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Os09g0317700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Homeodomain-like containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.55 (0.026) R2 : 0.748
β1 : 2.58 (0.0951) R2dD : 0.423 R2D : 0.347
β2 : 1.7 (0.067) R2dC : 0.357 R2C : 0.32
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.484 (0.0555) R2dN8 : 0.0566 R2N8 : -0.0154
σ : 0.488
deviance : 108.76
__
_____
C
peak time of C : 16.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
83.4 0.429 6.49 2.73 1.19 -1.04 0.689 2.21 0.671 16.3 1003 2 2.5 6.48
88.85 0.442 6.5 2.64 1.18 -1.05 -0.16 -- 0.636 16.2 1003 2 2.5 6.48
84.31 0.431 6.49 2.72 1.19 -1.05 -- 1.73 0.666 16.2 1003 3 2.5 6.47
88.92 0.442 6.5 2.64 1.18 -1.05 -- -- 0.635 16.2 1003 2 2.5 6.48
126.19 0.526 6.47 2.7 -- -1.77 -- 1.36 0.708 -- 999.2 9 2.67 6.23
108.68 0.489 6.55 2.58 1.7 -- -0.175 -- 0.485 16.7 -- -- -- --
108.76 0.488 6.55 2.58 1.7 -- -- -- 0.484 16.7 -- -- -- --
127.11 0.527 6.49 2.62 -- -1.6 -- -- 0.638 -- 994.2 4 2.72 6.23
270.91 0.771 6.58 -- 1.16 -0.78 -- -- 0.288 16.3 998.7 15 2.29 6.19
261.96 0.756 6.53 2.52 -- -- -- -- 0.44 -- -- -- -- --
284.29 0.789 6.61 -- 1.65 -- -- -- 0.197 16.7 -- -- -- --
299.51 0.806 6.56 -- -- -1.48 -- -- 0.328 -- 990.4 46 1.6 6.73
428.93 0.967 6.59 -- -- -- -- -- 0.161 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 85.17 atmosphere 1000.0 10 > th dose dependent rect. 2 6
7 88.01 atmosphere 1000.0 270 > th dose dependent rect. 24 6
9 88.75 atmosphere 1005.0 30 > th dose independent rect. 2 6
18 90.05 temperature 30.0 30 < th dose dependent rect. 2 6
22 90.36 atmosphere 1000.0 270 > th dose dependent rect. 2 1
23 90.45 wind 5.0 30 < th dose independent rect. 2 6
33 91.13 atmosphere 1005.0 270 > th dose independent rect. 24 6
43 91.42 wind 9.0 10 < th dose independent rect. 8 18
52 91.73 precipitation 0.1 10 < th dose independent rect. 2 6
54 91.73 precipitation 0.1 10 < th dose dependent rect. 2 6
58 91.84 atmosphere 1005.0 270 > th dose independent rect. 1 4
61 91.91 temperature 20.0 270 < th dose independent rect. 3 2
63 91.98 temperature 30.0 270 < th dose dependent rect. 2 3
65 92.01 precipitation 0.1 30 < th dose independent rect. 8 18
66 92.01 precipitation 0.1 30 < th dose dependent rect. 8 18
72 92.13 wind 9.0 10 < th dose dependent rect. 2 6
78 92.30 temperature 10.0 10 > th dose independent rect. 2 6
80 92.30 temperature 30.0 10 < th dose independent rect. 2 6
81 92.30 humidity 50.0 10 > th dose independent rect. 2 6
83 92.30 atmosphere 995.0 10 > th dose independent rect. 2 6
84 92.30 atmosphere 1015.0 10 < th dose independent rect. 2 6
85 92.30 temperature 10.0 10 > th dose independent rect. 8 18
97 92.35 wind 9.0 1440 < th dose independent rect. 3 6
98 92.35 temperature 10.0 1440 > th dose independent rect. 3 6
101 92.35 humidity 50.0 1440 > th dose independent rect. 3 6
103 92.35 atmosphere 995.0 1440 > th dose independent rect. 3 6
104 92.35 temperature 10.0 1440 > th dose independent rect. 9 18
123 92.88 humidity 50.0 10 > th dose independent rect. 8 18
