BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0563100 Os10g0563100|Os10g0563100
(390 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0563100 631 0.0
Os10g0449100 489 e-138
Os01g0821200 422 e-118
Os01g0527800 169 2e-42
Os06g0521000 Homeodomain-like containing protein 149 4e-36
Os11g0282700 Homeodomain-like containing protein 144 9e-35
Os09g0241700 Homeodomain-like containing protein 142 4e-34
Os02g0785600 117 2e-26
Os06g0716600 106 4e-23
Os01g0373400 Homeodomain-like containing protein 100 3e-21
Os08g0178900 Homeodomain-like containing protein 97 1e-20
Os01g0385600 Homeodomain-like containing protein 93 4e-19
Os01g0549300 Homeodomain-like containing protein 91 1e-18
Os01g0873000 Conserved hypothetical protein 87 2e-17
Os02g0466700 75 6e-14
Os09g0424900 74 2e-13
Os06g0534700 74 2e-13
Os11g0514200 74 2e-13
Os07g0575300 73 3e-13
Os08g0255200 73 4e-13
Os04g0286500 Homeodomain-like containing protein 68 1e-11
Os09g0317700 Homeodomain-like containing protein 68 1e-11
>Os10g0563100
Length = 390
Score = 631 bits (1628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/390 (79%), Positives = 311/390 (79%)
Query: 1 MSCRSKRQVAXXXXXXXXXXXXXXXXGSTTASGCXXXXXXXXXXXXXXXXPPLGGQPGLW 60
MSCRSKRQVA GSTTASGC PPLGGQPGLW
Sbjct: 1 MSCRSKRQVAPRPPPPSSSPPPPPPSGSTTASGCFDAASSAFFQASTAMAPPLGGQPGLW 60
Query: 61 NGSLPHTNSFDPASSDCGMDIHPPGGFLSMLQSGQQPLVPPHVLFXXXXXXXXXXXXXXN 120
NGSLPHTNSFDPASSDCGMDIHPPGGFLSMLQSGQQPLVPPHVLF N
Sbjct: 61 NGSLPHTNSFDPASSDCGMDIHPPGGFLSMLQSGQQPLVPPHVLFPATWPPMPPMAPTTN 120
Query: 121 SGTIINLDDGDDVRTAKRLTWASDEDLRTTPINRKREVKHLKDRWQRIKRWVGFFCASWK 180
SGTIINLDDGDDVRTAKRLTWASDEDLRTTPINRKREVKHLKDRWQRIKRWVGFFCASWK
Sbjct: 121 SGTIINLDDGDDVRTAKRLTWASDEDLRTTPINRKREVKHLKDRWQRIKRWVGFFCASWK 180
Query: 181 KAALVYTSGYSDDQLRDFANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEELEKPHK 240
KAALVYTSGYSDDQLRDFANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEELEKPHK
Sbjct: 181 KAALVYTSGYSDDQLRDFANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEELEKPHK 240
Query: 241 RSLDDGSDTLSQKDIGEKERPMGRNEAKKQRNXXXXXXXXXXXXSLHEDMKKYMDVQAAA 300
RSLDDGSDTLSQKDIGEKERPMGRNEAKKQRN SLHEDMKKYMDVQAAA
Sbjct: 241 RSLDDGSDTLSQKDIGEKERPMGRNEAKKQRNGKGKGKGKDDDDSLHEDMKKYMDVQAAA 300
Query: 301 SKRHEEFLGTQHRISDAKVEMCTIYELAVVSTFEGGLTKISAVQNDSVVRMCHRPATPXX 360
SKRHEEFLGTQHRISDAKVEMCTIYELAVVSTFEGGLTKISAVQNDSVVRMCHRPATP
Sbjct: 301 SKRHEEFLGTQHRISDAKVEMCTIYELAVVSTFEGGLTKISAVQNDSVVRMCHRPATPSS 360
Query: 361 XXXXXXXXXXXXXXXXXXXCEERQLWCVPR 390
CEERQLWCVPR
Sbjct: 361 HAGTAVSASSVVLVAVTVHCEERQLWCVPR 390
>Os10g0449100
Length = 424
Score = 489 bits (1259), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/375 (68%), Positives = 262/375 (69%), Gaps = 48/375 (12%)
