA 239
++A+V D+ TG S+GYGFV + + A A+ + G+ + R+I + N+A
Sbjct: 415 TNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLPNSA 474
Query: 240 EEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELH 299
E T ++AV ++ S D + +YV N+ ++ +L
Sbjct: 475 VESPSTTRNSAV----------------ESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLV 518
Query: 300 RHFYNLGVGAIEEVRVQQD------KGFGFVRYSNHGEAALAIQMANGLVVRGKPI 349
F L G I RV D KG+GF+++++ A AI NG +V G+ I
Sbjct: 519 ELF--LPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMI 572
>Os09g0565200 Similar to Nucleic acid-binding protein precursor
Length = 322
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 9/179 (5%)
Query: 68 DPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSA 123
+P VYVGN+ ++ L ++F+ +G+VE ++I ++ FGFV A
Sbjct: 138 EPPEEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEA 197
Query: 124 ALAIMTLHGRHICGQAIKVNWAYASTQREDTSGH-----FHIFVGDLSSEVNDATLYACF 178
A+ H + G+ + VN A R + F I+VG+L +V+D+ L F
Sbjct: 198 EKAVEMFHRYDVDGRLLTVNKAAPRGARVERPPRQFGPSFRIYVGNLPWQVDDSRLVQLF 257
Query: 179 SAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKN 237
S + DARV++D +TGRSRG+GFV+ Q+E + AI + G+ L R +R N A +
Sbjct: 258 SEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRALRVNVAEER 316
>Os02g0567900 Similar to RNA Binding Protein 47
Length = 257
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 102/220 (46%), Gaps = 29/220 (13%)
Query: 138 QAIKVNWAYAST--QREDTSGHFHIFVGDLSSEVNDATLYACFSA-YPSCSDARVMWDNK 194
+A K+NWA S +R + + IFVGDL+ +V D L F+ Y S A+V+ D
Sbjct: 6 RAFKLNWASYSMGEKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDAN 65
Query: 195 TGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAEEKQETDNHNAVVLT 254
TGRSRGYGFV F + + A+TEM G + +R IR AT + + +
Sbjct: 66 TGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPPRQ---S 122
Query: 255 NGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVR 314
+ S+N T+YVG L DEL + F G + V+
Sbjct: 123 DSDSTN---------------------RTIYVGGLDPNATEDELRKAFAKY--GDLASVK 159
Query: 315 VQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWG 354
+ K GFV++ N +A A+Q NG + + ++ SWG
Sbjct: 160 IPVGKQCGFVQFVNRPDAEEALQGLNGSTIGKQAVRLSWG 199
>Os04g0504800 Similar to Poly(A)-binding protein
Length = 659
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 38/302 (12%)
Query: 68 DPSTCRS----VYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKE---KSSFGFVDYYDR 120
DPS+ RS +++ N+ + L + F + G + CK+ E FGFV Y
Sbjct: 118 DPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKG 177
Query: 121 RSAALAIMTLHGRHICGQAIKVNWAYASTQRE---DTSGHFHIFVGDLSSEVNDATLYAC 177
+A AI +L+G I + + V +RE D + ++FV +LS L
Sbjct: 178 EAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNNVFVKNLSESTTKEDLVKI 237
Query: 178 FSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKN 237
F AY + + A +M G+SR +GF++F++ +A A+ E+ GK + ++ A K
Sbjct: 238 FGAYGNITSAVIMV-GMDGKSRCFGFINFKSPDDAARAVEELNGKKINDKEWYVGRAQKK 296
Query: 238 NAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDE 297
+ E + ++ +D K N +Y+ NL + D+
Sbjct: 297 SEREIELKRRFE--------------QSMKDAADKYQGLN------LYMKNLDDSIGDDQ 336
Query: 298 LHRHFYNLGVGAIEEVRVQQD-----KGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCS 352
L F N G I ++ +D KG GFV +S EA+ A+ NG ++ GKP+ +
Sbjct: 337 LCELFSNY--GKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVA 394
Query: 353 WG 354
+
Sbjct: 395 FA 396
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 131/284 (46%), Gaps = 45/284 (15%)
Query: 73 RSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAALAIM 128
+S+YVG++ +VT+S L E+F +G V ++ R S + +V++ + AA A+
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 129 TLHGRHICGQAIKVNWAY--ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSD 186
