BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0373400 Os01g0373400|AK110973
(376 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0373400 Homeodomain-like containing protein 679 0.0
Os01g0549300 Homeodomain-like containing protein 397 e-111
Os08g0178900 Homeodomain-like containing protein 397 e-111
Os06g0716600 199 3e-51
Os11g0635000 Hypothetical protein 191 7e-49
Os10g0449100 148 8e-36
Os01g0821200 139 5e-33
Os01g0527800 133 3e-31
Os06g0521000 Homeodomain-like containing protein 132 4e-31
Os11g0282700 Homeodomain-like containing protein 127 2e-29
Os09g0241700 Homeodomain-like containing protein 122 3e-28
Os01g0385600 Homeodomain-like containing protein 112 4e-25
Os01g0261900 104 1e-22
Os11g0514200 102 4e-22
Os06g0534700 102 5e-22
Os10g0563100 100 2e-21
Os02g0466700 100 3e-21
Os11g0506300 99 5e-21
Os04g0286500 Homeodomain-like containing protein 97 2e-20
Os10g0410300 Homeodomain-like containing protein 78 1e-14
Os07g0575300 73 4e-13
Os09g0318600 Homeodomain-like containing protein 70 3e-12
Os09g0317700 Homeodomain-like containing protein 69 4e-12
Os05g0348300 65 9e-11
>Os01g0373400 Homeodomain-like containing protein
Length = 376
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/376 (88%), Positives = 333/376 (88%)
Query: 1 MSTPGAAWRRNGSRTLDAAATAPGRTLGVGAAAAAPSFGRGSFGHAVXXXXXXXXXXXXX 60
MSTPGAAWRRNGSRTLDAAATAPGRTLGVGAAAAAPSFGRGSFGHAV
Sbjct: 1 MSTPGAAWRRNGSRTLDAAATAPGRTLGVGAAAAAPSFGRGSFGHAVGLPPPPRSRGHGR 60
Query: 61 XSVAAATTVPAFSIDGSVGGDFTSSIGPHASSQPWFDAAGGDPSSPGSWDQDVRPPGGFM 120
SVAAATTVPAFSIDGSVGGDFTSSIGPHASSQPWFDAAGGDPSSPGSWDQDVRPPGGFM
Sbjct: 61 GSVAAATTVPAFSIDGSVGGDFTSSIGPHASSQPWFDAAGGDPSSPGSWDQDVRPPGGFM 120
Query: 121 SYFGNEAQNSHLVGAVIHMSPLNQAHNGSSPPEVEILHGNDSVRTEKRIMWTPDEDVRVM 180
SYFGNEAQNSHLVGAVIHMSPLNQAHNGSSPPEVEILHGNDSVRTEKRIMWTPDEDVRVM
Sbjct: 121 SYFGNEAQNSHLVGAVIHMSPLNQAHNGSSPPEVEILHGNDSVRTEKRIMWTPDEDVRVM 180
Query: 181 SAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPLRRRNAKQCKDRWNKINKWTDLFEC 240
SAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPLRRRNAKQCKDRWNKINKWTDLFEC
Sbjct: 181 SAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPLRRRNAKQCKDRWNKINKWTDLFEC 240
Query: 241 AYAKARRVFTSGYSAEMWLDAAHKFYVDDNKECKDVVGPYMLTEVWKICRDVPKWKTYNE 300
AYAKARRVFTSGYSAEMWLDAAHKFYVDDNKECKDVVGPYMLTEVWKICRDVPKWKTYNE
Sbjct: 241 AYAKARRVFTSGYSAEMWLDAAHKFYVDDNKECKDVVGPYMLTEVWKICRDVPKWKTYNE 300
Query: 301 NLKNARKRKAFHLEGESEENEDTCDQMPQRPIGQXXXXXXXXXXXXXXXXXXXXXXXXXX 360
NLKNARKRKAFHLEGESEENEDTCDQMPQRPIGQ
Sbjct: 301 NLKNARKRKAFHLEGESEENEDTCDQMPQRPIGQKAAKKAALAAKNGKLKGSSSSDDGHS 360
Query: 361 XXXPIELDKFDRYSKF 376
PIELDKFDRYSKF
Sbjct: 361 KDSPIELDKFDRYSKF 376
>Os01g0549300 Homeodomain-like containing protein