Query: 1 MSCRSKRQVAXXXXXXXXXXXXXXXXGSTTASGCXXXXXXXXXXXXXXXXPPLGGQPGLW 60
MS RSKRQVA GS TASGC PPLGGQPG W
Sbjct: 1 MSRRSKRQVASRPPRPPSSPPS----GSATASGCFDAASSAFFQASFAMAPPLGGQPGWW 56
Query: 61 NGSLPHTNSFDPASSDCGMDIHPPGGFLSMLQSGQQPLVPPHVLFXXXXXXXXXXXXXXN 120
NGSLPHTNSF P SSDCGMDIHPPGGFLSMLQ+GQQPLVPPHVLF N
Sbjct: 57 NGSLPHTNSFGPVSSDCGMDIHPPGGFLSMLQTGQQPLVPPHVLFLATWPPMPPMAPTTN 116
Query: 121 SGT-----------IINLDDGDDVRTAKRLTWASDEDLR--------------------- 148
SGT +INLDDGDDVRTAKRLTWASDEDLR
Sbjct: 117 SGTTHARSRSKAKPVINLDDGDDVRTAKRLTWASDEDLRLVSAWLYHSNDPINGNGKKNE 176
Query: 149 ------------TTPINRKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLR 196
TTPINRKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLR
Sbjct: 177 SYWGDVVELYNSTTPINRKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLR 236
Query: 197 DFANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEELEKPHKRSLDDGSDTLSQKDIG 256
DFANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEELEKPHKRSLDDGSDTLSQKDIG
Sbjct: 237 DFANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEELEKPHKRSLDDGSDTLSQKDIG 296
Query: 257 EKERPMGRNEAKKQRNXXXXXXXXXXXXSLHEDMKKYMDVQAAASKRHEEFLGTQHRISD 316
EKERP+GRNEAKKQRN SL EDMKKYMDVQAAASKRHEEFLGTQHRISD
Sbjct: 297 EKERPIGRNEAKKQRNGKGKGKGKDDDDSLREDMKKYMDVQAAASKRHEEFLGTQHRISD 356
Query: 317 AKVEMCTIYELAVVS 331
AKVE+ + AV++
Sbjct: 357 AKVEVARLRREAVLT 371
>Os01g0821200
Length = 356
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/332 (66%), Positives = 234/332 (70%), Gaps = 46/332 (13%)
Query: 68 NSFDPASSD--CGMDIHPPGGFLSMLQSGQQPLVPPHVLFXXXXXXXXXXXXXXNSGT-- 123
N F ASS+ GMDIHPPGGFLSMLQ+GQQPLVPPHVLF NSGT
Sbjct: 9 NLFSKASSNGAIGMDIHPPGGFLSMLQTGQQPLVPPHVLFPATWPPMPPMAPATNSGTTH 68
Query: 124 ---------IINLDDGDDVRTAKRLTWASDEDLR-------------------------- 148
+INLDDGD+VRTAKRLTWASDEDLR
Sbjct: 69 ARSRSKAKPVINLDDGDNVRTAKRLTWASDEDLRLVSAWLYHSNDPINGNGKKNESYRGD 128
Query: 149 -------TTPINRKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQ 201
TTPINRKREVKHLKD+WQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQ
Sbjct: 129 VVELYNNTTPINRKREVKHLKDQWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQ 188
Query: 202 FYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEELEKPHKRSLDDGSDTLSQKDIGEKERP 261
FYV+DYPNEGPFTVLH WKVL DEPKWHAVLEELEKPHKRSLDDGSDTLSQKDIGEKERP
Sbjct: 189 FYVNDYPNEGPFTVLHYWKVLHDEPKWHAVLEELEKPHKRSLDDGSDTLSQKDIGEKERP 248
Query: 262 MGRNEAKKQRNXXXXXXXXXXXXSLHEDMKKYMDVQAAASKRHEEFLGTQHRISDAKVEM 321
MGRNEAKKQRN SLHEDMKKYMDVQAAASKRHEEFLGTQHRISDAKVE+
Sbjct: 249 MGRNEAKKQRNGKGKGKGKDDDDSLHEDMKKYMDVQAAASKRHEEFLGTQHRISDAKVEV 308
Query: 322 CTIYELAVVSTFEGGLTKISAVQNDSVVRMCH 353
+ AV++ L + Q + ++ H
