BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0317700 Os09g0317700|AK101117
(495 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0317700 Homeodomain-like containing protein 980 0.0
Os09g0318600 Homeodomain-like containing protein 653 0.0
Os06g0521000 Homeodomain-like containing protein 110 2e-24
Os01g0527800 109 4e-24
Os11g0282700 Homeodomain-like containing protein 107 2e-23
Os10g0449100 98 2e-20
Os09g0241700 Homeodomain-like containing protein 97 2e-20
Os06g0716600 93 5e-19
Os02g0466700 92 7e-19
Os01g0385600 Homeodomain-like containing protein 88 2e-17
Os04g0286500 Homeodomain-like containing protein 88 2e-17
Os01g0821200 86 9e-17
Os01g0261900 82 7e-16
Os06g0534700 80 2e-15
Os11g0514200 80 2e-15
Os10g0410300 Homeodomain-like containing protein 73 5e-13
Os08g0178900 Homeodomain-like containing protein 73 6e-13
Os01g0549300 Homeodomain-like containing protein 70 4e-12
Os01g0373400 Homeodomain-like containing protein 70 5e-12
Os10g0563100 69 1e-11
Os11g0506300 65 9e-11
>Os09g0317700 Homeodomain-like containing protein
Length = 495
Score = 980 bits (2533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/495 (95%), Positives = 471/495 (95%)
Query: 1 MGPHPPSSYSDKKTCQNVPPEKPSSTSFCHPQFPQHLLSHPAYAMNXXXXXXXXXXXXSQ 60
MGPHPPSSYSDKKTCQNVPPEKPSSTSFCHPQFPQHLLSHPAYAMN SQ
Sbjct: 1 MGPHPPSSYSDKKTCQNVPPEKPSSTSFCHPQFPQHLLSHPAYAMNFPFPPFPHYPPYSQ 60
Query: 61 NFQYAVXXXXXXXXXXXXDGAMPSPYVPATVMPSKAPSDQGTPHSVTGPGQQDDDDAEPE 120
NFQYAV DGAMPSPYVPATVMPSKAPSDQGTPHSVTGPGQQDDDDAEPE
Sbjct: 61 NFQYAVPPQYAPYSLPPPDGAMPSPYVPATVMPSKAPSDQGTPHSVTGPGQQDDDDAEPE 120
Query: 121 RTARRLAWTEEEDIRLISTWLINYKTDKYWDKVAAEYNSATPGARRREVKHLKNRWQRMI 180
RTARRLAWTEEEDIRLISTWLINYKTDKYWDKVAAEYNSATPGARRREVKHLKNRWQRMI
Sbjct: 121 RTARRLAWTEEEDIRLISTWLINYKTDKYWDKVAAEYNSATPGARRREVKHLKNRWQRMI 180
Query: 181 NKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHKFTFGHCWNAV 240
NKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHKFTFGHCWNAV
Sbjct: 181 NKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHKFTFGHCWNAV 240
Query: 241 WDQPKWKEYISSFSAKRVMRSESGGYVSSSEDSEDMQEGKCLVDPLDMLPKNHEDMTEVQ 300
WDQPKWKEYISSFSAKRVMRSESGGYVSSSEDSEDMQEGKCLVDPLDMLPKNHEDMTEVQ
Sbjct: 241 WDQPKWKEYISSFSAKRVMRSESGGYVSSSEDSEDMQEGKCLVDPLDMLPKNHEDMTEVQ 300
Query: 301 PSVSNQKKQLELLTADASWPIEFQLGRHQLMTGTSKLNEHQQGVAVRDEMLEKESGPQDF 360
PSVSNQKKQLELLTADASWPIEFQLGRHQLMTGTSKLNEHQQGVAVRDEMLEKESGPQDF
Sbjct: 301 PSVSNQKKQLELLTADASWPIEFQLGRHQLMTGTSKLNEHQQGVAVRDEMLEKESGPQDF 360
Query: 361 EVLDNERVAREDEPKKETQPHQGFKARKVNRKRKGKASSSSCEVQEDIKHALYLQTMLNN 420