Length = 389
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/309 (64%), Positives = 231/309 (74%), Gaps = 22/309 (7%)
Query: 74 IDGSVGGDFTSSIGPHASSQPWFDAAGGDPSSPGSWDQDVRPPGGFMSYFGNEAQNSHLV 133
DGS G F SS W DA+GGD SSPGSWD+DV P GGFMSYFGN AQNSHLV
Sbjct: 10 FDGSYRGGF-------PSSSAWLDASGGDESSPGSWDKDVHPRGGFMSYFGNHAQNSHLV 62
Query: 134 GAVIHMSPLNQAHNGSSPPEVEILHGNDS------VRTEKRIMWTPDEDVRVMSAWLEHS 187
GA I+++ + SSPPEVEIL GND VRTEKRI+WT +ED+ +MSAW+EHS
Sbjct: 63 GAPIYIA------DASSPPEVEILQGNDDGNGNGNVRTEKRILWTEEEDIILMSAWIEHS 116
Query: 188 TDFTCGADKGGVQYWGEVVETYNKTTPPLRRRNAKQCKDRWNKINKWTDLFECAYAKARR 247
TD TCGADKGG QYWGEVVE+YNKTTPPLR+RN KQCKDRW+KIN+WTDLFECAY KARR
Sbjct: 117 TDSTCGADKGGGQYWGEVVESYNKTTPPLRKRNLKQCKDRWHKINRWTDLFECAYVKARR 176
Query: 248 VFTSGYSAEMWLDAAHKFYVDDNKECKDVVGPYMLTEVWKICRDVPKWKTYNENLKNARK 307
+FTSGYS +MW+DAAHKFYVDDNKE K +GP++L EVWKICR+V KWKTYN+NL+NARK
Sbjct: 177 IFTSGYSNQMWIDAAHKFYVDDNKEAK--LGPFVLMEVWKICREVSKWKTYNDNLRNARK 234
Query: 308 RKAFHLEGESEENEDTCDQMPQRPIGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIEL 367
RK+FHLEG+SEE +DT D+MP+RP+GQ PI+L
Sbjct: 235 RKSFHLEGDSEEADDTFDEMPKRPMGQ-KAAKKAALDAKIKSNGLGSSDDGHSKESPIQL 293
Query: 368 DKFDRYSKF 376
DKFDRYSKF
Sbjct: 294 DKFDRYSKF 302
>Os08g0178900 Homeodomain-like containing protein
Length = 389
Score = 397 bits (1020), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/309 (64%), Positives = 231/309 (74%), Gaps = 22/309 (7%)
Query: 74 IDGSVGGDFTSSIGPHASSQPWFDAAGGDPSSPGSWDQDVRPPGGFMSYFGNEAQNSHLV 133
DGS G F SS W DA+GGD SSPGS D+DV P GGFMSYFGN AQNSHLV
Sbjct: 10 FDGSYRGGF-------PSSSAWLDASGGDESSPGSCDKDVHPRGGFMSYFGNHAQNSHLV 62
Query: 134 GAVIHMSPLNQAHNGSSPPEVEILHGNDS------VRTEKRIMWTPDEDVRVMSAWLEHS 187
GA I+++ + SSPPEVEIL GND VRTEKRI+WT +ED+R+MSAW+EHS
Sbjct: 63 GAPIYIA------DASSPPEVEILQGNDDGNGNGNVRTEKRILWTEEEDIRLMSAWIEHS 116
Query: 188 TDFTCGADKGGVQYWGEVVETYNKTTPPLRRRNAKQCKDRWNKINKWTDLFECAYAKARR 247
TD TCGADKGG QYWGEVVE+YNKTTPPLR+RN KQCKDRW+KIN+WTDLFECAY KARR
Sbjct: 117 TDSTCGADKGGGQYWGEVVESYNKTTPPLRKRNLKQCKDRWHKINRWTDLFECAYVKARR 176
Query: 248 VFTSGYSAEMWLDAAHKFYVDDNKECKDVVGPYMLTEVWKICRDVPKWKTYNENLKNARK 307
+FTSGYS +MW+DAAHKFYVDDNKE K +GP++L EVWKICR+V KWKTYNEN++NARK
Sbjct: 177 IFTSGYSNQMWIDAAHKFYVDDNKEAK--LGPFVLMEVWKICREVSKWKTYNENMRNARK 234
Query: 308 RKAFHLEGESEENEDTCDQMPQRPIGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIEL 367
RK+FHLEG+SEE +DT D+MP+RP+GQ PI+L
Sbjct: 235 RKSFHLEGDSEEADDTFDEMPKRPMGQ-KAAKKAALDAKIKSNGLGSSDDGHSKESPIQL 293
Query: 368 DKFDRYSKF 376
DKFDRYSKF
Sbjct: 294 DKFDRYSKF 302
>Os06g0716600
Length = 542
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 145/232 (62%), Gaps = 29/232 (12%)
