BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0589400 Os05g0589400|AK059813
(270 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0589400 Similar to I-box binding factor (Fragment) 456 e-129
Os01g0603300 Similar to MCB2 protein 211 6e-55
Os05g0195700 Similar to Transcription factor MYBS2 156 2e-38
Os01g0192300 Similar to I-box binding factor (Fragment) 148 4e-36
Os10g0562100 Homeodomain-like containing protein 118 4e-27
Os08g0151000 Similar to MCB1 protein 118 4e-27
Os01g0142500 Homeodomain-like containing protein 116 2e-26
Os10g0561400 Similar to Transcription factor MYBS3 115 3e-26
AK105558 113 2e-25
Os05g0449900 Homeodomain-like containing protein 112 4e-25
Os01g0524500 Similar to Transcription factor MYBS3 110 1e-24
Os01g0187900 Similar to Transcription factor MYBS2 110 1e-24
Os04g0676700 Similar to MCB1 protein 109 2e-24
Os08g0144000 Zinc finger, CCHC-type domain containing protein 109 2e-24
Os01g0853700 Similar to MCB1 protein 108 4e-24
Os05g0442400 Similar to MybSt1 106 2e-23
Os04g0341900 101 5e-22
Os01g0863300 Similar to MCB2 protein 97 1e-20
Os06g0173200 77 9e-15
Os03g0837200 76 2e-14
Os06g0173300 74 1e-13
Os06g0173400 73 2e-13
Os02g0511200 65 6e-11
>Os05g0589400 Similar to I-box binding factor (Fragment)
Length = 270
Score = 456 bits (1173), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/270 (87%), Positives = 235/270 (87%)
Query: 1 MHAIMARRCSGDYSTAGQRXXXXXXXXXXXXLRLFGVQLHAAAASSPASYLHKSYSMDCL 60
MHAIMARRCSGDYSTAGQR LRLFGVQLHAAAASSPASYLHKSYSMDCL
Sbjct: 1 MHAIMARRCSGDYSTAGQRAGEEGGGGGGAGLRLFGVQLHAAAASSPASYLHKSYSMDCL 60
Query: 61 RLQVXXXXXXXXXXXXXXXXXXXXXXXIDEGCERPAADGYLSDGPHGAAATMRERKKGVP 120
RLQV IDEGCERPAADGYLSDGPHGAAATMRERKKGVP
Sbjct: 61 RLQVSSPSSLQSSSSSPSPLTSSLLLSIDEGCERPAADGYLSDGPHGAAATMRERKKGVP 120
Query: 121 WSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAAKKTNNKRR 180
WSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAAKKTNNKRR
Sbjct: 121 WSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAAKKTNNKRR 180
Query: 181 SSLFDMVQDCDSGGRSLASSDPATRCNNNISASLSLQVSHHKSGDSAWPSSETPSVSEAQ 240
SSLFDMVQDCDSGGRSLASSDPATRCNNNISASLSLQVSHHKSGDSAWPSSETPSVSEAQ
Sbjct: 181 SSLFDMVQDCDSGGRSLASSDPATRCNNNISASLSLQVSHHKSGDSAWPSSETPSVSEAQ 240
Query: 241 QGHGYGTSHHCSPLDLELGMSLSTTPSIGT 270
QGHGYGTSHHCSPLDLELGMSLSTTPSIGT
Sbjct: 241 QGHGYGTSHHCSPLDLELGMSLSTTPSIGT 270
>Os01g0603300 Similar to MCB2 protein
Length = 301
Score = 211 bits (536), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 146/307 (47%), Positives = 168/307 (54%), Gaps = 47/307 (15%)
Query: 5 MARRCS--GDY----------STAGQRXXXX----XXXXXXXXLRLFGVQLHAAAASSPA 48
MAR+CS G+Y ++AG R LRLFGVQ+H AA
Sbjct: 1 MARKCSYCGNYGHNSRTCSSSASAGHRDTTMLCDGGDGGGGSGLRLFGVQVHVAAGGGGG 60
Query: 49 SY-----LHKSYSMDCLRLQVXXXXXXXXXXXXXXXXXXXXXXXIDEGCERPAADGYLSD 103
+ KSYSMDCL+L IDEG A++GYLSD
Sbjct: 61 GGGGGLPMKKSYSMDCLQL-AAAGAAPGSLVSPSSSSSSSMLLSIDEGGLERASNGYLSD 119