EVLDNERVAREDEPKKETQPHQGFKARKVNRKRKGKASSSSCEVQEDIKHALYLQTMLNN
Sbjct: 361 EVLDNERVAREDEPKKETQPHQGFKARKVNRKRKGKASSSSCEVQEDIKHALYLQTMLNN 420
Query: 421 DREKMSEVQLRLSKEQLELARIKQDEANVKKETALYMKYTELLLADTSRFDEFQKAEYEK 480
DREKMSEVQLRLSKEQLELARIKQDEANVKKETALYMKYTELLLADTSRFDEFQKAEYEK
Sbjct: 421 DREKMSEVQLRLSKEQLELARIKQDEANVKKETALYMKYTELLLADTSRFDEFQKAEYEK 480
Query: 481 ALKHIGGILFSKDVN 495
ALKHIGGILFSKDVN
Sbjct: 481 ALKHIGGILFSKDVN 495
>Os09g0318600 Homeodomain-like containing protein
Length = 527
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/534 (62%), Positives = 383/534 (71%), Gaps = 46/534 (8%)
Query: 1 MGPHPPSSYSDKKTCQNVPPEKPSSTSFCHPQFPQHLLSHPAYAMNXXXXXXXXXXXXSQ 60
MGP PP SDKK+CQNV P+K SS +FCH Q+PQHL S P YAMN +Q
Sbjct: 1 MGPRPPGGSSDKKSCQNVTPDKDSSMNFCHQQYPQHLFSQPPYAMNFPFPPFPHYPPYTQ 60
Query: 61 NFQYAVXXXXXXXXXXXXDGAMPSPYVPATVMPSKAPSDQGTPHSVTGPGQQDDDDAEPE 120
N QYAV GAMPS ++PA V+PSKAPSDQGTP S+TGPG+Q D+AEPE
Sbjct: 61 NLQYAVPPQYAPYTLPPPAGAMPSTFLPAPVIPSKAPSDQGTPRSITGPGEQGTDNAEPE 120
Query: 121 RTARRLAWTEEEDIRLISTWLINYKTDKYWDKVAAEYNSATPGARRREVKHLKNRWQRMI 180
+ +RL WTE+EDIRLIS WLI YKTD+YW+KV AEYNS P RRRE++H+K W ++
Sbjct: 121 KATKRLYWTEKEDIRLISAWLIYYKTDRYWEKVVAEYNSTIPATRRRELQHVKGHWHKIF 180
Query: 181 NKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHKFTFGHCWNAV 240
KVAHF+DCWCRV AKYPSG SEGMQ MDKTWLMYN+EA VMYLEEA+H F F HCW AV
Sbjct: 181 RKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMYLEEAEHNFAFDHCWKAV 240
Query: 241 WDQPKWKEYISSFSAKRVMRSESGGYVSSSEDSEDM-----QEGKCLVDP---------- 285
W+QPKWK Y+S KR M+S+S Y+SSSEDSE+M E C+
Sbjct: 241 WNQPKWKAYMSCLFTKRTMQSDSWEYMSSSEDSEEMPGKEIGEEVCMTSKEAKVKRSTSS 300
Query: 286 ----LDMLPKNHEDMTEVQPSVSNQ--------------------KKQLELLTADASWPI 321
DML KN E++TEV+PS+SN+ KKQ ELLTAD SWP
Sbjct: 301 SEMQEDMLIKNPEELTEVEPSISNEKLLLASLKQQDACTKDTGISKKQSELLTADTSWPT 360
Query: 322 EFQLGRHQLMTGTSKLNEHQQGVAVRDEMLEKESGPQDFEVLDNERVAREDEPKKETQPH 381
F+L TS+LNEHQQG+AVRD+MLEKES PQ F+ DNER RE+ P+KETQP
Sbjct: 361 GFRL------VDTSELNEHQQGLAVRDDMLEKESRPQGFDAQDNERATRENIPRKETQP- 413
Query: 382 QGFKARKVNRKRKGKASSSSCEVQEDIKHALYLQTMLNNDREKMSEVQLRLSKEQLELAR 441
+ KA K +RKRKGKASSSSCEVQEDIKHA++LQTMLNNDR KMSEVQLRLSKEQLELAR
Sbjct: 414 RICKAPKFSRKRKGKASSSSCEVQEDIKHAMHLQTMLNNDRVKMSEVQLRLSKEQLELAR 473
Query: 442 IKQDEANVKKETALYMKYTELLLADTSRFDEFQKAEYEKALKHIGGILFSKDVN 495
IKQ+EA KKET LY KYTELLLADTSRFDEFQKAEYEKAL+HIGG+LFSKD N
Sbjct: 474 IKQEEAREKKETTLYKKYTELLLADTSRFDEFQKAEYEKALRHIGGMLFSKDGN 527
>Os06g0521000 Homeodomain-like containing protein
Length = 291
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 95/183 (51%), Gaps = 30/183 (16%)