Query: 117 GGFMSYFGNEAQNSHLVGAVIHMSPLNQAHNGSSPP-------EVEILHGNDSVRTEKRI 169
GGF FGN Q+ S NQ+ + S P V + G+++ RTEKRI
Sbjct: 95 GGF---FGNAGQSP---------SDQNQSEDDYSTPISARDNTYVNVDSGDETPRTEKRI 142
Query: 170 MWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPLRRRNAKQCKDRWN 229
WT +EDVR+MS+WL +STD T GAD+ QYW +V TYN+TTP RRRNAKQ KDR++
Sbjct: 143 FWTQEEDVRMMSSWLLNSTDSTVGADRKNEQYWTDVEATYNETTPSHRRRNAKQIKDRFH 202
Query: 230 KINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDNKECKDVVGPYMLTEVWKIC 289
K+NKWTDLF A+ KAR ++TSGY+ +MW++ AH FY+ DN++ +GP++L EVW
Sbjct: 203 KVNKWTDLFHSAWLKARMIYTSGYNDQMWIEKAHVFYIKDNEKLN--LGPFVLMEVWNTV 260
Query: 290 RDVPKWKTYNENLKNARKRKAFHLEGESEENEDT-------CDQMPQRPIGQ 334
+ KW TYN LK ARKR A G+ +E ED+ D+ P RP+GQ
Sbjct: 261 KTEAKWITYNNGLKAARKRIATKGLGKEKEGEDSSPLYVDELDEQP-RPMGQ 311
>Os11g0635000 Hypothetical protein
Length = 195
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/115 (86%), Positives = 100/115 (86%)
Query: 1 MSTPGAAWRRNGSRTLDAAATAPGRTLGVGAAAAAPSFGRGSFGHAVXXXXXXXXXXXXX 60
MSTPGAAW RNGSRTLDAAATAPGRTLGVGAAAAAPSFGRGSFGHAV
Sbjct: 1 MSTPGAAWSRNGSRTLDAAATAPGRTLGVGAAAAAPSFGRGSFGHAVGLPPPPHSRGRSH 60
Query: 61 XSVAAATTVPAFSIDGSVGGDFTSSIGPHASSQPWFDAAGGDPSSPGSWDQDVRP 115
SVAAATTVPAFSIDGSVGGDFTSSIGPHASSQPWFDAAGGDPSSPGSWDQDVRP
Sbjct: 61 GSVAAATTVPAFSIDGSVGGDFTSSIGPHASSQPWFDAAGGDPSSPGSWDQDVRP 115
>Os10g0449100
Length = 424
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 116/237 (48%), Gaps = 29/237 (12%)
Query: 112 DVRPPGGFMSYFGNEAQNSHLVGAVIHM--------------SPLNQAHNGSSPPEVEIL 157
D+ PPGGF+S Q + V+ + S A + S V L
Sbjct: 76 DIHPPGGFLSML-QTGQQPLVPPHVLFLATWPPMPPMAPTTNSGTTHARSRSKAKPVINL 134
Query: 158 HGNDSVRTEKRIMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPLR 217
D VRT KR+ W DED+R++SAWL HS D G K YWG+VVE YN TTP R
Sbjct: 135 DDGDDVRTAKRLTWASDEDLRLVSAWLYHSNDPINGNGKKNESYWGDVVELYNSTTPINR 194
Query: 218 RRNAKQCKDRWNKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDNKECKDVV 277
+R K KDRW +I +W F ++ KA V+TSGYS + D A++FYVDD
Sbjct: 195 KREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVDDYPN----E 250
Query: 278 GPYMLTEVWKICRDVPKWKTYNENLKNARKRKAFHLEGESEENEDTCDQMPQRPIGQ 334
GP+ + WK+ RD PKW E L+ KR +D D + Q+ IG+
Sbjct: 251 GPFTVLHCWKVLRDEPKWHAVLEELEKPHKRSL----------DDGSDTLSQKDIGE 297
>Os01g0821200
Length = 356
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 119/244 (48%), Gaps = 27/244 (11%)
Query: 104 SSPGSWDQDVRPPGGFMSYFGNEAQNS---HLV----------GAVIHMSPLNQAHNGSS 150
SS G+ D+ PPGGF+S Q H++ A S A + S
Sbjct: 15 SSNGAIGMDIHPPGGFLSMLQTGQQPLVPPHVLFPATWPPMPPMAPATNSGTTHARSRSK 74
Query: 151 PPEVEILHGNDSVRTEKRIMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYN 210
V L D+VRT KR+ W DED+R++SAWL HS D G K Y G+VVE YN