L+ + G+ I+V ++ S++R SG +IF+ +L ++ TL+ FSA+ +
Sbjct: 99 LLNFAPLNGKPIRVMYSNRDPSSRR---SGSANIFIKNLDKAIDHKTLHDTFSAFGNILS 155
Query: 187 ARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAEEKQETD 246
+V D + G+S+G+GFV + + A++AI + G + + + + KQE
Sbjct: 156 CKVATD-EMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLR-----KQE-- 207
Query: 247 NHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYNLG 306
+EN + V+V NL +++L + F G
Sbjct: 208 -------------------------RENSVDKTKFNNVFVKNLSESTTKEDLVKIFGAYG 242
Query: 307 VGAIEEVRVQQD---KGFGFVRYSNHGEAALAIQMANGLVVRGK 347
+ V D + FGF+ + + +AA A++ NG + K
Sbjct: 243 NITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELNGKKINDK 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 68 DPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLI---RKEKSSFGFVDYYDRRSAA 124
D + +V+V N+ + T+ L+++F + G + ++ + FGF+++ AA
Sbjct: 213 DKTKFNNVFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAA 272
Query: 125 LAIMTLHGRHICGQAIKVNWAYASTQRE---------------DTSGHFHIFVGDLSSEV 169
A+ L+G+ I + V A ++RE D ++++ +L +
Sbjct: 273 RAVEELNGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSI 332
Query: 170 NDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQI 229
D L FS Y + ++M D G S+G GFV+F ++EA A+TEM GK + + +
Sbjct: 333 GDDQLCELFSNYGKITSCKIMRD-ANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPL 391
Query: 230 RCNWATKN 237
+A +
Sbjct: 392 YVAFAQRK 399
>Os10g0457000 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 355
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
Query: 74 SVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAALAIMT 129
+ YVGN+ P V+E LL E+F +G V + + ++ +GFV++ A AI
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 130 LHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPS-CSDAR 188
L+ + G+ I+VN A + D + +F+G+L +V++ LY FSA+ ++ +
Sbjct: 86 LNMIKLYGKPIRVNKASQDKKSLDVGAN--LFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
Query: 189 VMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAE 240
+M D +TG SRG+GFVS+ + + ++ AI M + L +R I ++A K + +
Sbjct: 144 IMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTK 195
>Os08g0314800 Similar to Poly(A)-binding protein
Length = 660
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 45/277 (16%)
Query: 74 SVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAALAIMT 129
S+YVG++ +V ++ L +VF G V ++ R + + +V++ AA A+
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEM 99
Query: 130 LHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARV 189
L+ I G+ I++ ++ SG +IF+ +L +++ LY FS + + +V
Sbjct: 100 LNFTPINGKPIRIMYSNRDPSSR-KSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKV 158
Query: 190 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAEEKQETDNHN 249
+ +G S+GYGFV F ++ A+ AI+++ G L +++ + KQE
Sbjct: 159 ATE-MSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVR-----KQE----- 207
Query: 250 AVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVGA 309
+EN NP VYV NL D L F G
Sbjct: 208 ----------------------RENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKF--GP 243
Query: 310 IEEVRVQQD-----KGFGFVRYSNHGEAALAIQMANG 341
I V V ++ + FGFV + N +AA A++ NG
Sbjct: 244 ITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNG 280
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 130/297 (43%), Gaps = 37/297 (12%)
Query: 68 DPSTCRS----VYVGNVHPNVTESLLIEVFQSSGLVERCKL---IRKEKSSFGFVDYYDR 120
DPS+ +S +++ N+ ++ L + F G + CK+ + E +GFV +
Sbjct: 118 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATEMSGESKGYGFVQFELE 177
Query: 121 RSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHF---HIFVGDLSSEVNDATLYAC 177
