BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0195700 Os05g0195700|AK065594
(287 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0195700 Similar to Transcription factor MYBS2 432 e-121
Os01g0192300 Similar to I-box binding factor (Fragment) 280 1e-75
Os01g0603300 Similar to MCB2 protein 187 5e-48
Os05g0589400 Similar to I-box binding factor (Fragment) 144 6e-35
Os01g0187900 Similar to Transcription factor MYBS2 131 5e-31
Os10g0562100 Homeodomain-like containing protein 127 8e-30
Os01g0524500 Similar to Transcription factor MYBS3 123 1e-28
Os10g0561400 Similar to Transcription factor MYBS3 123 1e-28
Os08g0151000 Similar to MCB1 protein 123 2e-28
AK105558 122 4e-28
Os04g0676700 Similar to MCB1 protein 121 6e-28
Os01g0142500 Homeodomain-like containing protein 119 3e-27
Os05g0449900 Homeodomain-like containing protein 118 5e-27
Os01g0853700 Similar to MCB1 protein 117 7e-27
Os04g0341900 117 1e-26
Os08g0144000 Zinc finger, CCHC-type domain containing protein 116 2e-26
Os01g0863300 Similar to MCB2 protein 103 2e-22
Os05g0442400 Similar to MybSt1 100 2e-21
Os06g0173200 79 4e-15
Os06g0173400 75 5e-14
Os06g0173300 75 5e-14
Os03g0837200 72 4e-13
Os02g0511200 70 3e-12
>Os05g0195700 Similar to Transcription factor MYBS2
Length = 287
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/287 (81%), Positives = 233/287 (81%)
Query: 1 MARKCSSCGNNGHNSRTCSGQRVLDHSIXXXXXXXXXXXXXXXXXXLRLFGVQLQVGGGS 60
MARKCSSCGNNGHNSRTCSGQRVLDHSI LRLFGVQLQVGGGS
Sbjct: 1 MARKCSSCGNNGHNSRTCSGQRVLDHSISSSNSGSTTAAAATACGGLRLFGVQLQVGGGS 60
Query: 61 SPLKKCLSMECXXXXXXXXXXXXXXXXXXXXXXXXIEENTERVSNGYLSDGLMGRVQERK 120
SPLKKCLSMEC IEENTERVSNGYLSDGLMGRVQERK
Sbjct: 61 SPLKKCLSMECLASPAYYGASASPSVSSSSSSLVSIEENTERVSNGYLSDGLMGRVQERK 120
Query: 121 KGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQKKR 180
KGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQKKR
Sbjct: 121 KGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQKKR 180
Query: 181 RSSLFDVVEGIKRAAAMPISGSASELQIPGMSIGVGVVKEEVVLPPCLNLMXXXXXXXXX 240
RSSLFDVVEGIKRAAAMPISGSASELQIPGMSIGVGVVKEEVVLPPCLNLM
Sbjct: 181 RSSLFDVVEGIKRAAAMPISGSASELQIPGMSIGVGVVKEEVVLPPCLNLMSNSSSASQH 240
Query: 241 XXXLTLLANPQVQLQMPDLELKMSTSRLSDQSGPSPSTPFFGTIRVT 287
LTLLANPQVQLQMPDLELKMSTSRLSDQSGPSPSTPFFGTIRVT
Sbjct: 241 SPSLTLLANPQVQLQMPDLELKMSTSRLSDQSGPSPSTPFFGTIRVT 287
>Os01g0192300 Similar to I-box binding factor (Fragment)
Length = 310
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/320 (50%), Positives = 191/320 (59%), Gaps = 43/320 (13%)
Query: 1 MARKCSSCGNNGHNSRTCSGQRVLDHSIXXXXXXXXXXXXXXXXXXLRLFGVQLQVGGGS 60
MARKCSSCGNNGHNSRTC+GQR L S +RLFGVQL VGG
Sbjct: 1 MARKCSSCGNNGHNSRTCTGQRSLQESGGGYGGGGAGG--------VRLFGVQLHVGG-- 50
Query: 61 SPLKKCLSMEC-----------XXXXXXXXXXXXXXXXXXXXXXXXIEENTERVSNGYLS 109
+PLKKC SMEC +EE E+++NGYLS
Sbjct: 51 APLKKCFSMECLSSPSPSPSPAYYAAVAAAASNSSPTVSSSSSLVSVEEAGEKMANGYLS 110
Query: 110 DGLMGRVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYF 169
DGLM R QERKKGVPWTEEEH+ FL GL+KLGKGDWRGISRHFVTTRTPTQVASHAQKYF
Sbjct: 111 DGLMARAQERKKGVPWTEEEHRKFLVGLEKLGKGDWRGISRHFVTTRTPTQVASHAQKYF 170
Query: 170 LRQNSMTQKKRRSSLFDVVEGIKRAAAM--------PISGSASELQIPGMSIGV-GVVKE 220
LRQ+S+TQKKRRSSLFDV+E ++A ++ + +E+ P +S+G+ + +
Sbjct: 171 LRQSSLTQKKRRSSLFDVIEDAEKAPSVNERLKLRHETASVPAEMGFPALSLGISSMAQP 230
Query: 221 EVVL--PPCLNLMXXXXXXXXXXXXLT---------LLANPQVQLQM--PDLELKMSTSR 267