Sbjct: 75 AKPVINLDDGDNVRTAKRLTWASDEDLRLVSAWLYHSNDPINGNGKKNESYRGDVVELYN 134
Query: 211 KTTPPLRRRNAKQCKDRWNKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDN 270
TTP R+R K KD+W +I +W F ++ KA V+TSGYS + D A++FYV+D
Sbjct: 135 NTTPINRKREVKHLKDQWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVNDY 194
Query: 271 KECKDVVGPYMLTEVWKICRDVPKWKTYNENLKNARKRKAFHLEGESEENEDTCDQMPQR 330
GP+ + WK+ D PKW E L+ KR +D D + Q+
Sbjct: 195 PNE----GPFTVLHYWKVLHDEPKWHAVLEELEKPHKRSL----------DDGSDTLSQK 240
Query: 331 PIGQ 334
IG+
Sbjct: 241 DIGE 244
>Os01g0527800
Length = 484
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 117/236 (49%), Gaps = 16/236 (6%)
Query: 84 SSIGPHASSQPWFDAAGGDPSSPGSWDQDVRPPGGFMSYFGNEA--QNSHLVGA-----V 136
+S P A + D + D S D PPGGF+SYF + + QN
Sbjct: 59 ASAFPMAQMKQGLDRSAIDLSDLQERGMDFHPPGGFLSYFQDPSILQNHRPFVPPNYYPA 118
Query: 137 IHMSPLNQAHNGSSPPEVEILHGND---SVRTEKRIMWTPDEDVRVMSAWLEHSTDFTCG 193
++P ++ H G+ P V I G++ +VRTEKR+ W+ +ED+R++SAWL +S D G
Sbjct: 119 EQVAPCSKLHPGAQQP-VNIDSGDEEAPNVRTEKRLTWSTEEDIRLVSAWLNNSNDSISG 177
Query: 194 ADKGGVQYWGEVVETYNKTTPPLRRRNAKQCKDRWNKINKWTDLFECAYAKARRVFTSGY 253
K YWG+V YN TTP R R KQ KDR++KI K F C Y + + ++ +G
Sbjct: 178 NFKKNDCYWGDVTAEYNSTTPKNRTRQEKQIKDRFHKIKKNVGRFCCVYKEVKSIYVNGQ 237
Query: 254 SAEMWLDAAHKFYVDDNKECKDVVGPYMLTEVWKICRDVPKWKTYNENLKNARKRK 309
+ + A Y D KE GP+ W I RD PKW Y E L+ K K
Sbjct: 238 NDMQLREKAEAAYQADYKE-----GPFSFLHCWNILRDQPKWHAYLEELEKPNKPK 288
>Os06g0521000 Homeodomain-like containing protein
Length = 291
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 118/236 (50%), Gaps = 16/236 (6%)
Query: 84 SSIGPHASSQPWFDAAGGDPSSPGSWDQDVRPPGGFMSYFGNEA--QNSHLV-----GAV 136
+S P A + D + D S D PPGGF+SYF + + QN
Sbjct: 59 ASAFPMAQMKQGLDRSAIDLSDLQERGMDFHPPGGFLSYFQDPSILQNHRPFVPPNYYPA 118
Query: 137 IHMSPLNQAHNGSSPPEVEILHGND---SVRTEKRIMWTPDEDVRVMSAWLEHSTDFTCG 193
++P ++ G+ P V I G++ +VRTEKR+ W+ +ED+R++SAWL +S D G
Sbjct: 119 EQVAPCSKLRPGAQQP-VNIDSGDEEAHTVRTEKRLTWSTEEDIRLVSAWLNNSNDSISG 177
Query: 194 ADKGGVQYWGEVVETYNKTTPPLRRRNAKQCKDRWNKINKWTDLFECAYAKARRVFTSGY 253
K +YWG+V YN TTP R R KQ KDR++KI K F C Y + + ++ SG
Sbjct: 178 NFKKNDRYWGDVTAEYNSTTPKNRTRQEKQIKDRFHKIKKNVGRFCCVYKEVKSIYVSGQ 237
Query: 254 SAEMWLDAAHKFYVDDNKECKDVVGPYMLTEVWKICRDVPKWKTYNENLKNARKRK 309
+ + A Y D KE GP+ W I RD PKW +Y E L+ K K
Sbjct: 238 NDMQLREKAEAAYQADYKE-----GPFSFLHCWNILRDQPKWHSYLEELEKPNKPK 288
>Os11g0282700 Homeodomain-like containing protein
Length = 514
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 27/220 (12%)
Query: 112 DVRPPGGFMSYFGN-EAQNSHLVGAVI-----------------HMSPLNQAHNGSSPPE 153
D RPPGGF+SYF + + +H + + SP+ ++ G P
Sbjct: 99 DSRPPGGFLSYFQDPSSLQNHQPSIPLNYYATQQAAPWAPSPAEYRSPVTKSGPGEQHP- 157