+A AI L+G + + + V +RE+ SG+ +++V +LS + L
Sbjct: 178 EAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEI 237
Query: 178 FSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKN 237
F + + VM + G+SR +GFV+F N +A A+ ++ GK ++ A K
Sbjct: 238 FGKFGPITSVVVMREG-DGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKK 296
Query: 238 NAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDE 297
+ E + + + KE + N T +Y+ NL ++ DE
Sbjct: 297 SEREMELKEKFEKNI-------------------KEAADKN-QGTNLYLKNLDDSIDDDE 336
Query: 298 LHRHFYNLGVGAIEEVRVQQD-----KGFGFVRYSNHGEAALAIQMANGLVVRGKPI 349
+ + G I +V +D KG GFV + + +A+ A+ NG ++ KP+
Sbjct: 337 KLKEIF-ADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPL 392
>Os08g0557100 Similar to Nucleic acid-binding protein precursor
Length = 194
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 9/172 (5%)
Query: 74 SVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAALAIMT 129
VYVGN+ +V L ++F+ +G+VE ++I ++ FGFV A AI
Sbjct: 17 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 76
Query: 130 LHGRHICGQAIKVNWAYASTQREDTSGH-----FHIFVGDLSSEVNDATLYACFSAYPSC 184
L+ I G+ + VN A R + F +VG+L +V+D+ L FS +
Sbjct: 77 LNRYDINGRLLNVNRAAPRGSRVERPPRQFAPAFRAYVGNLPWQVDDSRLLQLFSEHGEV 136
Query: 185 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 236
+A V++D ++GRSRG+GFVS +++E + AI+ + G+ L R +R N A +
Sbjct: 137 VNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNVAAE 188
>AK119744
Length = 746
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 39/283 (13%)
Query: 74 SVYVGNVHPNVTESLLIEVFQSSGLVERCKLIR----KEKSSFGFVDYYDRRSAALAIMT 129
S+YVG + P+VTE++L E+F S G V ++ R + + +V+Y A+
Sbjct: 49 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEE 108
Query: 130 LHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARV 189
L+ I G+ ++ W+ T G ++F+ +L +++ L+ F+A+ + +V
Sbjct: 109 LNYTVIKGKPCRIMWSQRDPALRKT-GQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKV 167
Query: 190 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAEEKQETDNHN 249
D + G S+GYGFV + + A AI + G L +++ ++ +K+
Sbjct: 168 AQD-ELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVG----HHIPKKERMSKFE 222
Query: 250 AVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYNLG-VG 308
V + T +YV N+ +V DE F G +
Sbjct: 223 EV--------------------------KANFTNIYVKNIDLDVTDDEFRELFEKHGDIT 256
Query: 309 AIEEVRVQQDK--GFGFVRYSNHGEAALAIQMANGLVVRGKPI 349
+ R +Q K GFGFV Y H A+ A++ N RG+ +
Sbjct: 257 SASIARDEQGKSRGFGFVNYIKHEAASAAVEALNDTEFRGQKL 299
>Os09g0115400 Similar to Poly(A)-binding protein
Length = 662
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 43/280 (15%)
Query: 69 PSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIR----KEKSSFGFVDYYDRRSAA 124
P+T S+YVG++ +V ++ L +VF G V ++ R + + +V+Y AA
Sbjct: 38 PAT--SLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAA 95
Query: 125 LAIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSC 184
A+ L+ I G+ I++ ++ SG +IF+ +L +++ LY F + +
Sbjct: 96 RALEMLNFTPINGKPIRIMYSNRDPSLR-KSGTANIFIKNLDKSIDNKALYDTFCVFGNI 154
Query: 185 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAEEKQE 244
+V D +G S+GYGFV + + A+ AI ++ G + +++ + KQE
Sbjct: 155 LSCKVATD-ASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGPFIR-----KQE 208
Query: 245 TDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYN 304
DN V N VYV NL D+L F
Sbjct: 209 RDNSPGQVKFN---------------------------NVYVKNLSENTTEDDLKEIFGK 241
Query: 305 LGVGAIEEVRVQQD---KGFGFVRYSNHGEAALAIQMANG 341
G V + D K FGFV + + +AA A+Q NG
Sbjct: 242 FGTITSAVVMREGDGRSKCFGFVNFESPDDAAQAVQELNG 281
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 127/297 (42%), Gaps = 38/297 (12%)