Query: 104 GPHGAAATMRERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQK 163
GPHG ++ERKKGVPWSE+EHRLFL GLEKLGKGDWRGISRS+VTTRTPTQVASHAQK
Sbjct: 120 GPHGR--IVQERKKGVPWSEEEHRLFLVGLEKLGKGDWRGISRSYVTTRTPTQVASHAQK 177
Query: 164 FFLRHNSAAKKTNNKRRSSLFDMVQDCDSGGR-SLASSDPATRCNNNISASLSLQVSHHK 222
FFLR +S KK KRRSSLFDMV C++G R S S S SLSL +H
Sbjct: 178 FFLRQSSIGKK---KRRSSLFDMVPICENGARVSEQLSGEGAAAAAAASTSLSLMNTHET 234
Query: 223 SGDSA----WPSSET------------PSVSEAQQGHG---YGTSHHCSPLDLELGMSLS 263
S D S+E P V QQ +G HHC+PLDLELGMS+S
Sbjct: 235 SSDRVAAIDLNSTEEDDTVGASGRPFFPVVLMEQQQQASHGHGHHHHCTPLDLELGMSVS 294
Query: 264 TTPSIGT 270
+TPSIGT
Sbjct: 295 STPSIGT 301
>Os05g0195700 Similar to Transcription factor MYBS2
Length = 287
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 102/157 (64%), Gaps = 14/157 (8%)
Query: 32 LRLFGVQLHAAAASSPASYLHKSYSMDCLRLQVXXXXXXXXXXXXXXXXXXXXXXXIDEG 91
LRLFGVQL SSP L K SM+CL I+E
Sbjct: 47 LRLFGVQLQVGGGSSP---LKKCLSMECL----ASPAYYGASASPSVSSSSSSLVSIEEN 99
Query: 92 CERPAADGYLSDGPHGAAATMRERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTT 151
ER ++GYLSDG G ++ERKKGVPW+E+EH++FLAGL+KLGKGDWRGISR FVTT
Sbjct: 100 TER-VSNGYLSDGLMG---RVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTT 155
Query: 152 RTPTQVASHAQKFFLRHNSAAKKTNNKRRSSLFDMVQ 188
RTPTQVASHAQK+FLR NS +K KRRSSLFD+V+
Sbjct: 156 RTPTQVASHAQKYFLRQNSMTQK---KRRSSLFDVVE 189
>Os01g0192300 Similar to I-box binding factor (Fragment)
Length = 310
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 107/193 (55%), Gaps = 21/193 (10%)
Query: 6 ARRCSGDYSTAGQRXXXXXXXXXXXXLRLFGVQLHAAAASSPASYLHKSYSMDCLRLQVX 65
+R C+G S Q +RLFGVQLH A L K +SM+CL
Sbjct: 15 SRTCTGQRSL--QESGGGYGGGGAGGVRLFGVQLHVGGAP-----LKKCFSMECLSSPSP 67
Query: 66 XXXXXXXXXXXXXXXXXXXXXXI-------DEGCERPAADGYLSDGPHGAAATMRERKKG 118
+E E+ A+GYLSDG A +ERKKG
Sbjct: 68 SPSPAYYAAVAAAASNSSPTVSSSSSLVSVEEAGEK-MANGYLSDG---LMARAQERKKG 123
Query: 119 VPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAAKKTNNK 178
VPW+E+EHR FL GLEKLGKGDWRGISR FVTTRTPTQVASHAQK+FLR +S +K K
Sbjct: 124 VPWTEEEHRKFLVGLEKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQSSLTQK---K 180
Query: 179 RRSSLFDMVQDCD 191
RRSSLFD+++D +
Sbjct: 181 RRSSLFDVIEDAE 193
>Os10g0562100 Homeodomain-like containing protein
Length = 265
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 75/103 (72%), Gaps = 4/103 (3%)
Query: 89 DEGCERPAADGYLSDGPHGAAA-TMRERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRS 147
D G R + D L+ G ++ERKKGVPW+E+EH+ FL GL +LGKGDWRGIS++
Sbjct: 68 DGGKRRASDDSELASGQQKRRRRKVQERKKGVPWTEEEHKKFLEGLRQLGKGDWRGISKN 127
Query: 148 FVTTRTPTQVASHAQKFFLRHNSAAKKTNNKRRSSLFDMVQDC 190
FVT+RT TQVASHAQK+FLR + KK KRR+SLFD+V +C
Sbjct: 128 FVTSRTATQVASHAQKYFLRQTNPGKK---KRRASLFDVVAEC 167
>Os08g0151000 Similar to MCB1 protein
Length = 295