Sbjct: 309 ARLRREAVLTESYQKLMSMDTSQMTNEMKAEH 340
>Os01g0527800
Length = 484
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 151/309 (48%), Gaps = 57/309 (18%)
Query: 78 GMDIHPPGGFLSMLQ-----SGQQPLVPPHVLFXXXXXXXXXXXXXXNSGTIINLDDGDD 132
GMD HPPGGFLS Q +P VPP+ + + +N+D GD+
Sbjct: 85 GMDFHPPGGFLSYFQDPSILQNHRPFVPPN--YYPAEQVAPCSKLHPGAQQPVNIDSGDE 142
Query: 133 ----VRTAKRLTWASDEDLR---------------------------------TTPINRK 155
VRT KRLTW+++ED+R TTP NR
Sbjct: 143 EAPNVRTEKRLTWSTEEDIRLVSAWLNNSNDSISGNFKKNDCYWGDVTAEYNSTTPKNRT 202
Query: 156 REVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVDDYPNEGPFTV 215
R+ K +KDR+ +IK+ VG FC +K+ +Y +G +D QLR+ A Y DY EGPF+
Sbjct: 203 RQEKQIKDRFHKIKKNVGRFCCVYKEVKSIYVNGQNDMQLREKAEAAYQADY-KEGPFSF 261
Query: 216 LHCWKVLRDEPKWHAVLEELEKPHKRSLDDGSDTLSQ-------KDIGEKERPMGRNEAK 268
LHCW +LRD+PKWHA LEELEKP+K +DD + + Q +DI +RP+G AK
Sbjct: 262 LHCWNILRDQPKWHAYLEELEKPNKPKMDDEVEVMEQMSTPNSPEDI---KRPVGTKTAK 318
Query: 269 KQRNXXXXXXXXXXX--XSLHEDMKKYMDVQAAASKRHEEFLGTQHRISDAKVEMCTIYE 326
QRN +++ K +VQ A+K +E L TQ ++ +E +
Sbjct: 319 AQRNGKGKRKRKAKVYLSDTDDEIDKLKEVQEMANKGRDELLETQRHVASDNLESKKLAH 378
Query: 327 LAVVSTFEG 335
LA + E
Sbjct: 379 LAAMEHKEA 387
>Os06g0521000 Homeodomain-like containing protein
Length = 291
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 111/210 (52%), Gaps = 45/210 (21%)
Query: 78 GMDIHPPGGFLSMLQ-----SGQQPLVPPHVLFXXXXXXXXXXXXXXNSGTIINLDDGDD 132
GMD HPPGGFLS Q +P VPP+ + + +N+D GD+
Sbjct: 85 GMDFHPPGGFLSYFQDPSILQNHRPFVPPN--YYPAEQVAPCSKLRPGAQQPVNIDSGDE 142
Query: 133 ----VRTAKRLTWASDEDLR---------------------------------TTPINRK 155
VRT KRLTW+++ED+R TTP NR
Sbjct: 143 EAHTVRTEKRLTWSTEEDIRLVSAWLNNSNDSISGNFKKNDRYWGDVTAEYNSTTPKNRT 202
Query: 156 REVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVDDYPNEGPFTV 215
R+ K +KDR+ +IK+ VG FC +K+ +Y SG +D QLR+ A Y DY EGPF+
Sbjct: 203 RQEKQIKDRFHKIKKNVGRFCCVYKEVKSIYVSGQNDMQLREKAEAAYQADY-KEGPFSF 261
Query: 216 LHCWKVLRDEPKWHAVLEELEKPHKRSLDD 245
LHCW +LRD+PKWH+ LEELEKP+K +DD
Sbjct: 262 LHCWNILRDQPKWHSYLEELEKPNKPKMDD 291
>Os11g0282700 Homeodomain-like containing protein
Length = 514
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 150/342 (43%), Gaps = 76/342 (22%)
Query: 61 NGSLPHT---------NSFDPASSDC---GMDIHPPGGFLSMLQ-----SGQQPLVPPHV 103
N S PH +S D + SD GMD PPGGFLS Q QP +P +
Sbjct: 68 NTSAPHLAQMKQGSDRSSMDDSLSDLQESGMDSRPPGGFLSYFQDPSSLQNHQPSIPLNY 127
Query: 104 LFXXXXXXXXXXXXXXNSGTI---------INLDDGDD----VRTAKRLTWASDEDLR-- 148
S IN+D G + VRT KRLTW +ED+R
Sbjct: 128 YATQQAAPWAPSPAEYRSPVTKSGPGEQHPINIDSGGEETPTVRTEKRLTWTHEEDIRLV 187
Query: 149 -------------------------------TTPINRKREVKHLKDRWQRIKRWVGFFCA 177
TTP NR R+ K +KDR+ +IK+ VG FC