Query: 68 DPSTCRS----VYVGNVHPNVTESLLIEVFQSSGLVERCKLIRK---EKSSFGFVDYYDR 120
DPS +S +++ N+ ++ L + F G + CK+ E +GFV Y
Sbjct: 119 DPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCKVATDASGESKGYGFVQYERD 178
Query: 121 RSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHF---HIFVGDLSSEVNDATLYAC 177
+A AI L+G + + + V +R+++ G +++V +LS + L
Sbjct: 179 EAAQAAIDKLNGMLMNDKKVYVGPFIRKQERDNSPGQVKFNNVYVKNLSENTTEDDLKEI 238
Query: 178 FSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKN 237
F + + + A VM + GRS+ +GFV+F + +A A+ E+ GK ++ A K
Sbjct: 239 FGKFGTITSAVVMREG-DGRSKCFGFVNFESPDDAAQAVQELNGKKFDDKEWYVGRAQKK 297
Query: 238 NAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDE 297
+ E + + + Q+ K T +Y+ NL V+ D+
Sbjct: 298 SEREMELKEKFEKNL--------------QEAADKYQ------NTNLYLKNLDDSVDDDK 337
Query: 298 LHRHFYNLGVGAIEEVRVQQD-----KGFGFVRYSNHGEAALAIQMANGLVVRGKPI 349
L F G I +V +D +G GFV + + +A+ A+ N +V KP+
Sbjct: 338 LRELFAEYGT--ITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSKMVGSKPL 392
>Os08g0567200 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 235
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 158 FHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIT 217
+ +F GDL +EVND L FS +PS + ARV+ D +TG+++GYGFVSF N + AI
Sbjct: 127 YRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGAIK 186
Query: 218 EMTGKWLGSRQIRC---NWATKNNAEEKQETDNH 248
EM GK++G+R I+ NW + + + + NH
Sbjct: 187 EMNGKYVGNRPIKLRKSNWKERTDVDALERQKNH 220
>Os07g0158300 Similar to RNA binding protein
Length = 364
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 20/198 (10%)
Query: 60 NGNLPPGFDPSTCRS---VYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----F 112
G PP P+ + ++VGN+ +T + + F +G V+ ++I + + F
Sbjct: 118 RGYYPPRSRPALGQEPGRLFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGF 177
Query: 113 GFVDYYDRRSAALAIMTLHGRHICGQAIKVNW-------------AYASTQREDTSGHFH 159
FV AA AI +G + G+ +VN+ A A+ + G F
Sbjct: 178 AFVTMATAEEAATAIQMFNGALLGGRTARVNYPEVPRGGERAVGSAAATRENRRDDGTFK 237
Query: 160 IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 219
I+ G+L V L A F P DARV+++ +GRSRG+GFVSFR ++A+ A+ +
Sbjct: 238 IYAGNLGWGVRADALRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQAALEAL 297
Query: 220 TGKWLGSRQIRCNWATKN 237
G L R +R + A +N
Sbjct: 298 DGVELEGRPLRLSMAEQN 315
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 159 HIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 218
+FVG+L + + FS + ++++D T RSRG+ FV+ +EA TAI
Sbjct: 135 RLFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQM 194
Query: 219 MTGKWLGSRQIRCNWATKNNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENN 278
G LG R R N+ E+ AV GS++ ++EN ++
Sbjct: 195 FNGALLGGRTARVNYPEVPRGGER-------AV----GSAA----------ATRENRRDD 233
Query: 279 PDCTTVYVGNLGHEVNRDELHRHFYN----LGVGAIEEVRVQQDKGFGFVRYSNHGEAAL 334
+Y GNLG V D L F L I E + +GFGFV + +A
Sbjct: 234 -GTFKIYAGNLGWGVRADALRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQA 292
Query: 335 AIQMANGLVVRGKPIKCSWGN 355
A++ +G+ + G+P++ S
Sbjct: 293 ALEALDGVELEGRPLRLSMAE 313
>Os03g0376600 Similar to 29 kDa ribonucleoprotein, chloroplast precursor
(RNA-binding protein cp29)
Length = 265
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 91/169 (53%), Gaps = 9/169 (5%)
Query: 75 VYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAALAIMTL 130
V+VGN+ +V + L +F+ +G VE ++I + + FGFV A+
Sbjct: 88 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQF 147
Query: 131 HGRHICGQAIKVNWAYA-----STQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCS 185
+G + G++++VN S+QR ++VG+LS V++A L FS
Sbjct: 148 NGYILDGRSLRVNSGPPPPREQSSQRAPRGEANRVYVGNLSWGVDNAALANLFSGEGEVL 207
Query: 186 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 234