Query: 85 PYVPATVMPSKAPSDQGTPHSVTGPGQQ-------DDDDAEPERTARRLAWTEEEDIRLI 137
P+VP P+ P++Q P S PG Q D++A RT +RL W+ EEDIRL+
Sbjct: 109 PFVP----PNYYPAEQVAPCSKLRPGAQQPVNIDSGDEEAHTVRTEKRLTWSTEEDIRLV 164
Query: 138 STWLINY---------KTDKYWDKVAAEYNSATPGARRREVKHLKNRWQRMINKVAHFND 188
S WL N K D+YW V AEYNS TP R R+ K +K+R+ ++ V F
Sbjct: 165 SAWLNNSNDSISGNFKKNDRYWGDVTAEYNSTTPKNRTRQEKQIKDRFHKIKKNVGRFCC 224
Query: 189 CWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHK-FTFGHCWNAVWDQPKWK 247
+ V + Y SGQ++ MQ +K A Y + K F+F HCWN + DQPKW
Sbjct: 225 VYKEVKSIYVSGQND-MQLREK--------AEAAYQADYKEGPFSFLHCWNILRDQPKWH 275
Query: 248 EYI 250
Y+
Sbjct: 276 SYL 278
>Os01g0527800
Length = 484
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 94/182 (51%), Gaps = 28/182 (15%)
Query: 85 PYVPATVMPSKAPSDQGTPHSVTGPGQQ-------DDDDAEPERTARRLAWTEEEDIRLI 137
P+VP P+ P++Q P S PG Q D++A RT +RL W+ EEDIRL+
Sbjct: 109 PFVP----PNYYPAEQVAPCSKLHPGAQQPVNIDSGDEEAPNVRTEKRLTWSTEEDIRLV 164
Query: 138 STWLINY---------KTDKYWDKVAAEYNSATPGARRREVKHLKNRWQRMINKVAHFND 188
S WL N K D YW V AEYNS TP R R+ K +K+R+ ++ V F
Sbjct: 165 SAWLNNSNDSISGNFKKNDCYWGDVTAEYNSTTPKNRTRQEKQIKDRFHKIKKNVGRFCC 224
Query: 189 CWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHKFTFGHCWNAVWDQPKWKE 248
+ V + Y +GQ++ MQ +K Y + Y E F+F HCWN + DQPKW
Sbjct: 225 VYKEVKSIYVNGQND-MQLREKAEAAYQAD----YKE---GPFSFLHCWNILRDQPKWHA 276
Query: 249 YI 250
Y+
Sbjct: 277 YL 278
>Os11g0282700 Homeodomain-like containing protein
Length = 514
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 96 APSDQGTPHSVTGPGQQ-------DDDDAEPERTARRLAWTEEEDIRLISTWLINY---- 144
+P++ +P + +GPG+Q ++ RT +RL WT EEDIRL+S WL N
Sbjct: 139 SPAEYRSPVTKSGPGEQHPINIDSGGEETPTVRTEKRLTWTHEEDIRLVSAWLNNLNDSI 198
Query: 145 -----KTDKYWDKVAAEYNSATPGARRREVKHLKNRWQRMINKVAHFNDCWCRVMAKYPS 199
K D YW V YNS TP R R+ K +K+R+ ++ V F + V + Y S
Sbjct: 199 NGNFKKNDCYWGDVTTAYNSTTPRNRMRQEKQIKDRFHKIKKNVGRFCCAYKEVKSIYVS 258
Query: 200 GQSEGMQQMDKTWLMYNKEAHVMYLEEAKH-KFTFGHCWNAVWDQPKWKEYI 250
GQ+E +Q M+K H Y + K +FTF HCW A+ DQPKW Y+
Sbjct: 259 GQNE-LQLMEKV--------HATYEADYKEGQFTFLHCWKALRDQPKWHAYL 301
>Os10g0449100
Length = 424
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 20/143 (13%)
Query: 115 DDAEPERTARRLAWTEEEDIRLISTWL------IN---YKTDKYWDKVAAEYNSATPGAR 165
DD + RTA+RL W +ED+RL+S WL IN K + YW V YNS TP R
Sbjct: 135 DDGDDVRTAKRLTWASDEDLRLVSAWLYHSNDPINGNGKKNESYWGDVVELYNSTTPINR 194
Query: 166 RREVKHLKNRWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLE 225
+REVKHLK+RWQR+ V F W + Y SG S+ + A+ Y++