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 61/70 (87%), Gaps = 3/70 (4%)
Query: 118 GVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAAKKTNN 177
VPW+E+EHR FLAGLEKLGKGDWRGIS++FVTTRTPTQVASHAQK+FLR + KK
Sbjct: 7 AVPWTEEEHRTFLAGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQTNPNKK--- 63
Query: 178 KRRSSLFDMV 187
KRRSSLFDM+
Sbjct: 64 KRRSSLFDMM 73
>Os01g0142500 Homeodomain-like containing protein
Length = 294
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 9/147 (6%)
Query: 106 HGAAATMRERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFF 165
H +ERKKGVPW+E+EH+LFL GL+K GKGDWR ISR+FV TRTPTQVASHAQK+F
Sbjct: 127 HFGRTPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVQTRTPTQVASHAQKYF 186
Query: 166 LRHNSAAKKTNNKRRSSLFDMVQDCDSGGRSLASSDPATRCNNNISASLSLQVSHHKSGD 225
+R NS K +KRRSS+ D+ + R + S + N + +++L+ V+ S
Sbjct: 187 IRLNSGGK---DKRRSSIHDITTVNLTDDRPPSPSQSSLISNQSNTSTLTAAVAPFSSTA 243
Query: 226 SAWP------SSETPSVSEAQQGHGYG 246
P S +PS + G+G G
Sbjct: 244 DVKPQNAANASFNSPSRTLGMAGYGMG 270
>Os10g0561400 Similar to Transcription factor MYBS3
Length = 234
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 62/72 (86%), Gaps = 3/72 (4%)
Query: 118 GVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAAKKTNN 177
GVPW+E+EHR FL GL+KLGKGDWRGISR+FV +RTPTQVASHAQK+F+R ++ ++
Sbjct: 9 GVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMTRR--- 65
Query: 178 KRRSSLFDMVQD 189
KRRSSLFDMV D
Sbjct: 66 KRRSSLFDMVPD 77
>AK105558
Length = 90
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 61/72 (84%), Gaps = 3/72 (4%)
Query: 118 GVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAAKKTNN 177
GVPW+E+EHR FL GL+KLGKGDWRGISR+FV +RTPTQVASHAQK+F+R ++ T
Sbjct: 10 GVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNM---TRR 66
Query: 178 KRRSSLFDMVQD 189
KRRSSLFDMV D
Sbjct: 67 KRRSSLFDMVPD 78
>Os05g0449900 Homeodomain-like containing protein
Length = 315
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 64/74 (86%), Gaps = 3/74 (4%)
Query: 113 RERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAA 172
+ERKKGVPW+E+EH+LFL GL+K G+GDWR ISR+FVT+RTPTQVASHAQK+F+R NS
Sbjct: 145 QERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGG 204
Query: 173 KKTNNKRRSSLFDM 186
K +KRRSS+ D+
Sbjct: 205 K---DKRRSSIHDI 215
>Os01g0524500 Similar to Transcription factor MYBS3
Length = 284
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 63/74 (85%), Gaps = 3/74 (4%)
Query: 113 RERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAA 172
+ER+KG+PW+E+EHRLFL GL+K GKGDWR ISR+FV +RTPTQVASHAQK+F+R NS
Sbjct: 114 QERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMN 173
Query: 173 KKTNNKRRSSLFDM 186
+ ++RRSS+ D+
Sbjct: 174 R---DRRRSSIHDI 184
>Os01g0187900 Similar to Transcription factor MYBS2
Length = 366
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 93/161 (57%), Gaps = 18/161 (11%)