+A+V++D ++GRSRG+GFV++ + +E E A++ + G + RQIR A
Sbjct: 208 EAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVA 256
>Os02g0622500 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 137
Score = 82.4 bits (202), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 54/85 (63%)
Query: 154 TSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAE 213
++ F +F GDL +EVND L FS YPS + ARV+ D TG++RGY FVSF N +
Sbjct: 25 STDDFRLFCGDLGNEVNDDVLTKAFSKYPSFNMARVIRDKWTGKTRGYAFVSFANASDLA 84
Query: 214 TAITEMTGKWLGSRQIRCNWATKNN 238
A+ EM GK++G+R I+ +T N
Sbjct: 85 AALKEMNGKYVGNRPIKLRKSTWKN 109
>Os07g0631900 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 264
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 15/175 (8%)
Query: 75 VYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAALAIMTL 130
V+VGN+ +V + L +F+ +G VE +++ ++ FGFV A A+
Sbjct: 82 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQF 141
Query: 131 HGRHICGQAIKVNWA-------YASTQREDTSGHF----HIFVGDLSSEVNDATLYACFS 179
+G G+ ++VN +A +F ++VG+L+ V+++TL FS
Sbjct: 142 NGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFS 201
Query: 180 AYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 234
+ DA+V++D ++GRSRG+GFV++ + +E AI+ + G L RQIR A
Sbjct: 202 EQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVA 256
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 80/204 (39%), Gaps = 36/204 (17%)
Query: 157 HFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAI 216
+FVG+L V+ A L F S V++D +TGRSRG+GFV+ +EA A+
Sbjct: 79 DLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAV 138
Query: 217 TEMTGKWLGSRQIRCNWATKNNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPE 276
+ G R +R N G +D + +P
Sbjct: 139 EQFNGYTFQGRPLRVNS----------------------------GPPPPRDDFAPRSPR 170
Query: 277 ----NNPDCTTVYVGNLGHEVNRDELHRHFYN----LGVGAIEEVRVQQDKGFGFVRYSN 328
N +YVGNL V+ L F L I + + +GFGFV Y +
Sbjct: 171 GGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGS 230
Query: 329 HGEAALAIQMANGLVVRGKPIKCS 352
E AI +G+ + G+ I+ +
Sbjct: 231 AEEVNNAISNLDGVDLDGRQIRVT 254
>Os01g0916600 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 150
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%)
Query: 159 HIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 218
+FVG LS ND +L F+++ ++ARV+ D ++GRSRG+GFVSF N +A++A+
Sbjct: 38 KLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDA 97
Query: 219 MTGKWLGSRQIRCNWATK 236
M GK L R IR N+A +
Sbjct: 98 MDGKELEGRSIRVNFANE 115
>Os09g0279500 Similar to Plastid-specific 30S ribosomal protein 2, chloroplast
precursor (PSRP- 2)
Length = 245
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 72 CRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKS----SFGFVDYYDRRSAALAI 127
R +YVGN+ VT L +F G VER +++ + + FGFV A AI
Sbjct: 69 ARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAI 128
Query: 128 MTLHGRHICGQAIKVNWAYASTQREDTSG----------HFHIFVGDLSSEVNDATLYAC 177
+L+ + G+ IKVN + D S + ++VG+L+ V L
Sbjct: 129 ESLNETEVGGRKIKVNVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNLAKSVTTEMLKNF 188
Query: 178 FSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 234
FS A V T +S+GYGFV+F +++E + A++ L + IR N A
Sbjct: 189 FSEKGEVLSATVSRIPGTAKSKGYGFVTFSSEEEVQAAVSTFNNAELEGQPIRVNKA 245
>Os02g0815200 Similar to 29 kDa ribonucleoprotein, chloroplast precursor
(RNA-binding protein cp29)
Length = 316
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
Query: 75 VYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAALAIMTL 130
+Y GN+ N + L + Q E +++ + F FV I L
Sbjct: 147 LYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKNL 206
Query: 131 HGRHICGQAIKVNWAYASTQREDT--SGHFHIFVGDLSSEVNDATLYACFSAYPSCSDAR 188