Sbjct: 195 KREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLR---------DFANQFYVD 245
Query: 226 EAKHK--FTFGHCWNAVWDQPKW 246
+ ++ FT HCW + D+PKW
Sbjct: 246 DYPNEGPFTVLHCWKVLRDEPKW 268
>Os09g0241700 Homeodomain-like containing protein
Length = 315
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 73/139 (52%), Gaps = 17/139 (12%)
Query: 121 RTARRLAWTEEEDIRLISTWLINY---------KTDKYWDKVAAEYNSATPGARRREVKH 171
RT +RL+W ++ED+RLIS WL N K DKYW VAA YNS TP R R VK
Sbjct: 49 RTDKRLSWMKDEDLRLISAWLNNSNDPIESNFKKNDKYWGDVAAAYNSTTPKNRARLVKQ 108
Query: 172 LKNRWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHKF 231
+K+R+ ++ KV +F W V + Y SG+S + NK + + F
Sbjct: 109 VKDRFGKIRKKVGNFCCSWKEVNSLYASGESNED--------LMNKAQKIYENDFKDGPF 160
Query: 232 TFGHCWNAVWDQPKWKEYI 250
F HCWN + QPKW Y+
Sbjct: 161 LFMHCWNELKKQPKWHAYL 179
>Os06g0716600
Length = 542
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 28/192 (14%)
Query: 114 DDDAEPERTARRLAWTEEEDIRLISTWLIN---------YKTDKYWDKVAAEYNSATPGA 164
D E RT +R+ WT+EED+R++S+WL+N K ++YW V A YN TP
Sbjct: 130 DSGDETPRTEKRIFWTQEEDVRMMSSWLLNSTDSTVGADRKNEQYWTDVEATYNETTPSH 189
Query: 165 RRREVKHLKNRWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYL 224
RRR K +K+R+ ++ F+ W + Y SG + D+ W+ ++AHV Y+
Sbjct: 190 RRRNAKQIKDRFHKVNKWTDLFHSAWLKARMIYTSGYN------DQMWI---EKAHVFYI 240
Query: 225 EEAKH----KFTFGHCWNAVWDQPKWKEYISSFSAKRVMRSESG-GYVSSSEDSEDMQEG 279
++ + F WN V + KW Y + A R + G G EDS +
Sbjct: 241 KDNEKLNLGPFVLMEVWNTVKTEAKWITYNNGLKAARKRIATKGLGKEKEGEDSSPL--- 297
Query: 280 KCLVDPLDMLPK 291
VD LD P+
Sbjct: 298 --YVDELDEQPR 307
>Os02g0466700
Length = 686
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 87/172 (50%), Gaps = 21/172 (12%)
Query: 111 QQDDDDAEPERTARRLAWTEEEDIRLISTWLINY---------KTDKYWDKVAAEYNSAT 161
+ D+ E R R+ WTEEE+IRL+S+WL N K + YW VA E+NS T
Sbjct: 400 ESSDNSQEAGRRGTRVNWTEEENIRLLSSWLNNSVDPINGNDKKAEYYWKAVAVEFNSNT 459
Query: 162 PGA-RRREVKHLKNRWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAH 220
+ R+R V K W + ++ F + R + + SG S+ M +M ++AH
Sbjct: 460 SRSNRKRTVVQCKTHWGGVKKEIGKFCGAYSRARSTFSSGYSDDM-------IM--EKAH 510
Query: 221 VMYLEEAKHK-FTFGHCWNAVWDQPKWKEYISSFSA-KRVMRSESGGYVSSS 270
+M+ E K FT + W + DQPKW+ + S KR SESG Y SSS
Sbjct: 511 IMFKSENNEKPFTLEYMWRELKDQPKWRRVLEEDSKNKRTKISESGAYTSSS 562
>Os01g0385600 Homeodomain-like containing protein
Length = 211
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 76/149 (51%), Gaps = 19/149 (12%)
Query: 112 QDDDDAEPERTARRLAWTEEEDIRLISTWLINY---------KTDKYWDKVAAEYNSATP 162
++ ++ RT +RL W+ EED+RL+S WL N K DKYW VAA YNS TP