128 93.02 humidity 90.0 270 < th dose independent rect. 2 4
129 93.02 wind 5.0 270 < th dose independent rect. 24 6
130 93.02 atmosphere 995.0 30 > th dose independent rect. 8 18
137 93.11 radiation 10.0 14400 < th dose dependent rect. 23 4
141 93.16 wind 5.0 270 < th dose independent rect. 1 4
144 93.18 radiation 40.0 30 < th dose independent rect. 2 6
148 93.23 atmosphere 1005.0 270 > th dose independent rect. 2 1
163 93.54 temperature 20.0 270 < th dose dependent rect. 2 3
167 93.57 wind 9.0 30 < th dose dependent rect. 8 18
171 93.68 wind 1.0 270 > th dose independent rect. 24 6
183 93.86 wind 1.0 10 > th dose independent rect. 8 18
185 93.87 wind 7.0 270 < th dose independent rect. 6 18
195 93.97 wind 7.0 270 < th dose independent rect. 5 20
203 94.10 temperature 30.0 10 < th dose dependent rect. 22 4
210 94.17 wind 1.0 270 > th dose independent rect. 1 4
220 94.25 temperature 30.0 90 < th dose dependent rect. 2 9
221 94.26 humidity 50.0 10 > th dose dependent rect. 22 4
232 94.43 atmosphere 1015.0 270 < th dose independent rect. 23 22
239 94.48 precipitation 0.1 10 < th dose independent rect. 2 20
240 94.48 precipitation 0.1 10 < th dose dependent rect. 2 20
269 94.73 temperature 30.0 10 < th dose dependent rect. 2 20
279 94.80 precipitation 0.1 10 < th dose independent rect. 22 4
280 94.80 precipitation 0.1 10 < th dose dependent rect. 22 4
285 94.83 wind 7.0 10 < th dose independent rect. 22 4
287 94.83 temperature 10.0 10 > th dose independent rect. 22 4
288 94.83 temperature 30.0 10 < th dose independent rect. 22 4
289 94.83 humidity 50.0 10 > th dose independent rect. 22 4
292 94.83 atmosphere 995.0 10 > th dose independent rect. 22 4
293 94.83 radiation 1.0 10 < th dose independent rect. 22 4
298 94.83 wind 1.0 270 > th dose independent rect. 24 20
299 94.83 temperature 10.0 10 > th dose independent rect. 2 20
301 94.83 atmosphere 1015.0 10 < th dose independent rect. 2 20
302 94.83 wind 9.0 270 < th dose independent rect. 3 23
303 94.83 radiation 1.0 10 < th dose dependent rect. 22 4
363 95.02 temperature 10.0 1440 > th dose independent rect. 23 4
366 95.02 temperature 30.0 1440 < th dose independent rect. 23 4
370 95.02 humidity 50.0 1440 > th dose independent rect. 23 4
380 95.02 atmosphere 995.0 1440 > th dose independent rect. 23 4
381 95.02 radiation 1.0 1440 < th dose independent rect. 23 4
401 95.02 temperature 10.0 1440 > th dose independent rect. 3 20
410 95.05 atmosphere 995.0 30 > th dose dependent rect. 22 4
414 95.07 atmosphere 995.0 10 > th dose independent rect. 2 20
418 95.12 wind 7.0 270 < th dose independent rect. 5 10
461 95.37 wind 1.0 10 > th dose independent rect. 22 4
465 95.39 humidity 90.0 10 < th dose independent rect. 3 5
468 95.41 precipitation 0.1 270 < th dose independent rect. 1 4
469 95.41 precipitation 0.1 270 < th dose independent rect. 24 6
471 95.41 wind 1.0 270 > th dose independent rect. 10 10
472 95.41 precipitation 0.1 270 < th dose dependent rect. 1 4
473 95.41 precipitation 0.1 270 < th dose dependent rect. 24 6