Query: 154 VEILHGND---SVRTEKRIMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYN 210
+ I G + +VRTEKR+ WT +ED+R++SAWL + D G K YWG+V YN
Sbjct: 158 INIDSGGEETPTVRTEKRLTWTHEEDIRLVSAWLNNLNDSINGNFKKNDCYWGDVTTAYN 217
Query: 211 KTTPPLRRRNAKQCKDRWNKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDN 270
TTP R R KQ KDR++KI K F CAY + + ++ SG + ++ H Y D
Sbjct: 218 STTPRNRMRQEKQIKDRFHKIKKNVGRFCCAYKEVKSIYVSGQNELQLMEKVHATYEADY 277
Query: 271 KECKDVVGPYMLTEVWKICRDVPKWKTYNENLKNARKRKA 310
KE G + WK RD PKW Y E L+ K K+
Sbjct: 278 KE-----GQFTFLHCWKALRDQPKWHAYLEELEKPNKTKS 312
>Os09g0241700 Homeodomain-like containing protein
Length = 315
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 102/197 (51%), Gaps = 18/197 (9%)
Query: 114 RPPGGFMSYFGNEAQNSHLVGAVIHMSPLNQAHNGSSPPEVEILHGNDSVRTEKRIMWTP 173
RPPGGF+++ + + H V GS + +++G+ RT+KR+ W
Sbjct: 12 RPPGGFVNFINTPSNHVHHVAE------------GSPSQPINVVNGH-VARTDKRLSWMK 58
Query: 174 DEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPLRRRNAKQCKDRWNKINK 233
DED+R++SAWL +S D K +YWG+V YN TTP R R KQ KDR+ KI K
Sbjct: 59 DEDLRLISAWLNNSNDPIESNFKKNDKYWGDVAAAYNSTTPKNRARLVKQVKDRFGKIRK 118
Query: 234 WTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDNKECKDVVGPYMLTEVWKICRDVP 293
F C++ + ++ SG S E ++ A K Y +D K+ GP++ W + P
Sbjct: 119 KVGNFCCSWKEVNSLYASGESNEDLMNKAQKIYENDFKD-----GPFLFMHCWNELKKQP 173
Query: 294 KWKTYNENLKNARKRKA 310
KW Y E L + KRKA
Sbjct: 174 KWHAYLEQLDKSNKRKA 190
>Os01g0385600 Homeodomain-like containing protein
Length = 211
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 97/194 (50%), Gaps = 15/194 (7%)
Query: 109 WDQDVRPPGGFMSYFGNEAQNSHLVGAVIHMSPLNQAHNGSSPPEVEILHGNDSVRTEKR 168
W + RP GG + + N H V + P+N VE + +S RTEKR
Sbjct: 24 WGLESRPLGGLVDFIKNTTDPMHHVTEGCQLQPIN----------VENGNNGNSTRTEKR 73
Query: 169 IMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPLRRRNAKQCKDRW 228
+ W+ +ED+R++SAWL +S D K +YW +V YN TTP R R KQ KDR+
Sbjct: 74 LGWSTEEDLRLVSAWLNNSNDPIESNFKKNDKYWADVAAAYNSTTPSSRFRQVKQVKDRF 133
Query: 229 NKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDNKECKDVVGPYMLTEVWKI 288
+KI K F C++ +A ++ SG + A K Y +D K+ GP++LT+ W
Sbjct: 134 SKIKKKVGNFCCSWKEANSLYASGECNVDLMAKAQKIYENDFKD-----GPFLLTQCWNE 188
Query: 289 CRDVPKWKTYNENL 302
+ PK Y + L
Sbjct: 189 LKTQPKCHAYLDQL 202
>Os01g0261900
Length = 193
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 86/164 (52%), Gaps = 13/164 (7%)
Query: 109 WDQDVRPPGGFMSYFGNEAQNSHLVGAVIHMSPLNQAHNGSSPPEVEILHGNDSVRTEKR 168
W + RPPGGF++ + + H V P+N NG D RT+KR
Sbjct: 26 WGVESRPPGGFVNLINAPSNHMHHVAEGSPSQPIN-VENG------------DISRTKKR 72
Query: 169 IMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPLRRRNAKQCKDRW 228
++WT DED+R++SAWL +S D K +YWG+V YN TTP R R KQ KDR+
Sbjct: 73 LLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKSRVRQVKQVKDRF 132
Query: 229 NKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDNKE 272
KI K F C++ +A ++ SG S + + A K Y +D K+
Sbjct: 133 GKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYENDFKD 176
>Os11g0514200
Length = 409
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 164 RTEKRIMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPL-RRRNAK 222
R RI WT D+++R+MS+WL +S D G DK QYW V +N P +RN K
Sbjct: 156 RRGTRINWTEDDNIRLMSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPK 215
Query: 223 QCKDRWNKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDNKECKDVVGPYML 282
QC+ W+ + + F Y+KAR FTSGYS +M ++ A ++Y N + P+ L
Sbjct: 216 QCRTHWDNVKRDVTKFCGFYSKARTTFTSGYSDDMIMEKAREWYKKHNNQ-----KPFTL 270
Query: 283 TEVWKICRDVPKWKTYNENLKNARKRK 309
+WK +D PKW+ E + ++ K
Sbjct: 271 EYMWKDLKDQPKWRRVLEESSHNKRNK 297
>Os06g0534700
Length = 409
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 164 RTEKRIMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPL-RRRNAK 222
R RI WT D+++R+MS+WL +S D G DK QYW V +N P +RN K
Sbjct: 156 RRGTRINWTEDDNIRLMSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPK 215
Query: 223 QCKDRWNKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDNKECKDVVGPYML 282
QC+ W+ + + F Y+KAR FTSGYS +M ++ A ++Y N + P+ L
Sbjct: 216 QCRTHWDNVKRDVTKFCGFYSKARTTFTSGYSDDMIMEKAREWYKKHNNQ-----KPFTL 270
Query: 283 TEVWKICRDVPKWKTYNENLKNARKRK 309
+WK +D PKW+ E + ++ K
Sbjct: 271 EYMWKDLKDQPKWRRVLEESSHNKRSK 297
>Os10g0563100
Length = 390
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 88 PHASSQPWFDAAGGDPSSPGSWDQDVRPPGGFMSYFGNEAQN---SHLVGAVIHMSPLNQ 144
PH +S FD A D D+ PPGGF+S + Q H++
Sbjct: 65 PHTNS---FDPASSDCG------MDIHPPGGFLSMLQSGQQPLVPPHVLFPATWPPMPPM 115
Query: 145 AHNGSSPPEVEILHGNDSVRTEKRIMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGE 204
A +S + + G+D VRT KR+ W DED+R
Sbjct: 116 APTTNSGTIINLDDGDD-VRTAKRLTWASDEDLR-------------------------- 148
Query: 205 VVETYNKTTPPLRRRNAKQCKDRWNKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHK 264
TTP R+R K KDRW +I +W F ++ KA V+TSGYS + D A++
Sbjct: 149 -------TTPINRKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQ 201
Query: 265 FYVDDNKECKDVVGPYMLTEVWKICRDVPKWKTYNENLKNARKRKAFHLEGESEENEDTC 324
FYVDD GP+ + WK+ RD PKW E L+ KR +D
Sbjct: 202 FYVDDYPN----EGPFTVLHCWKVLRDEPKWHAVLEELEKPHKRSL----------DDGS 247
Query: 325 DQMPQRPIGQ 334
D + Q+ IG+
Sbjct: 248 DTLSQKDIGE 257
>Os02g0466700
Length = 686
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 7/162 (4%)
Query: 164 RTEKRIMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYN-KTTPPLRRRNAK 222