Sbjct: 188 SAWLNNLNDSINGNFKKNDCYWGDVTTAYNSTTPRNRMRQEKQIKDRFHKIKKNVGRFCC 247
Query: 178 SWKKAALVYTSGYSDDQLRDFANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEELEK 237
++K+ +Y SG ++ QL + + Y DY EG FT LHCWK LRD+PKWHA LEELEK
Sbjct: 248 AYKEVKSIYVSGQNELQLMEKVHATYEADY-KEGQFTFLHCWKALRDQPKWHAYLEELEK 306
Query: 238 PHKRSLDD-------GSDTLSQKDIGEKERPMGRNEAKKQRN--XXXXXXXXXXXXSLHE 288
P+K D+ S S +DI RP G AK +RN + +
Sbjct: 307 PNKTKSDNEVEVRELTSTPNSPEDII---RPEGTKAAKARRNGKDKRKRKAKVYLSDMDD 363
Query: 289 DMKKYMDVQAAASKRHEEFLGTQHRISDAKVEMCTIYELAVV 330
++ K +VQ A K +E L TQ R+S +E + LA +
Sbjct: 364 EIDKPKEVQNMADKGRDELLETQRRVSSENLESKRLAHLAAM 405
>Os09g0241700 Homeodomain-like containing protein
Length = 315
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 141/296 (47%), Gaps = 51/296 (17%)
Query: 78 GMDIHPPGGFLSMLQSGQQPLVPPHVLFXXXXXXXXXXXXXXNSGTIINLDDGDDVRTAK 137
G++ PPGGF++ + + + HV + IN+ +G RT K
Sbjct: 8 GVESRPPGGFVNFINTPSNHV--HHV-------------AEGSPSQPINVVNGHVARTDK 52
Query: 138 RLTWASDEDLR---------------------------------TTPINRKREVKHLKDR 164
RL+W DEDLR TTP NR R VK +KDR
Sbjct: 53 RLSWMKDEDLRLISAWLNNSNDPIESNFKKNDKYWGDVAAAYNSTTPKNRARLVKQVKDR 112
Query: 165 WQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVDDYPNEGPFTVLHCWKVLRD 224
+ +I++ VG FC SWK+ +Y SG S++ L + A + Y +D+ +GPF +HCW L+
Sbjct: 113 FGKIRKKVGNFCCSWKEVNSLYASGESNEDLMNKAQKIYENDFK-DGPFLFMHCWNELKK 171
Query: 225 EPKWHAVLEELEKPHKRSLDDGSDTLSQKDIGEKERPMGRNEAKKQRNXXXXXXXXXXXX 284
+PKWHA LE+L+K +KR D +D + D + RP+G +K QR+
Sbjct: 172 QPKWHAYLEQLDKSNKRKA-DYNDVIPLDDEEDIPRPIGAKASKAQRSCKEKSKVQVCTT 230
Query: 285 SLHEDMKKYMDVQAAASKRHEEFLGTQHRIS-DAKVEMCTIYELAVVSTFEGGLTK 339
L +D++K+MD AA + E L TQ R+S D + A++ T+ + K
Sbjct: 231 ELEDDIRKFMDAHAATKEGQNEVLETQIRVSIDNHAAKKLSRQTAMIETYRDLMNK 286
>Os02g0785600
Length = 315
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 110/224 (49%), Gaps = 49/224 (21%)
Query: 125 INLDDGDD----VRTAKRLTWASDEDLRTTPINRKREVKHLKDRWQRIKRWVGFFCASWK 180
+N+D GD+ VRT KRLTW+++ED+R VK
Sbjct: 90 VNIDSGDEEAPTVRTEKRLTWSTEEDIRL--------VKS-------------------- 121
Query: 181 KAALVYTSGYSDDQLRDFANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEELEKPHK 240
+Y SG +D QLR+ A Y DY EGPF+ LHCW +LRD+PKWHA LEELEKP+K
Sbjct: 122 ----IYVSGQNDMQLREKAEATYQADY-KEGPFSFLHCWNILRDQPKWHAYLEELEKPNK 176
Query: 241 RSLDDGSDTLSQ-------KDIGEKERPMGRNEAKKQRNXXXXXXXXXXX--XSLHEDMK 291
+DD + + Q +DI +RP+G AK QRN +++
Sbjct: 177 PKMDDEVEVMEQMSTPNSPEDI---KRPIGTKTAKAQRNGKGKRKRKAKVYLSDTDDEID 233
Query: 292 KYMDVQAAASKRHEEFLGTQHRISDAKVEMCTIYELAVVSTFEG 335
K +VQ A+K +E L TQ R++ +E + LA + E
Sbjct: 234 KLKEVQEMANKGRDELLETQRRVASDNLESKKLAHLAAMEHKEA 277
>Os06g0716600
Length = 542
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 49/274 (17%)