476 95.44 humidity 90.0 30 < th dose independent rect. 3 3
479 95.45 wind 1.0 270 > th dose independent rect. 21 2
512 95.58 radiation 40.0 10 < th dose dependent rect. 2 6
514 95.59 precipitation 0.1 270 < th dose independent rect. 5 20
516 95.59 precipitation 0.1 270 < th dose dependent rect. 5 20
531 95.68 temperature 10.0 270 > th dose independent rect. 1 4
533 95.68 temperature 30.0 270 < th dose independent rect. 1 4
534 95.68 humidity 50.0 270 > th dose independent rect. 1 4
537 95.68 atmosphere 995.0 270 > th dose independent rect. 1 4
538 95.68 atmosphere 1010.0 270 < th dose independent rect. 1 4
540 95.68 radiation 20.0 270 < th dose independent rect. 1 4
543 95.68 atmosphere 1015.0 270 < th dose independent rect. 24 6
544 95.68 temperature 10.0 270 > th dose independent rect. 5 20
548 95.69 temperature 15.0 270 > th dose independent rect. 24 6
553 95.70 temperature 30.0 270 < th dose independent rect. 24 6
554 95.70 humidity 50.0 270 > th dose independent rect. 24 6
557 95.70 atmosphere 995.0 270 > th dose independent rect. 24 6
558 95.70 radiation 20.0 270 < th dose independent rect. 24 6
562 95.70 temperature 10.0 270 > th dose independent rect. 6 18
569 95.72 radiation 40.0 270 < th dose dependent rect. 1 4
571 95.73 humidity 50.0 270 > th dose dependent rect. 21 3
574 95.74 temperature 30.0 270 < th dose dependent rect. 21 2
596 95.79 atmosphere 995.0 30 > th dose dependent rect. 8 18
603 95.82 radiation 1.0 270 < th dose dependent rect. 1 4
608 95.84 precipitation 0.1 270 < th dose independent rect. 23 22
609 95.84 precipitation 0.1 270 < th dose dependent rect. 23 22
610 95.86 radiation 1.0 270 < th dose independent rect. 1 4
618 95.87 wind 9.0 270 < th dose independent rect. 20 14
637 95.91 temperature 10.0 270 > th dose independent rect. 10 10
638 95.91 atmosphere 1015.0 270 < th dose independent rect. 10 10
639 95.91 temperature 10.0 270 > th dose independent rect. 20 14
640 95.91 atmosphere 995.0 270 > th dose independent rect. 20 14
643 95.92 precipitation 0.1 270 < th dose independent rect. 21 2
644 95.92 precipitation 0.1 270 < th dose dependent rect. 21 2
652 95.94 humidity 50.0 270 > th dose independent rect. 20 14
655 95.95 wind 9.0 270 < th dose independent rect. 21 2
660 95.97 temperature 10.0 270 > th dose independent rect. 21 2
661 95.97 temperature 30.0 270 < th dose independent rect. 21 2
662 95.97 humidity 50.0 270 > th dose independent rect. 21 2
665 95.97 atmosphere 995.0 270 > th dose independent rect. 21 2
666 95.97 radiation 1.0 270 < th dose independent rect. 21 2
673 95.97 temperature 10.0 270 > th dose independent rect. 23 22
674 95.97 radiation 1.0 270 < th dose dependent rect. 21 2
680 95.98 atmosphere 995.0 270 > th dose dependent rect. 21 2
683 95.99 wind 9.0 30 < th dose independent rect. 2 20
688 95.99 radiation 40.0 270 < th dose dependent rect. 24 6
689 95.99 wind 9.0 270 < th dose dependent rect. 6 18
798 96.13 wind 9.0 30 < th dose dependent rect. 22 4
914 96.23 wind 9.0 270 < th dose dependent rect. 2 1
998 96.28 temperature 30.0 30 < th dose independent rect. 2 20