Os10g0563100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os10g0563100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 396.62 | 0.936 | 3.17 | 0.668 | 0.0694 | 8.81 | 1.49 | 12.3 | -0.098 | 21.5 | 77.8 | 49 | 2.03 | 5.37 |
| 415.27 | 0.949 | 3.14 | 0.77 | 0.0765 | 8.04 | 0.554 | -- | -0.0128 | 19.5 | 77.07 | 36 | 2.07 | 5.37 |
| 397.96 | 0.929 | 3.17 | 0.651 | 0.0483 | 10.4 | -- | 13.8 | -0.132 | 14.1 | 76.98 | 43 | 2.13 | 5.18 |
| 408.79 | 0.942 | 3.1 | 0.664 | 0.035 | 6.46 | -- | -- | 0.0464 | 18.2 | 77.08 | 36 | 2.03 | 5.38 |
| 397.38 | 0.928 | 3.17 | 0.663 | -- | 10.2 | -- | 14.9 | -0.121 | -- | 76.96 | 43 | 2.13 | 5.18 |
| 452.61 | 0.997 | 3.17 | 0.651 | 0.00686 | -- | -1.41 | -- | -0.138 | 10.2 | -- | -- | -- | -- |
| 460.26 | 1 | 3.17 | 0.593 | 0.0656 | -- | -- | -- | -0.143 | 5.25 | -- | -- | -- | -- |
| 402.19 | 0.934 | 3.11 | 0.656 | -- | 5.14 | -- | -- | -0.0119 | -- | 76.96 | 35 | 2.04 | 5.4 |
| 415.44 | 0.949 | 3.1 | -- | 0.0784 | 5.63 | -- | -- | 0.0512 | 17.8 | 77.05 | 35 | 2.03 | 5.38 |
| 460.48 | 1 | 3.17 | 0.595 | -- | -- | -- | -- | -0.142 | -- | -- | -- | -- | -- |
| 469.53 | 1.01 | 3.18 | -- | 0.076 | -- | -- | -- | -0.209 | 4.96 | -- | -- | -- | -- |
| 413.25 | 0.947 | 3.11 | -- | -- | 5.18 | -- | -- | -0.00876 | -- | 77.01 | 35 | 2.03 | 5.4 |
| 469.83 | 1.01 | 3.18 | -- | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 408.70 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 2 | 6 |
| 6 | 417.60 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 11 | 420.58 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 25 | 420.58 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 44 | 422.75 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 6 |
| 46 | 423.15 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 2 |
| 47 | 423.56 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 2 |
| 49 | 423.57 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 2 | 2 |
| 55 | 424.15 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 78 | 428.09 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 3 |
| 89 | 428.28 | humidity | 90.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 94 | 428.28 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 101 | 428.34 | radiation | 1.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 118 | 428.54 | wind | 3.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 137 | 429.52 | wind | 5.0 | 30 | > th | dose dependent | rect. | 24 | 8 |
| 145 | 429.97 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 11 | 5 |
| 161 | 430.83 | wind | 5.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 162 | 430.87 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 164 | 430.88 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 171 | 430.99 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 8 |
| 179 | 431.28 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 204 | 431.61 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 14 | 2 |
| 206 | 431.69 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 224 | 432.38 | wind | 3.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 253 | 432.93 | humidity | 90.0 | 720 | < th | dose independent | rect. | 2 | 1 |
| 265 | 433.21 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 2 | 1 |
| 304 | 434.25 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 11 |
| 306 | 434.26 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 2 |
| 313 | 434.37 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 11 |
| 322 | 434.73 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 326 | 434.73 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 353 | 435.08 | humidity | 90.0 | 720 | > th | dose independent | rect. | 2 | 1 |
| 378 | 435.31 | humidity | 90.0 | 720 | > th | dose independent | rect. | 2 | 3 |
| 400 | 435.53 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 16 |
| 405 | 435.62 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 411 | 435.71 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 13 | 13 |
| 438 | 436.03 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 7 | 19 |
| 453 | 436.17 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 2 | 1 |
| 457 | 436.24 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 486 | 436.64 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 21 | 5 |
| 495 | 436.81 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 19 | 7 |
| 510 | 437.01 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 23 | 3 |
| 513 | 437.01 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 23 | 3 |
| 517 | 437.04 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 523 | 437.10 | wind | 9.0 | 90 | > th | dose dependent | rect. | 21 | 13 |
| 524 | 437.10 | wind | 9.0 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 541 | 437.26 | wind | 5.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 550 | 437.36 | humidity | 70.0 | 720 | < th | dose independent | rect. | 12 | 1 |
| 562 | 437.39 | humidity | 90.0 | 90 | > th | dose independent | rect. | 10 | 16 |
| 583 | 437.62 | humidity | 90.0 | 90 | > th | dose independent | rect. | 13 | 13 |
| 613 | 437.78 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 7 | 20 |
| 622 | 437.85 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 18 |
| 645 | 437.94 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 18 | 14 |
| 708 | 438.38 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 733 | 438.44 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 862 | 438.51 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 3 |
| 863 | 438.51 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 3 |
| 881 | 438.67 | humidity | 90.0 | 90 | > th | dose independent | rect. | 24 | 1 |
| 910 | 438.85 | humidity | 90.0 | 90 | < th | dose independent | rect. | 11 | 15 |
| 918 | 438.89 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 949 | 439.03 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 13 |
| 967 | 439.19 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 13 |
| 980 | 439.30 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 1 | 3 |
| 989 | 439.32 | radiation | 30.0 | 270 | < th | dose independent | rect. | 12 | 14 |