Query: 123 TIINLDDGDDV-RTAKRLTWASDEDLR--------------------------------- 148
T +N+D GD+ RT KR+ W +ED+R
Sbjct: 125 TYVNVDSGDETPRTEKRIFWTQEEDVRMMSSWLLNSTDSTVGADRKNEQYWTDVEATYNE 184
Query: 149 TTPINRKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVDDYP 208
TTP +R+R K +KDR+ ++ +W F ++W KA ++YTSGY+D + A+ FY+ D
Sbjct: 185 TTPSHRRRNAKQIKDRFHKVNKWTDLFHSAWLKARMIYTSGYNDQMWIEKAHVFYIKDNE 244
Query: 209 --NEGPFTVLHCWKVLRDEPKWHAVLEELEKPHKRSLDDG---------SDTLSQKDIGE 257
N GPF ++ W ++ E KW L+ KR G S L ++ E
Sbjct: 245 KLNLGPFVLMEVWNTVKTEAKWITYNNGLKAARKRIATKGLGKEKEGEDSSPLYVDELDE 304
Query: 258 KERPMGRNEAKKQRNXXXXXXXXXXXXSLHEDMKKYMDVQAAASKRHEEFLGTQHRISDA 317
+ RPMG+ AKK + E++ K+ +Q + + L Q ++S
Sbjct: 305 QPRPMGQKRAKKLQYAQSKEVDHIDL----EELDKFSKLQNEQNANRLKVLEIQQKLSSE 360
Query: 318 KVEMCTIYELAVVSTFEGGLTKISAVQNDSVVRM 351
K+E I LA E + A + + RM
Sbjct: 361 KIEQTKISHLAAKEQMEAAKVQREARKLEVEARM 394
>Os01g0373400 Homeodomain-like containing protein
Length = 376
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 104/250 (41%), Gaps = 60/250 (24%)
Query: 65 PHTNS---FDPASSDCG------MDIHPPGGFLSMLQSGQQPLVPPHVLFXXXXXXXXXX 115
PH +S FD A D D+ PPGGF+S + Q H++
Sbjct: 88 PHASSQPWFDAAGGDPSSPGSWDQDVRPPGGFMSYFGNEAQN---SHLVGAVIHMSPLNQ 144
Query: 116 XXXXNSGTIINLDDGDD-VRTAKRLTWASDEDLR-------------------------- 148
+S + + G+D VRT KR+ W DED+R
Sbjct: 145 AHNGSSPPEVEILHGNDSVRTEKRIMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGE 204
Query: 149 -------TTPINRKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQ 201
TTP R+R K KDRW +I +W F ++ KA V+TSGYS + D A++
Sbjct: 205 VVETYNKTTPPLRRRNAKQCKDRWNKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHK 264
Query: 202 FYVDDYPN----EGPFTVLHCWKVLRDEPKWHAVLEELEKPHKRSL----------DDGS 247
FYVDD GP+ + WK+ RD PKW E L+ KR +D
Sbjct: 265 FYVDDNKECKDVVGPYMLTEVWKICRDVPKWKTYNENLKNARKRKAFHLEGESEENEDTC 324
Query: 248 DTLSQKDIGE 257
D + Q+ IG+
Sbjct: 325 DQMPQRPIGQ 334
>Os08g0178900 Homeodomain-like containing protein
Length = 389
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 131/341 (38%), Gaps = 63/341 (18%)
Query: 51 PPLGGQPGLWNGSLPHTNSFDPASS-------DCGMDIHPPGGFLSMLQSGQQP--LVPP 101
PP G + G P ++++ AS C D+HP GGF+S + Q LV
Sbjct: 8 PPFDGS---YRGGFPSSSAWLDASGGDESSPGSCDKDVHPRGGFMSYFGNHAQNSHLVGA 64
Query: 102 HVLFXXXXXXXXXXXXXXNSGTIINLDDGDDVRTAKRLTWASDEDLR------------- 148
+ N N + VRT KR+ W +ED+R
Sbjct: 65 PIYIADASSPPEVEILQGNDDGNGNGN----VRTEKRILWTEEEDIRLMSAWIEHSTDST 120
Query: 149 --------------------TTPINRKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTS 188
TTP RKR +K KDRW +I RW F ++ KA ++TS
Sbjct: 121 CGADKGGGQYWGEVVESYNKTTPPLRKRNLKQCKDRWHKINRWTDLFECAYVKARRIFTS 180