R R+ WT +E++R++S+WL +S D G DK YW V +N T+ R+R
Sbjct: 410 RRGTRVNWTEEENIRLLSSWLNNSVDPINGNDKKAEYYWKAVAVEFNSNTSRSNRKRTVV 469
Query: 223 QCKDRWNKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDNKECKDVVGPYML 282
QCK W + K F AY++AR F+SGYS +M ++ AH + +N E P+ L
Sbjct: 470 QCKTHWGGVKKEIGKFCGAYSRARSTFSSGYSDDMIMEKAHIMFKSENNE-----KPFTL 524
Query: 283 TEVWKICRDVPKW-KTYNENLKNARKRKAFHLEGESEENEDT 323
+W+ +D PKW + E+ KN R + + S N+DT
Sbjct: 525 EYMWRELKDQPKWRRVLEEDSKNKRTKISESGAYTSSSNQDT 566
>Os11g0506300
Length = 438
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 59/77 (76%)
Query: 154 VEILHGNDSVRTEKRIMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYNKTT 213
V + G+++ RTEKRI WT +EDVR+MS+WL +STD T GAD+ QYW +V TYN+TT
Sbjct: 127 VNVDSGDETPRTEKRIFWTQEEDVRMMSSWLLNSTDSTVGADRKNEQYWTDVEATYNETT 186
Query: 214 PPLRRRNAKQCKDRWNK 230
P RRRNAKQ KDR++K
Sbjct: 187 PSHRRRNAKQIKDRFHK 203
>Os04g0286500 Homeodomain-like containing protein
Length = 417
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 141 PLNQAHNGSSPPEVEILHGNDSVRTEKRIMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQ 200
P Q N E + ++ R + WT +E++R++S+WL +S D G DK G
Sbjct: 124 PARQEENNLVNIEESSDNSQETGRRGTHVNWTEEENLRLLSSWLNNSLDSINGNDKKGEY 183
Query: 201 YWGEVVETYN-KTTPPLRRRNAKQCKDRWNKINKWTDLFECAYAKARRVFTSGYSAEMWL 259
YW +V +N + R+R QCK W + K F AY++ARR ++SG+S +M +
Sbjct: 184 YWRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIM 243
Query: 260 DAAHKFYVDDNKECKDVVGPYMLTEVWKICRDVPKW-KTYNENLKNARKR---KAFHLEG 315
+ AH Y +N + + L +W+ +D PKW + E+ KN R + +
Sbjct: 244 EKAHALYKSENND-----KTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISESGAYTSS 298
Query: 316 ESEENEDTCDQMPQRPIGQ 334
++E E+ + +RP GQ
Sbjct: 299 SNQETEEETSRKEKRPEGQ 317
>Os10g0410300 Homeodomain-like containing protein
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 168 RIMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPL-RRRNAKQCKD 226
RI WT +E++ ++S W+ +STD G D+ YW V + +N + P +R+ KQ K
Sbjct: 57 RINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKT 116
Query: 227 RWNKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDNKECKDVVGPYMLTEVW 286
W + + F Y + + + SG S +M +++AH + +NK+ P+ L +W
Sbjct: 117 HWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKD-----KPFTLEYMW 171
Query: 287 KICRDVPKW-KTYNENLKNARKRK 309
+ +D+PKW + E+ N R ++
Sbjct: 172 REVKDLPKWCRIVQEDSGNKRTKE 195
>Os07g0575300
Length = 361
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 193 GADKGGVQYWGEVVETYNKTTPPL-RRRNAKQCKDRWNKINKWTDLFECAYAKARRVFTS 251
G DK QYW V +N P +RN KQC+ W+ + + F Y+KAR FTS
Sbjct: 116 GNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQCRTHWDNVKRDVTKFCGFYSKARTTFTS 175