Query: 32 LRLFGVQLHAAAASSPASYLHKSYSMDCLRLQVXXXXXXXXXXXXXXXXXXXXXXXIDEG 91
+RLFGV+L S P + KS SM C+ +
Sbjct: 30 VRLFGVRL----TSPPEVAMKKSASMSCIASSLGSGGGSGGSSPAGTGRGGGGGGE---- 81
Query: 92 CERPAADGYLSDGPHGAAATMR---ERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSF 148
A GY SD P A+ + ERKKG PW+E+EHR+FL GL+KLGKGDWRGISR+F
Sbjct: 82 ----GAAGYASDDPTHASCSTNGRGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNF 137
Query: 149 VTTRTPTQVASHAQKFFLRHNSAAKKTNNKRRSSLFDMVQD 189
V +RTPTQVASHAQK+F+R +++++ RRSSLFDMV +
Sbjct: 138 VVSRTPTQVASHAQKYFIRQTNSSRRK---RRSSLFDMVPE 175
>Os04g0676700 Similar to MCB1 protein
Length = 318
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 75/106 (70%), Gaps = 5/106 (4%)
Query: 108 AAATMRERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLR 167
A ++ +ER+KG+ W+E EHRLFL GLEK GKGDWR ISR+FV +RTPTQVASHAQK+F+R
Sbjct: 133 AKSSEQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKYFIR 192
Query: 168 HNSAAKKTNNKRRSSLFDMVQDCDSGGRSLASSDPATRCNNNISAS 213
NS ++ +RRSS+ D+ + G + A+ P T N SA+
Sbjct: 193 LNSMNRE---RRRSSIHDIT--SVNNGDTSAAQGPITGQPNGPSAN 233
>Os08g0144000 Zinc finger, CCHC-type domain containing protein
Length = 383
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 62/77 (80%), Gaps = 3/77 (3%)
Query: 113 RERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAA 172
+ RK+G WSE+EH+ FL GL KLGKGDWRGISR++V +RTPTQVASHAQK+F+R +
Sbjct: 97 KRRKRGEAWSEEEHKKFLLGLSKLGKGDWRGISRNYVGSRTPTQVASHAQKYFIRQTNVH 156
Query: 173 KKTNNKRRSSLFDMVQD 189
++ KRRSSLFDMV D
Sbjct: 157 RR---KRRSSLFDMVID 170
>Os01g0853700 Similar to MCB1 protein
Length = 299
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 63/77 (81%), Gaps = 3/77 (3%)
Query: 110 ATMRERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHN 169
A +ERKKGVPW+E+EH+ FL GL+K G+GDWR ISR FVT+RTPTQVASHAQK+F+R N
Sbjct: 128 APDQERKKGVPWTEEEHKSFLMGLKKYGRGDWRNISRYFVTSRTPTQVASHAQKYFIRLN 187
Query: 170 SAAKKTNNKRRSSLFDM 186
S K +KRRSS+ D+
Sbjct: 188 SGGK---DKRRSSIHDI 201
>Os05g0442400 Similar to MybSt1
Length = 182
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 61/76 (80%)
Query: 106 HGAAATMRERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFF 165
HG + ER++GVPW+E+EHRLFL GLEK G+GDWR ISR V TRTPTQVASHAQKFF
Sbjct: 100 HGRGSGGDERRRGVPWTEEEHRLFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKFF 159
Query: 166 LRHNSAAKKTNNKRRS 181
+R +A+ + ++KR+S
Sbjct: 160 IRQANASSRGDSKRKS 175
>Os04g0341900
Length = 201
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 60/74 (81%), Gaps = 3/74 (4%)
Query: 114 ERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAAK 173
ER+KG+PW+E+EHRLFL GL+K GKGD ISR+FV +RTPTQVASHAQK+F+R NS +
Sbjct: 101 ERRKGIPWTEEEHRLFLLGLDKFGKGDLHSISRNFVISRTPTQVASHAQKYFIRLNSMNR 160
Query: 174 KTNNKRRSSLFDMV 187
++RRSS+ D+
Sbjct: 161 ---DRRRSSIHDIT 171
>Os01g0863300 Similar to MCB2 protein
Length = 148