Query: 189 GYSDDQLRDFANQFYVDDYPNE--GPFTVLHCWKVLRDEPKWHAVLEELEKPHKR----- 241
GYS+ D A++FYVDD GPF ++ WK+ R+ KW E + KR
Sbjct: 181 GYSNQMWIDAAHKFYVDDNKEAKLGPFVLMEVWKICREVSKWKTYNENMRNARKRKSFHL 240
Query: 242 -----SLDDGSDTLSQKDIGEKERPMGRNEAKKQRNXXXXXXXXXXXXS--LHEDMKKYM 294
DD D + ++ +G+K +AK + N S + +Y
Sbjct: 241 EGDSEEADDTFDEMPKRPMGQKAAKKAALDAKIKSNGLGSSDDGHSKESPIQLDKFDRYS 300
Query: 295 DVQAAASKRHEEFLGTQHRISDAKVEMCTIYELAVVSTFEG 335
Q + + + L Q +IS K+E I L EG
Sbjct: 301 KFQEENNDKRMKLLDRQEKISSEKLEATKIAHLTAQEYKEG 341
>Os01g0385600 Homeodomain-like containing protein
Length = 211
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 46/193 (23%)
Query: 78 GMDIHPPGGFLSMLQSGQQPLVPPHVLFXXXXXXXXXXXXXXNSGTIINLDDGDDVRTAK 137
G++ P GG + +++ P+ HV + N ++G+ RT K
Sbjct: 25 GLESRPLGGLVDFIKNTTDPM--HHV----------TEGCQLQPINVENGNNGNSTRTEK 72
Query: 138 RLTWASDEDLR---------------------------------TTPINRKREVKHLKDR 164
RL W+++EDLR TTP +R R+VK +KDR
Sbjct: 73 RLGWSTEEDLRLVSAWLNNSNDPIESNFKKNDKYWADVAAAYNSTTPSSRFRQVKQVKDR 132
Query: 165 WQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVDDYPNEGPFTVLHCWKVLRD 224
+ +IK+ VG FC SWK+A +Y SG + L A + Y +D+ +GPF + CW L+
Sbjct: 133 FSKIKKKVGNFCCSWKEANSLYASGECNVDLMAKAQKIYENDFK-DGPFLLTQCWNELKT 191
Query: 225 EPKWHAVLEELEK 237
+PK HA L++L+K
Sbjct: 192 QPKCHAYLDQLDK 204
>Os01g0549300 Homeodomain-like containing protein
Length = 389
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 130/341 (38%), Gaps = 63/341 (18%)
Query: 51 PPLGGQPGLWNGSLPHTNSFDPASS-------DCGMDIHPPGGFLSMLQSGQQP--LVPP 101
PP G + G P ++++ AS D+HP GGF+S + Q LV
Sbjct: 8 PPFDGS---YRGGFPSSSAWLDASGGDESSPGSWDKDVHPRGGFMSYFGNHAQNSHLVGA 64
Query: 102 HVLFXXXXXXXXXXXXXXNSGTIINLDDGDDVRTAKRLTWASDEDL-------------- 147
+ N N + VRT KR+ W +ED+
Sbjct: 65 PIYIADASSPPEVEILQGNDDGNGNGN----VRTEKRILWTEEEDIILMSAWIEHSTDST 120
Query: 148 -------------------RTTPINRKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTS 188
+TTP RKR +K KDRW +I RW F ++ KA ++TS
Sbjct: 121 CGADKGGGQYWGEVVESYNKTTPPLRKRNLKQCKDRWHKINRWTDLFECAYVKARRIFTS 180
Query: 189 GYSDDQLRDFANQFYVDDYPNE--GPFTVLHCWKVLRDEPKWHAVLEELEKPHKR----- 241
GYS+ D A++FYVDD GPF ++ WK+ R+ KW + L KR
Sbjct: 181 GYSNQMWIDAAHKFYVDDNKEAKLGPFVLMEVWKICREVSKWKTYNDNLRNARKRKSFHL 240
Query: 242 -----SLDDGSDTLSQKDIGEKERPMGRNEAKKQRNXXXXXXXXXXXXS--LHEDMKKYM 294
DD D + ++ +G+K +AK + N S + +Y
Sbjct: 241 EGDSEEADDTFDEMPKRPMGQKAAKKAALDAKIKSNGLGSSDDGHSKESPIQLDKFDRYS 300
Query: 295 DVQAAASKRHEEFLGTQHRISDAKVEMCTIYELAVVSTFEG 335
Q + + + L Q +IS K+E I L EG
Sbjct: 301 KFQEENNDKRMKLLDRQEKISSEKLEATKIAHLTAQEYKEG 341
>Os01g0873000 Conserved hypothetical protein
Length = 238
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 80/154 (51%), Gaps = 7/154 (4%)