Sbjct: 60 ENGNNGNSTRTEKRLGWSTEEDLRLVSAWLNNSNDPIESNFKKNDKYWADVAAAYNSTTP 119
Query: 163 GARRREVKHLKNRWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVM 222
+R R+VK +K+R+ ++ KV +F W + Y SG+ + M K A +
Sbjct: 120 SSRFRQVKQVKDRFSKIKKKVGNFCCSWKEANSLYASGECN-VDLMAK--------AQKI 170
Query: 223 YLEEAKHK-FTFGHCWNAVWDQPKWKEYI 250
Y + K F CWN + QPK Y+
Sbjct: 171 YENDFKDGPFLLTQCWNELKTQPKCHAYL 199
>Os04g0286500 Homeodomain-like containing protein
Length = 417
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 84/169 (49%), Gaps = 21/169 (12%)
Query: 114 DDDAEPERTARRLAWTEEEDIRLISTWLINY---------KTDKYWDKVAAEYN-SATPG 163
D+ E R + WTEEE++RL+S+WL N K + YW VAAE+N +A+
Sbjct: 140 DNSQETGRRGTHVNWTEEENLRLLSSWLNNSLDSINGNDKKGEYYWRDVAAEFNGNASSN 199
Query: 164 ARRREVKHLKNRWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMY 223
R+R V K W + +A F + R + SG S+ M +M ++AH +Y
Sbjct: 200 NRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDM-------IM--EKAHALY 250
Query: 224 LEEAKHK-FTFGHCWNAVWDQPKWKEYISSFSA-KRVMRSESGGYVSSS 270
E K FT + W + DQPKW+ + S KR SESG Y SSS
Sbjct: 251 KSENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISESGAYTSSS 299
>Os01g0821200
Length = 356
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 20/143 (13%)
Query: 115 DDAEPERTARRLAWTEEEDIRLISTWL------IN---YKTDKYWDKVAAEYNSATPGAR 165
DD + RTA+RL W +ED+RL+S WL IN K + Y V YN+ TP R
Sbjct: 82 DDGDNVRTAKRLTWASDEDLRLVSAWLYHSNDPINGNGKKNESYRGDVVELYNNTTPINR 141
Query: 166 RREVKHLKNRWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLE 225
+REVKHLK++WQR+ V F W + Y SG S+ + A+ Y+
Sbjct: 142 KREVKHLKDQWQRIKRWVGFFCASWKKAALVYTSGYSDDQLR---------DFANQFYVN 192
Query: 226 EAKHK--FTFGHCWNAVWDQPKW 246
+ ++ FT H W + D+PKW
Sbjct: 193 DYPNEGPFTVLHYWKVLHDEPKW 215
>Os01g0261900
Length = 193
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 9/97 (9%)
Query: 115 DDAEPERTARRLAWTEEEDIRLISTWLINY---------KTDKYWDKVAAEYNSATPGAR 165
++ + RT +RL WT +ED+RLIS WL N K DKYW VAA YNS TP +R
Sbjct: 62 ENGDISRTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKSR 121
Query: 166 RREVKHLKNRWQRMINKVAHFNDCWCRVMAKYPSGQS 202
R+VK +K+R+ ++ KV +F W + Y SG+S
Sbjct: 122 VRQVKQVKDRFGKIKKKVGNFCCSWKEANSLYASGES 158
>Os06g0534700
Length = 409
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 19/167 (11%)
Query: 115 DDAEPERTARRLAWTEEEDIRLISTWLINY---------KTDKYWDKVAAEYNSATP-GA 164
D +E R R+ WTE+++IRL+S+WL N K+++YW VA E+NS P
Sbjct: 150 DSSEEGRRGTRINWTEDDNIRLMSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSNG 209
