Os01g0527800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os01g0527800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.57 | 0.314 | 3.16 | -0.0216 | 0.178 | 0.127 | -0.596 | 0.904 | -0.0237 | 7.67 | 4.729 | 10 | -- | -- |
| 45.77 | 0.318 | 3.16 | -0.00372 | 0.16 | 0.221 | -0.536 | -- | -0.0212 | 5.76 | 1.723 | 6 | -- | -- |
| 45.29 | 0.316 | 3.16 | -0.0233 | 0.178 | 0.14 | -- | 0.706 | -0.0199 | 7.73 | 8.062 | 9 | -- | -- |
| 46.27 | 0.319 | 3.16 | -0.00398 | 0.178 | 0.129 | -- | -- | -0.0181 | 7.8 | 4.5 | 9 | -- | -- |
| 46.83 | 0.32 | 3.16 | -0.0193 | -- | 0.209 | -- | 0.662 | -0.0171 | -- | 2.024 | 9 | -- | -- |
| 46.49 | 0.32 | 3.16 | 0.00218 | 0.211 | -- | -0.128 | -- | -0.0192 | 8.53 | -- | -- | -- | -- |
| 46.52 | 0.319 | 3.16 | -0.00111 | 0.21 | -- | -- | -- | -0.0188 | 8.85 | -- | -- | -- | -- |
| 47.72 | 0.323 | 3.16 | -0.00226 | -- | 0.207 | -- | -- | -0.0156 | -- | -0.005284 | 4 | -- | -- |
| 46.27 | 0.319 | 3.16 | -- | 0.178 | 0.129 | -- | -- | -0.0177 | 7.81 | 4.5 | 9 | -- | -- |
| 49.04 | 0.327 | 3.16 | -0.00103 | -- | -- | -- | -- | -0.0173 | -- | -- | -- | -- | -- |
| 46.52 | 0.319 | 3.16 | -- | 0.21 | -- | -- | -- | -0.0187 | 8.85 | -- | -- | -- | -- |
| 47.72 | 0.323 | 3.16 | -- | -- | 0.207 | -- | -- | -0.0154 | -- | -1.619 | 4 | -- | -- |
| 49.04 | 0.327 | 3.16 | -- | -- | -- | -- | -- | -0.0171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.65 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 2 | 43.71 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 7 | 5 |
| 3 | 43.73 | radiation | 10.0 | 90 | > th | dose dependent | sin | 8 | NA |
| 6 | 43.74 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 8 | 43.76 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 9 |
| 9 | 43.76 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 10 | 43.78 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 20 | 43.80 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 7 |
| 22 | 43.80 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 27 | 43.82 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 7 |
| 31 | 43.84 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 33 | 43.85 | radiation | 10.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 36 | 43.86 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 3 | 4 |
| 38 | 43.87 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 43 | 43.89 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 46 | 43.89 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 47 | 43.89 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 3 | 8 |
| 48 | 43.89 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 3 | 9 |
| 51 | 43.90 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 15 |
| 63 | 43.92 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 11 |
| 69 | 43.92 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 6 | 5 |
| 71 | 43.92 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 6 | 6 |
| 88 | 43.93 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 9 | 2 |
| 104 | 43.95 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 113 | 43.95 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 24 | 11 |
| 124 | 43.96 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 149 | 43.97 | radiation | 20.0 | 90 | < th | dose independent | rect. | 23 | 10 |
| 174 | 43.98 | radiation | 20.0 | 90 | > th | dose independent | sin | 8 | NA |
| 189 | 43.99 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 229 | 44.02 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 240 | 44.03 | humidity | 80.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 252 | 44.04 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 23 | 10 |
| 267 | 44.06 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 273 | 44.06 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 23 | 10 |
| 275 | 44.07 | humidity | 90.0 | 270 | < th | dose independent | sin | 6 | NA |
| 276 | 44.07 | temperature | 20.0 | 30 | > th | dose independent | rect. | 3 | 4 |
| 326 | 44.09 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 342 | 44.10 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 346 | 44.10 | radiation | 40.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 360 | 44.11 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 5 | 3 |
| 392 | 44.11 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 3 | 15 |
| 408 | 44.12 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 8 |
| 411 | 44.12 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 13 |
| 428 | 44.12 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 443 | 44.13 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 451 | 44.13 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 3 |
| 468 | 44.13 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 7 | 20 |
| 500 | 44.15 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 528 | 44.16 | humidity | 90.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 529 | 44.16 | radiation | 20.0 | 90 | > th | dose independent | rect. | 7 | 4 |
| 565 | 44.17 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 9 | 2 |
| 566 | 44.17 | wind | 5.0 | 30 | < th | dose dependent | rect. | 3 | 4 |
| 583 | 44.18 | radiation | 20.0 | 90 | < th | dose independent | rect. | 23 | 12 |
| 613 | 44.19 | radiation | 40.0 | 10 | < th | dose dependent | sin | 4 | NA |
| 615 | 44.19 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 650 | 44.20 | atmosphere | 1000.0 | 30 | > th | dose independent | sin | 3 | NA |
| 665 | 44.20 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 23 | 12 |
| 666 | 44.20 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 725 | 44.23 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 726 | 44.23 | humidity | 70.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 732 | 44.23 | temperature | 15.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 735 | 44.23 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 753 | 44.24 | radiation | 1.0 | 270 | < th | dose independent | sin | 5 | NA |
| 755 | 44.24 | wind | 3.0 | 30 | < th | dose independent | rect. | 3 | 4 |
| 760 | 44.24 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 13 |
| 761 | 44.24 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 784 | 44.25 | radiation | 20.0 | 90 | > th | dose independent | rect. | 9 | 2 |
| 817 | 44.26 | radiation | 10.0 | 10 | < th | dose independent | rect. | 16 | 17 |
| 827 | 44.26 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 847 | 44.27 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 4 |
| 848 | 44.27 | radiation | 10.0 | 10 | > th | dose independent | rect. | 7 | 5 |
| 855 | 44.27 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 858 | 44.27 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 2 |
| 865 | 44.27 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 4 |
| 868 | 44.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 890 | 44.28 | radiation | 10.0 | 10 | > th | dose independent | sin | 5 | NA |
| 891 | 44.28 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 892 | 44.28 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 898 | 44.28 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 11 |
| 901 | 44.28 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 20 |
| 905 | 44.28 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 908 | 44.28 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 961 | 44.28 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 20 |
| 963 | 44.29 | radiation | 20.0 | 90 | < th | dose independent | sin | 6 | NA |
| 964 | 44.29 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 7 | 3 |
| 968 | 44.29 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 6 |
| 992 | 44.29 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 996 | 44.29 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 9 | 3 |
| 999 | 44.29 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 3 | 4 |