Query: 179 WKKAALVYTSGYSDDQLRDFANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEELE-- 236
WK+A ++ SG S+ L D + Y +D+ +GPF HCW VL EPKW A LE LE
Sbjct: 40 WKEANALWASGESEVNLMDRTVKSYEEDHKKDGPFMFKHCWDVLSKEPKWDAYLERLEGL 99
Query: 237 KPHKR--SLDDGSDTLSQKDIGEKERPMGRNEAKKQRNXXXXXXXXXXXXSLHEDMKKYM 294
+P KR ++++G D ERP+G +AK+Q+ L E+ K +
Sbjct: 100 EPDKRKFNVEEGVGHHFSLDDARDERPIGGKQAKEQQK---RKRKDQAIIDLEEEFHKLV 156
Query: 295 DVQAAASKRHEEFLGTQHRISDAKVEMCTIYELA 328
D Q A++ H+E L TQ R+S VE + LA
Sbjct: 157 DAQNTANEGHKEMLETQRRVSSENVEARKLKYLA 190
>Os02g0466700
Length = 686
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 149 TTPINRKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVDDYP 208
T+ NRKR V K W +K+ +G FC ++ +A ++SGYSDD + + A+ + +
Sbjct: 459 TSRSNRKRTVVQCKTHWGGVKKEIGKFCGAYSRARSTFSSGYSDDMIMEKAHIMFKSE-N 517
Query: 209 NEGPFTVLHCWKVLRDEPKWHAVLEELEKPHKRSLDDGSDTLSQKD 254
NE PFT+ + W+ L+D+PKW VLEE K + + + S +
Sbjct: 518 NEKPFTLEYMWRELKDQPKWRRVLEEDSKNKRTKISESGAYTSSSN 563
>Os09g0424900
Length = 149
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 155 KREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVDDYPNEGPFT 214
KR K + W +KR V FC + KA +TSGYSD+ + + A ++Y N+ PFT
Sbjct: 7 KRTAKQCRTHWDNVKRDVTKFCGFYAKARNTFTSGYSDEMIMEKAREWY-KSRNNDKPFT 65
Query: 215 VLHCWKVLRDEPKWHAVLEELEKPHKRSL-DDGSDTLSQKDIGEKE------RPMGRNEA 267
+ + WK L+D+PKW VLE+ K + + + G+ T S EKE RP G+ A
Sbjct: 66 LEYMWKDLKDQPKWRRVLEQSSKNKRNKISESGAYTSSSNQDTEKESVSKEKRPEGQKAA 125
Query: 268 KKQR 271
K+++
Sbjct: 126 KQRQ 129
>Os06g0534700
Length = 409
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 130 GDDVRTAKRLTWASDEDLRTTPIN-RKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTS 188
G+D ++ + + E P N KR K + W +KR V FC + KA +TS
Sbjct: 185 GNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQCRTHWDNVKRDVTKFCGFYSKARTTFTS 244
Query: 189 GYSDDQLRDFANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEE 234
GYSDD + + A ++Y + N+ PFT+ + WK L+D+PKW VLEE
Sbjct: 245 GYSDDMIMEKAREWY-KKHNNQKPFTLEYMWKDLKDQPKWRRVLEE 289
>Os11g0514200
Length = 409
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 130 GDDVRTAKRLTWASDEDLRTTPIN-RKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTS 188
G+D ++ + + E P N KR K + W +KR V FC + KA +TS
Sbjct: 185 GNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQCRTHWDNVKRDVTKFCGFYSKARTTFTS 244
Query: 189 GYSDDQLRDFANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEE 234
GYSDD + + A ++Y + N+ PFT+ + WK L+D+PKW VLEE
Sbjct: 245 GYSDDMIMEKAREWY-KKHNNQKPFTLEYMWKDLKDQPKWRRVLEE 289
>Os07g0575300
Length = 361
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 120 NSGTIINLDDGDDVRTAKRLTWASDEDLRTTPIN-RKREVKHLKDRWQRIKRWVGFFCAS 178