E +L PP L L ++A PQVQLQ+ PDLELK+ST R
Sbjct: 231 EAMLLPPPSLTLTPSCSSPAVSSSSSEQPRTIHPSLMVAKPQVQLQLQPPDLELKISTVR 290
Query: 268 LSDQSGPSPSTPFFGTIRVT 287
+DQ SP TPF GTIRVT
Sbjct: 291 QNDQPSSSPRTPFLGTIRVT 310
>Os01g0603300 Similar to MCB2 protein
Length = 301
Score = 187 bits (476), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 121/201 (60%), Gaps = 16/201 (7%)
Query: 1 MARKCSSCGNNGHNSRTCSGQRVLDHSIXXXXXXXXXXXXXXXXXXLRLFGVQLQVGGGS 60
MARKCS CGN GHNSRTCS H LRLFGVQ+ V G
Sbjct: 1 MARKCSYCGNYGHNSRTCSSSASAGH---RDTTMLCDGGDGGGGSGLRLFGVQVHVAAGG 57
Query: 61 S--------PLKKCLSMECXXXXXXXXX---XXXXXXXXXXXXXXXIEEN-TERVSNGYL 108
P+KK SM+C I+E ER SNGYL
Sbjct: 58 GGGGGGGGLPMKKSYSMDCLQLAAAGAAPGSLVSPSSSSSSSMLLSIDEGGLERASNGYL 117
Query: 109 SDGLMGR-VQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQK 167
SDG GR VQERKKGVPW+EEEH++FL GL+KLGKGDWRGISR +VTTRTPTQVASHAQK
Sbjct: 118 SDGPHGRIVQERKKGVPWSEEEHRLFLVGLEKLGKGDWRGISRSYVTTRTPTQVASHAQK 177
Query: 168 YFLRQNSMTQKKRRSSLFDVV 188
+FLRQ+S+ +KKRRSSLFD+V
Sbjct: 178 FFLRQSSIGKKKRRSSLFDMV 198
>Os05g0589400 Similar to I-box binding factor (Fragment)
Length = 270
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 101/157 (64%), Gaps = 14/157 (8%)
Query: 47 LRLFGVQLQVGGGSSP---LKKCLSMEC----XXXXXXXXXXXXXXXXXXXXXXXXIEEN 99
LRLFGVQL SSP L K SM+C I+E
Sbjct: 32 LRLFGVQLHAAAASSPASYLHKSYSMDCLRLQVSSPSSLQSSSSSPSPLTSSLLLSIDEG 91
Query: 100 TER-VSNGYLSDGLMG---RVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTT 155
ER ++GYLSDG G ++ERKKGVPW+E+EH++FLAGL+KLGKGDWRGISR FVTT
Sbjct: 92 CERPAADGYLSDGPHGAAATMRERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTT 151
Query: 156 RTPTQVASHAQKYFLRQNSMTQK---KRRSSLFDVVE 189
RTPTQVASHAQK+FLR NS +K KRRSSLFD+V+
Sbjct: 152 RTPTQVASHAQKFFLRHNSAAKKTNNKRRSSLFDMVQ 188
>Os01g0187900 Similar to Transcription factor MYBS2
Length = 366
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 102/196 (52%), Gaps = 31/196 (15%)
Query: 1 MARKCSSCGNNGHNSRTCSGQRVLDHSIXXXXXXXXXXXXXXXXXXLRLFGVQLQVGGGS 60
M R+CS C NNGHN+RTC + +RLFGV+L +
Sbjct: 1 MTRRCSHCSNNGHNARTCPARGG-----------------GGGGGGVRLFGVRL-----T 38
Query: 61 SP----LKKCLSMECXXXXXXXXXXXXXXXXXXXXXXXXIEENTERVSNG----YLSDGL 112
SP +KK SM C + S
Sbjct: 39 SPPEVAMKKSASMSCIASSLGSGGGSGGSSPAGTGRGGGGGGEGAAGYASDDPTHASCST 98
Query: 113 MGRVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQ 172
GR ERKKG PWTEEEH+MFL GL KLGKGDWRGISR+FV +RTPTQVASHAQKYF+RQ
Sbjct: 99 NGR-GERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQ 157
Query: 173 NSMTQKKRRSSLFDVV 188
+ +++KRRSSLFD+V
Sbjct: 158 TNSSRRKRRSSLFDMV 173
>Os10g0562100 Homeodomain-like containing protein
Length = 265
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 67/74 (90%)
Query: 115 RVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNS 174
+VQERKKGVPWTEEEH+ FL GL +LGKGDWRGIS++FVT+RT TQVASHAQKYFLRQ +
Sbjct: 91 KVQERKKGVPWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKYFLRQTN 150
Query: 175 MTQKKRRSSLFDVV 188
+KKRR+SLFDVV
Sbjct: 151 PGKKKRRASLFDVV 164
>Os01g0524500 Similar to Transcription factor MYBS3
Length = 284
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 63/72 (87%)
Query: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
QER+KG+PWTEEEH++FL GLDK GKGDWR ISR+FV +RTPTQVASHAQKYF+R NSM
Sbjct: 114 QERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMN 173
Query: 177 QKKRRSSLFDVV 188
+ +RRSS+ D+
Sbjct: 174 RDRRRSSIHDIT 185