Query: 252 GYSAEMWLDAAHKFYVDDNKECKDVVGPYMLTEVWKICRDVPKWKTYNENLKNARKRK 309
GYS +M ++ A ++Y N + P+ L +WK +D PKW+ E + ++ K
Sbjct: 176 GYSDDMIMEKACEWYKKHNNQ-----KPFTLEYMWKDLKDQPKWRRVLEESSHNKRNK 228
>Os09g0318600 Homeodomain-like containing protein
Length = 527
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 23/186 (12%)
Query: 158 HGNDSVRTEK---RIMWTPDEDVRVMSAWL-EHSTDFTCGADKGGVQYWGEVVETYNKTT 213
G D+ EK R+ WT ED+R++SAWL + TD +YW +VV YN T
Sbjct: 112 QGTDNAEPEKATKRLYWTEKEDIRLISAWLIYYKTD----------RYWEKVVAEYNSTI 161
Query: 214 PPLRRRNAKQCKDRWNKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDNKEC 273
P RRR + K W+KI + F + + + + SG+S M L K ++ N+E
Sbjct: 162 PATRRRELQHVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQL--MDKTWLMYNEEA 219
Query: 274 K-----DVVGPYMLTEVWKICRDVPKWKTYNENLKNARKRKAFHLEGESEENEDTCDQMP 328
+ + + WK + PKWK Y L R ++ E S +ED+ ++MP
Sbjct: 220 RVMYLEEAEHNFAFDHCWKAVWNQPKWKAYMSCLFTKRTMQSDSWEYMS-SSEDS-EEMP 277
Query: 329 QRPIGQ 334
+ IG+
Sbjct: 278 GKEIGE 283
>Os09g0317700 Homeodomain-like containing protein
Length = 495
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 67/146 (45%), Gaps = 28/146 (19%)
Query: 164 RTEKRIMWTPDEDVRVMSAWL-EHSTDFTCGADKGGVQYWGEVVETYNKTTPPLRRRNAK 222
RT +R+ WT +ED+R++S WL + TD +YW +V YN TP RRR K
Sbjct: 121 RTARRLAWTEEEDIRLISTWLINYKTD----------KYWDKVAAEYNSATPGARRREVK 170
Query: 223 QCKDRWNK-INKWTDLFECAYAKARRVFTSGYSAEM------WL---DAAHKFYVDDNKE 272
K+RW + INK +C + + + SG S M WL AH Y+++ K
Sbjct: 171 HLKNRWQRMINKVAHFNDC-WCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKH 229
Query: 273 CKDVVGPYMLTEVWKICRDVPKWKTY 298
+ W D PKWK Y
Sbjct: 230 ------KFTFGHCWNAVWDQPKWKEY 249
>Os05g0348300
Length = 1220
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 114 RPPGGFMSYFGNEAQNSHLVGAVIHMSPLNQAHNGSSPPEVEILHGNDSVRTEKRIMWTP 173
RP GG + + N H V + P+N VE + ++ RTEK + W+
Sbjct: 1025 RPLGGLVDFIKNTTNPMHHVTEGCQLQPIN----------VENGNNGNATRTEKHLGWST 1074
Query: 174 DEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPLRRRNAKQ 223
+ED+R++SAWL +S + K +YW +V YN TTP R R KQ
Sbjct: 1075 EEDLRLVSAWLNNSNNPIELNFKKNDKYWADVAAAYNSTTPSSRFRQVKQ 1124
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.132 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,369,038
Number of extensions: 660115
Number of successful extensions: 2143
Number of sequences better than 1.0e-10: 26
Number of HSP's gapped: 2106
Number of HSP's successfully gapped: 26
Length of query: 376
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 274
Effective length of database: 11,709,973
Effective search space: 3208532602
Effective search space used: 3208532602
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)