N ++ G+D ++ + + E P N KR K + W +KR V FC
Sbjct: 106 NRSQFVDPIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQCRTHWDNVKRDVTKFCGF 165
Query: 179 WKKAALVYTSGYSDDQLRDFANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEE 234
+ KA +TSGYSDD + + A ++Y + N+ PFT+ + WK L+D+PKW VLEE
Sbjct: 166 YSKARTTFTSGYSDDMIMEKACEWY-KKHNNQKPFTLEYMWKDLKDQPKWRRVLEE 220
>Os08g0255200
Length = 204
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 36/182 (19%)
Query: 123 TIINLDDGDDVRTAKRLTWASDEDLRTTPINRKREVKHLKDRWQRIKRWVGFFCASWKKA 182
+ N ++G+ RT KRL W+++EDLR +A
Sbjct: 58 NVENGNNGNATRTEKRLGWSTEEDLRL-------------------------------EA 86
Query: 183 ALVYTSGYSDDQLRDFANQFYVDDYPNEGPFTVLHCWKVLRDEPKWHAVLEELEKPHKRS 242
+Y SG + L D A + Y +D+ +G F + CW L+ +PKWHA L++L+K +KR
Sbjct: 87 NSLYASGECNVDLMDKALKMYENDF-KDGRFLFIECWNELKTQPKWHAYLDQLDKSNKRK 145
Query: 243 LDDGSDT-LSQKDIGEKERPMGRNEAKKQRNXXXXXXXXXXXXSLHEDMKKYMDVQAAAS 301
D T L ++I RPMG AK +R L +D K+M+ AA
Sbjct: 146 RDYADATPLDDEEI---PRPMGVKAAKAKRIGKGKGKVQDCTAELEDDTHKFMEAHEAAK 202
Query: 302 KR 303
++
Sbjct: 203 EQ 204
>Os04g0286500 Homeodomain-like containing protein
Length = 417
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 153 NRKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVDDYPNEGP 212
NRKR V K W +K+ + FC ++ +A ++SG+SDD + + A+ Y + N+
Sbjct: 200 NRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIMEKAHALYKSEN-NDKT 258
Query: 213 FTVLHCWKVLRDEPKWHAVLEELEKPHKRSLDDGSDTLSQKDIGEKERPMGRNEAK 268
FT+ + W+ L+D+PKW +LEE K +KR+ S + E E R E +
Sbjct: 259 FTLEYMWRELKDQPKWRRILEEDSK-NKRTKISESGAYTSSSNQETEEETSRKEKR 313
>Os09g0317700 Homeodomain-like containing protein
Length = 495
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 35/138 (25%)
Query: 128 DDGDDVRTAKRLTWASDEDLR------------------------TTPINRKREVKHLKD 163
DD + RTA+RL W +ED+R TP R+REVKHLK+
Sbjct: 115 DDAEPERTARRLAWTEEEDIRLISTWLINYKTDKYWDKVAAEYNSATPGARRREVKHLKN 174
Query: 164 RWQRIKRWVGFFCASWKKAALVYTSGYSDD---------QLRDFANQFYVDDYPNEGPFT 214
RWQR+ V F W + Y SG S+ A+ Y+++ ++ FT
Sbjct: 175 RWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHK--FT 232
Query: 215 VLHCWKVLRDEPKWHAVL 232
HCW + D+PKW +
Sbjct: 233 FGHCWNAVWDQPKWKEYI 250
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,175,845
Number of extensions: 495385
Number of successful extensions: 1011
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 982
Number of HSP's successfully gapped: 24
Length of query: 390
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 287
Effective length of database: 11,657,759
Effective search space: 3345776833
Effective search space used: 3345776833
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)