Query: 165 RRREVKHLKNRWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYL 224
+R K + W + V F + + + SG S+ M M+K Y K +
Sbjct: 210 NKRNPKQCRTHWDNVKRDVTKFCGFYSKARTTFTSGYSDDM-IMEKAREWYKKHNN---- 264
Query: 225 EEAKHKFTFGHCWNAVWDQPKWKEYISSFS-AKRVMRSESGGYVSSS 270
+ FT + W + DQPKW+ + S KR SESG Y SSS
Sbjct: 265 ---QKPFTLEYMWKDLKDQPKWRRVLEESSHNKRSKISESGAYTSSS 308
>Os11g0514200
Length = 409
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 19/167 (11%)
Query: 115 DDAEPERTARRLAWTEEEDIRLISTWLINY---------KTDKYWDKVAAEYNSATP-GA 164
D +E R R+ WTE+++IRL+S+WL N K+++YW VA E+NS P
Sbjct: 150 DSSEEGRRGTRINWTEDDNIRLMSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSNG 209
Query: 165 RRREVKHLKNRWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYL 224
+R K + W + V F + + + SG S+ M M+K Y K +
Sbjct: 210 NKRNPKQCRTHWDNVKRDVTKFCGFYSKARTTFTSGYSDDM-IMEKAREWYKKHNN---- 264
Query: 225 EEAKHKFTFGHCWNAVWDQPKWKEYISSFS-AKRVMRSESGGYVSSS 270
+ FT + W + DQPKW+ + S KR SESG Y SSS
Sbjct: 265 ---QKPFTLEYMWKDLKDQPKWRRVLEESSHNKRNKISESGAYTSSS 308
>Os10g0410300 Homeodomain-like containing protein
Length = 293
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 20/150 (13%)
Query: 125 RLAWTEEEDIRLISTWL---------INYKTDKYWDKVAAEYNSATP-GARRREVKHLKN 174
R+ WTEEE++ L+S W+ I+ K++ YW VA +N++ P +R VK LK
Sbjct: 57 RINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKT 116
Query: 175 RWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHK-FTF 233
W + + F + R+ A + SGQS+ M AH ++ +E K K FT
Sbjct: 117 HWGDVKRDITKFCGVYGRLKATWKSGQSDDMVM---------NSAHAIFEKENKDKPFTL 167
Query: 234 GHCWNAVWDQPKWKEYISSFSAKRVMRSES 263
+ W V D PKW + S + + E+
Sbjct: 168 EYMWREVKDLPKWCRIVQEDSGNKRTKEET 197
>Os08g0178900 Homeodomain-like containing protein
Length = 389
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 26/144 (18%)
Query: 121 RTARRLAWTEEEDIRLISTWLINYKTD----------KYWDKVAAEYNSATPGARRREVK 170
RT +R+ WTEEEDIRL+S W I + TD +YW +V YN TP R+R +K
Sbjct: 93 RTEKRILWTEEEDIRLMSAW-IEHSTDSTCGADKGGGQYWGEVVESYNKTTPPLRKRNLK 151
Query: 171 HLKNRWQRMINKVAHFNDC-WCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKH 229
K+RW + IN+ +C + + + SG S M W+ AH Y+++ K
Sbjct: 152 QCKDRWHK-INRWTDLFECAYVKARRIFTSGYSNQM------WI---DAAHKFYVDDNKE 201
Query: 230 K----FTFGHCWNAVWDQPKWKEY 249
F W + KWK Y
Sbjct: 202 AKLGPFVLMEVWKICREVSKWKTY 225
>Os01g0549300 Homeodomain-like containing protein
Length = 389
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 26/156 (16%)
Query: 121 RTARRLAWTEEEDIRLISTWLINYKTD----------KYWDKVAAEYNSATPGARRREVK 170
RT +R+ WTEEEDI L+S W I + TD +YW +V YN TP R+R +K