G G+ ++VN+A + +FVG+LS V L F + AR
Sbjct: 207 DGSLYSGRTMRVNFADKPKPKLPLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVGAR 266
Query: 189 VMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 234
V++D +TGRSRGYGFV + ++E + A++ + G L R+IR N A
Sbjct: 267 VLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNLA 312
>Os02g0221500 Paraneoplastic encephalomyelitis antigen family protein
Length = 397
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 17/191 (8%)
Query: 65 PGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDR 120
PG D S ++VG V TE + F+ G + +++ + + FGFV + D
Sbjct: 60 PGGDSSG--KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD- 116
Query: 121 RSAALAIMTLHGRHIC-GQAIKVNWAYASTQREDTSG--HFHIFVGDLSSEVNDATLYAC 177
++ L H+ G+ ++V + G IFVG L S + + L
Sbjct: 117 --PSVIDKVLEDEHVIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSSLTEDELREH 174
Query: 178 FSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKN 237
FS Y + ++M D+ TGRSRG+GFV+F ++ E I+E + LG +Q+
Sbjct: 175 FSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEI-----K 229
Query: 238 NAEEKQETDNH 248
AE K+ +H
Sbjct: 230 KAEPKKHGGDH 240
>Os04g0591000 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 291
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 73 RSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS---FGFVDYYDRRSAALAIMT 129
R +YV N+ + + ++F G V+ ++I+ + F FV AA A+
Sbjct: 80 RKLYVANIPWSFPAPEIEKLFAQCGAVKDVEVIKGKDGKKKGFAFVTMATAEEAAAAVEK 139
Query: 130 LHGRHICGQAIKVNWAYASTQREDTSG------HFHIFVGDLSSEVNDATLYACFSAYPS 183
L+ + G+ I+V ++ + + ++V +L + + FS +
Sbjct: 140 LNSLDVMGRTIRVEFSKSFRKPAPPPPPGTILERHKLYVSNLPWKARAPNMKEFFSKFNP 199
Query: 184 CSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAEEKQ 243
S A+V++D+ +G+S GYGFVSF ++EAE A+TE+ GK L R +R W +Q
Sbjct: 200 LS-AKVVFDSPSGKSAGYGFVSFGTKEEAEAALTELDGKELMGRPVRLRW--------RQ 250
Query: 244 ETDNHNAVVLTNGSSSNPGM----EASQDTGSKENPENN 278
D+ + V +G + + E D G+K++ E+
Sbjct: 251 SVDDSDDSVKADGEIEDANVDGEAEGVTDNGTKDHGEDK 289
>AK120313
Length = 409
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 65 PGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSF----GFVDYYDR 120
PG D S ++VG V TE + F+ G + +++ + + GFV + D
Sbjct: 72 PGGDSSG--KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGSGFVTFSD- 128
Query: 121 RSAALAIMTLHGRHIC-GQAIKVNWAYASTQREDTSG--HFHIFVGDLSSEVNDATLYAC 177
++ L H+ G+ ++V + G IFVG L S + + L
Sbjct: 129 --PSVIDKVLEDEHVIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSSLTEDELREH 186
Query: 178 FSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 234
FS Y + ++M D+ TGRSRG+GFV+F ++ E I+E + LG +Q+ A
Sbjct: 187 FSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKA 243
>Os07g0516900 Similar to RNA Binding Protein 45
Length = 92
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 165 LSSEVNDATLYACF-SAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 223
L+S+V D+ L F ++YPS A+V++D TGRS+GYGFV F ++ E A+TEM G
Sbjct: 1 LASDVTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGAT 60
Query: 224 LGSRQIRCNWATKNNAEEKQETDNHN 249
L +RQ+R A Q+T + N
Sbjct: 61 LSTRQMRLGPAANKKNMGTQQTYSTN 86
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.131 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,171,336
Number of extensions: 490881
Number of successful extensions: 1872
Number of sequences better than 1.0e-10: 30
Number of HSP's gapped: 1748
Number of HSP's successfully gapped: 40
Length of query: 447
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 343
Effective length of database: 11,605,545
Effective search space: 3980701935
Effective search space used: 3980701935
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)