>Os10g0561400 Similar to Transcription factor MYBS3
Length = 234
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 54/69 (78%), Positives = 64/69 (92%)
Query: 120 KKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQKK 179
+ GVPWTEEEH+ FL GL KLGKGDWRGISR+FV +RTPTQVASHAQKYF+RQ++MT++K
Sbjct: 7 EAGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMTRRK 66
Query: 180 RRSSLFDVV 188
RRSSLFD+V
Sbjct: 67 RRSSLFDMV 75
>Os08g0151000 Similar to MCB1 protein
Length = 295
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 62/67 (92%)
Query: 122 GVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQKKRR 181
VPWTEEEH+ FLAGL+KLGKGDWRGIS++FVTTRTPTQVASHAQKYFLRQ + +KKRR
Sbjct: 7 AVPWTEEEHRTFLAGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQTNPNKKKRR 66
Query: 182 SSLFDVV 188
SSLFD++
Sbjct: 67 SSLFDMM 73
>AK105558
Length = 90
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 63/67 (94%)
Query: 122 GVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQKKRR 181
GVPWTEEEH+ FL GL KLGKGDWRGISR+FV +RTPTQVASHAQKYF+RQ++MT++KRR
Sbjct: 10 GVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMTRRKRR 69
Query: 182 SSLFDVV 188
SSLFD+V
Sbjct: 70 SSLFDMV 76
>Os04g0676700 Similar to MCB1 protein
Length = 318
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 70/88 (79%), Gaps = 3/88 (3%)
Query: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
QER+KG+ WTE+EH++FL GL+K GKGDWR ISR+FV +RTPTQVASHAQKYF+R NSM
Sbjct: 138 QERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMN 197
Query: 177 QKKRRSSLFDVV---EGIKRAAAMPISG 201
+++RRSS+ D+ G AA PI+G
Sbjct: 198 RERRRSSIHDITSVNNGDTSAAQGPITG 225
>Os01g0142500 Homeodomain-like containing protein
Length = 294
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 61/72 (84%)
Query: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
QERKKGVPWTEEEH++FL GL K GKGDWR ISR+FV TRTPTQVASHAQKYF+R NS
Sbjct: 134 QERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVQTRTPTQVASHAQKYFIRLNSGG 193
Query: 177 QKKRRSSLFDVV 188
+ KRRSS+ D+
Sbjct: 194 KDKRRSSIHDIT 205
>Os05g0449900 Homeodomain-like containing protein
Length = 315
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 63/75 (84%)
Query: 114 GRVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQN 173
G QERKKGVPWTEEEH++FL GL K G+GDWR ISR+FVT+RTPTQVASHAQKYF+R N
Sbjct: 142 GPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLN 201
Query: 174 SMTQKKRRSSLFDVV 188
S + KRRSS+ D+
Sbjct: 202 SGGKDKRRSSIHDIT 216
>Os01g0853700 Similar to MCB1 protein
Length = 299
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 61/72 (84%)
Query: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
QERKKGVPWTEEEH+ FL GL K G+GDWR ISR+FVT+RTPTQVASHAQKYF+R NS
Sbjct: 131 QERKKGVPWTEEEHKSFLMGLKKYGRGDWRNISRYFVTSRTPTQVASHAQKYFIRLNSGG 190
Query: 177 QKKRRSSLFDVV 188
+ KRRSS+ D+
Sbjct: 191 KDKRRSSIHDIT 202
>Os04g0341900
Length = 201
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 3/90 (3%)
Query: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
QER+KG+PWTEEEH++FL GLDK GKGD ISR+FV +RTPTQVASHAQKYF+R NSM
Sbjct: 100 QERRKGIPWTEEEHRLFLLGLDKFGKGDLHSISRNFVISRTPTQVASHAQKYFIRLNSMN 159
Query: 177 QKKRRSSLFD---VVEGIKRAAAMPISGSA 203
+ +RRSS+ D V G A PI+G A
Sbjct: 160 RDRRRSSIHDITSVTAGDVAAQQGPITGQA 189
>Os08g0144000 Zinc finger, CCHC-type domain containing protein
Length = 383