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 114 ERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAAK 173
ER++GVPWSE EHRLFL GL++ G+GDWR ISR V TRTPTQVASHAQK+F+R +A
Sbjct: 75 ERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGA 134
Query: 174 KTNNKRRSSLFDM 186
+ + +R S+ D+
Sbjct: 135 R--DSKRKSIHDI 145
>Os06g0173200
Length = 321
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 116 KKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLR 167
K+ V W+E+EHRLF+ GL G+GDW+ IS+ VTTRT QV+SHAQKFFL+
Sbjct: 173 KRRVIWTEEEHRLFMVGLRVFGRGDWKNISKHLVTTRTAAQVSSHAQKFFLK 224
>Os03g0837200
Length = 212
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 96 AADGYLSDGPHGAAATMRERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPT 155
AA G SDG + E+K G+ WSE+EHR L G+E++G G W IS +V +RTP
Sbjct: 107 AAAGPGSDGGGEEGKVVVEKKSGI-WSEEEHRQCLRGIEEIGHGRWTQISIEYVPSRTPI 165
Query: 156 QVASHAQKFFLRHNSAAKKTNNKRRSSLFD 185
Q+ASH QK+FLR AK +++R S+ D
Sbjct: 166 QIASHTQKYFLR---MAKPKEDRKRKSIHD 192
>Os06g0173300
Length = 394
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 104 GPHGAAATMRERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQK 163
G H AA T R+ W+ +EHR FL GL G+G+W+ IS +FV ++TP QV+SHAQK
Sbjct: 172 GRHRAAPTNTTRRF---WTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQVSSHAQK 228
Query: 164 FFLRHNSAAKKTNNKRRSSLFDMVQDCDSGGRSLASSDPATRCNNNISASLSL 216
+F R SAA +K+R S+ D+ + D+ +S NNN SL
Sbjct: 229 YFRRVESAAA---DKQRYSINDVGLNDDTAAMDGTNS----YSNNNFGGWQSL 274
>Os06g0173400
Length = 331
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 10/111 (9%)
Query: 106 HGAAATMRERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFF 165
H AA T R+ W+ +EHR FL GL G+G+W+ IS +FV ++TP QV+SHAQK+F
Sbjct: 111 HRAAPTNTTRRF---WTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQVSSHAQKYF 167
Query: 166 LRHNSAAKKTNNKRRSSLFDMVQDCDSGGRSLASSDPATRCNNNISASLSL 216
R SAA +K+R S+ D+ + D+ +S NNN SL
Sbjct: 168 RRVESAAA---DKQRYSINDVGLNDDTAAMDGTNS----YSNNNFGGWQSL 211
>Os02g0511200
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 115 RKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAAKK 174
RKK W+ +EH FL G+ GKG+W+ ++ FV T++ TQ+ASH QKF +R ++
Sbjct: 170 RKKAEMWTREEHSQFLHGISTYGKGNWKALASEFVKTKSSTQIASHYQKFCIREEK--RR 227
Query: 175 TNNKRRSSLFDMV 187
+ +R+S+ D+V
Sbjct: 228 LSKCKRASIHDIV 240
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.127 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,844,835
Number of extensions: 328155
Number of successful extensions: 1117
Number of sequences better than 1.0e-10: 23
Number of HSP's gapped: 1102
Number of HSP's successfully gapped: 23
Length of query: 270
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 171
Effective length of database: 11,866,615
Effective search space: 2029191165
Effective search space used: 2029191165
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 155 (64.3 bits)