Os11g0282700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Homeodomain-like containing protein.
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Os11g0282700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Homeodomain-like containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 314.43 | 0.833 | 6.51 | 1.4 | 0.103 | 1.83 | 1.52 | 0.185 | -2.17 | 2.38 | 18.3 | 2245 | -- | -- |
| 314.44 | 0.826 | 6.52 | 1.36 | 0.106 | 1.82 | 1.52 | -- | -2.18 | 2.36 | 18.5 | 2242 | -- | -- |
| 322.31 | 0.836 | 6.51 | 1.47 | 0.0988 | 1.79 | -- | 0.616 | -2.15 | 22.4 | 18.31 | 2427 | -- | -- |
| 322.53 | 0.836 | 6.53 | 1.3 | 0.0964 | 1.76 | -- | -- | -2.18 | 22 | 18.7 | 2460 | -- | -- |
| 322.73 | 0.837 | 6.51 | 1.45 | -- | 1.81 | -- | 0.541 | -2.15 | -- | 18.5 | 2394 | -- | -- |
| 393.98 | 0.931 | 6.43 | 2.06 | 0.312 | -- | 1.43 | -- | -1.78 | 0.857 | -- | -- | -- | -- |
| 402.11 | 0.939 | 6.44 | 2.01 | 0.322 | -- | -- | -- | -1.79 | 23.6 | -- | -- | -- | -- |
| 322.97 | 0.837 | 6.53 | 1.3 | -- | 1.81 | -- | -- | -2.19 | -- | 18.7 | 2407 | -- | -- |
| 359.83 | 0.883 | 6.58 | -- | 0.0351 | 2.29 | -- | -- | -2.4 | 23.4 | 17.6 | 2483 | -- | -- |
| 408.63 | 0.945 | 6.43 | 2.02 | -- | -- | -- | -- | -1.78 | -- | -- | -- | -- | -- |
| 508.69 | 1.06 | 6.49 | -- | 0.347 | -- | -- | -- | -2.01 | 24 | -- | -- | -- | -- |
| 359.87 | 0.884 | 6.58 | -- | -- | 2.3 | -- | -- | -2.42 | -- | 17.8 | 2481 | -- | -- |
| 516.26 | 1.06 | 6.48 | -- | -- | -- | -- | -- | -2.01 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 311.28 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 3 | 312.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 23 | 315.25 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 86 | 317.72 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 18 |
| 141 | 318.35 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 181 | 318.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 241 | 319.35 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 297 | 319.84 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 309 | 319.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 311 | 319.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 323 | 319.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 665 | 321.41 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 15 |
| 847 | 321.95 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 877 | 322.04 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 951 | 322.23 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 7 |