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 72/89 (80%), Gaps = 2/89 (2%)
Query: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
+ RK+G W+EEEH+ FL GL KLGKGDWRGISR++V +RTPTQVASHAQKYF+RQ ++
Sbjct: 97 KRRKRGEAWSEEEHKKFLLGLSKLGKGDWRGISRNYVGSRTPTQVASHAQKYFIRQTNVH 156
Query: 177 QKKRRSSLFDVVEGIKRAAAMPISGSASE 205
++KRRSSLFD+V I + P+S ++S+
Sbjct: 157 RRKRRSSLFDMV--IDDSDDQPLSRTSSQ 183
>Os01g0863300 Similar to MCB2 protein
Length = 148
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Query: 112 LMGRVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLR 171
L+ R ER++GVPW+E+EH++FL GLD+ G+GDWR ISR V TRTPTQVASHAQKYF+R
Sbjct: 69 LIMRGAERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIR 128
Query: 172 Q-NSMTQKKRRSSLFDV 187
Q N+ + +R S+ D+
Sbjct: 129 QANAGARDSKRKSIHDI 145
>Os05g0442400 Similar to MybSt1
Length = 182
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 58/74 (78%), Gaps = 2/74 (2%)
Query: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
ER++GVPWTEEEH++FL GL+K G+GDWR ISR V TRTPTQVASHAQK+F+RQ + +
Sbjct: 107 DERRRGVPWTEEEHRLFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKFFIRQANAS 166
Query: 177 QK--KRRSSLFDVV 188
+ +R S+ D+
Sbjct: 167 SRGDSKRKSIHDIT 180
>Os06g0173200
Length = 321
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 43/55 (78%)
Query: 120 KKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNS 174
K+ V WTEEEH++F+ GL G+GDW+ IS+H VTTRT QV+SHAQK+FL+ +
Sbjct: 173 KRRVIWTEEEHRLFMVGLRVFGRGDWKNISKHLVTTRTAAQVSSHAQKFFLKMEA 227
>Os06g0173400
Length = 331
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 125 WTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQKKRRSSL 184
WT EEH+ FL GL G+G+W+ IS +FV ++TP QV+SHAQKYF R S K+R S+
Sbjct: 123 WTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQVSSHAQKYFRRVESAAADKQRYSI 182
Query: 185 FDV 187
DV
Sbjct: 183 NDV 185
>Os06g0173300
Length = 394
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 125 WTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQKKRRSSL 184
WT EEH+ FL GL G+G+W+ IS +FV ++TP QV+SHAQKYF R S K+R S+
Sbjct: 186 WTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQVSSHAQKYFRRVESAAADKQRYSI 245
Query: 185 FDV 187
DV
Sbjct: 246 NDV 248
>Os03g0837200
Length = 212
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 111 GLMGRVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFL 170
G G+V KK W+EEEH+ L G++++G G W IS +V +RTP Q+ASH QKYFL
Sbjct: 117 GEEGKVVVEKKSGIWSEEEHRQCLRGIEEIGHGRWTQISIEYVPSRTPIQIASHTQKYFL 176
Query: 171 RQNSMTQKKRRSSLFDV 187
R + ++R S+ D
Sbjct: 177 RMAKPKEDRKRKSIHDT 193
>Os02g0511200
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 119 RKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQK 178
RKK WT EEH FL G+ GKG+W+ ++ FV T++ TQ+ASH QK+ +R+
Sbjct: 170 RKKAEMWTREEHSQFLHGISTYGKGNWKALASEFVKTKSSTQIASHYQKFCIREEKRRLS 229
Query: 179 K-RRSSLFDVV 188
K +R+S+ D+V
Sbjct: 230 KCKRASIHDIV 240
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,032,631
Number of extensions: 252155
Number of successful extensions: 1236
Number of sequences better than 1.0e-10: 23
Number of HSP's gapped: 1232
Number of HSP's successfully gapped: 24
Length of query: 287
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 187
Effective length of database: 11,814,401
Effective search space: 2209292987
Effective search space used: 2209292987
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 155 (64.3 bits)