Sbjct: 93 RTEKRILWTEEEDIILMSAW-IEHSTDSTCGADKGGGQYWGEVVESYNKTTPPLRKRNLK 151
Query: 171 HLKNRWQRMINKVAHFNDC-WCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKH 229
K+RW + IN+ +C + + + SG S M W+ AH Y+++ K
Sbjct: 152 QCKDRWHK-INRWTDLFECAYVKARRIFTSGYSNQM------WI---DAAHKFYVDDNKE 201
Query: 230 K----FTFGHCWNAVWDQPKWKEYISSFSAKRVMRS 261
F W + KWK Y + R +S
Sbjct: 202 AKLGPFVLMEVWKICREVSKWKTYNDNLRNARKRKS 237
>Os01g0373400 Homeodomain-like containing protein
Length = 376
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 67/146 (45%), Gaps = 28/146 (19%)
Query: 121 RTARRLAWTEEEDIRLISTWLINYKTD----------KYWDKVAAEYNSATPGARRREVK 170
RT +R+ WT +ED+R++S WL + TD +YW +V YN TP RRR K
Sbjct: 164 RTEKRIMWTPDEDVRVMSAWL-EHSTDFTCGADKGGVQYWGEVVETYNKTTPPLRRRNAK 222
Query: 171 HLKNRWQRMINKVAHFNDC-WCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKH 229
K+RW + INK +C + + + SG S M WL AH Y+++ K
Sbjct: 223 QCKDRWNK-INKWTDLFECAYAKARRVFTSGYSAEM------WL---DAAHKFYVDDNKE 272
Query: 230 ------KFTFGHCWNAVWDQPKWKEY 249
+ W D PKWK Y
Sbjct: 273 CKDVVGPYMLTEVWKICRDVPKWKTY 298
>Os10g0563100
Length = 390
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 35/138 (25%)
Query: 115 DDAEPERTARRLAWTEEEDIRLISTWLINYKTDKYWDKVAAEYNSATPGARRREVKHLKN 174
DD + RTA+RL W +ED+R TP R+REVKHLK+
Sbjct: 128 DDGDDVRTAKRLTWASDEDLR------------------------TTPINRKREVKHLKD 163
Query: 175 RWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHK--FT 232
RWQR+ V F W + Y SG S+ A+ Y+++ ++ FT
Sbjct: 164 RWQRIKRWVGFFCASWKKAALVYTSGYSDD---------QLRDFANQFYVDDYPNEGPFT 214
Query: 233 FGHCWNAVWDQPKWKEYI 250
HCW + D+PKW +
Sbjct: 215 VLHCWKVLRDEPKWHAVL 232
>Os11g0506300
Length = 438
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 9/74 (12%)
Query: 114 DDDAEPERTARRLAWTEEEDIRLISTWLIN---------YKTDKYWDKVAAEYNSATPGA 164
D E RT +R+ WT+EED+R++S+WL+N K ++YW V A YN TP
Sbjct: 130 DSGDETPRTEKRIFWTQEEDVRMMSSWLLNSTDSTVGADRKNEQYWTDVEATYNETTPSH 189
Query: 165 RRREVKHLKNRWQR 178
RRR K +K+R+ +
Sbjct: 190 RRRNAKQIKDRFHK 203
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.128 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,218,600
Number of extensions: 734800
Number of successful extensions: 2462
Number of sequences better than 1.0e-10: 22
Number of HSP's gapped: 2424
Number of HSP's successfully gapped: 22
Length of query: 495
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 390
Effective length of database: 11,553,331
Effective search space: 4505799090
Effective search space used: 4505799090
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 158 (65.5 bits)