Os01g0261900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os01g0261900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.59 | 0.386 | 3.37 | 0.287 | 0.272 | 0.302 | -0.405 | 1.34 | -0.12 | 6.45 | 81.58 | 5928 | -- | -- |
| 69.68 | 0.389 | 3.37 | 0.147 | 0.272 | 0.345 | -0.432 | -- | -0.187 | 6.33 | 84 | 7292 | -- | -- |
| 67.97 | 0.384 | 3.37 | 0.291 | 0.278 | 0.304 | -- | 1.41 | -0.115 | 6.52 | 81.43 | 6057 | -- | -- |
| 70.05 | 0.39 | 3.37 | 0.168 | 0.268 | 0.352 | -- | -- | -0.181 | 6.42 | 86.36 | 7268 | -- | -- |
| 71.66 | 0.394 | 3.38 | 0.297 | -- | 0.305 | -- | 1.29 | -0.12 | -- | 81.02 | 5686 | -- | -- |
| 71.9 | 0.398 | 3.34 | 0.0942 | 0.267 | -- | -0.431 | -- | -0.0381 | 6.46 | -- | -- | -- | -- |
| 72.36 | 0.398 | 3.34 | 0.0888 | 0.265 | -- | -- | -- | -0.0365 | 6.65 | -- | -- | -- | -- |
| 73.61 | 0.4 | 3.37 | 0.176 | -- | 0.368 | -- | -- | -0.172 | -- | 86.59 | 6988 | -- | -- |
| 70.63 | 0.391 | 3.37 | -- | 0.269 | 0.304 | -- | -- | -0.184 | 6.59 | 85.97 | 7273 | -- | -- |
| 76.03 | 0.407 | 3.34 | 0.0951 | -- | -- | -- | -- | -0.0312 | -- | -- | -- | -- | -- |
| 72.57 | 0.398 | 3.34 | -- | 0.266 | -- | -- | -- | -0.0464 | 6.63 | -- | -- | -- | -- |
| 74.29 | 0.401 | 3.38 | -- | -- | 0.316 | -- | -- | -0.184 | -- | 85.98 | 6981 | -- | -- |
| 76.27 | 0.408 | 3.34 | -- | -- | -- | -- | -- | -0.0417 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.89 | humidity | 80.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 3 | 62.10 | radiation | 10.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 6 | 62.43 | humidity | 80.0 | 10 | < th | dose independent | rect. | 23 | 9 |
| 12 | 63.16 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 13 | 63.21 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 30 | 63.38 | wind | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 31 | 63.49 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 33 | 63.54 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 34 | 63.57 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 39 | 63.69 | temperature | 15.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 52 | 63.75 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 56 | 63.76 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 58 | 63.76 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 59 | 63.76 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 62 | 63.76 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 63 | 63.76 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 64 | 63.76 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 66 | 63.76 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 71 | 63.76 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 77 | 63.76 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 82 | 63.76 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 85 | 63.77 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 91 | 63.78 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 116 | 63.82 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 126 | 63.85 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 137 | 63.96 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 141 | 63.98 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 149 | 64.15 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 152 | 64.31 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 155 | 64.39 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 156 | 64.39 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 164 | 64.66 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 169 | 64.81 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 174 | 64.86 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 175 | 64.86 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 178 | 64.86 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 182 | 64.86 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 191 | 64.86 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 192 | 64.86 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 212 | 64.86 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 235 | 65.48 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 269 | 66.22 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 279 | 66.50 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 282 | 66.58 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 15 |
| 285 | 66.59 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 287 | 66.61 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 324 | 66.79 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 10 |
| 328 | 66.81 | wind | 1.0 | 10 | < th | dose independent | rect. | 21 | 6 |
| 335 | 66.83 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 343 | 66.96 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 347 | 67.00 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 351 | 67.03 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 355 | 67.07 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 1 | 7 |
| 360 | 67.11 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 19 |
| 370 | 67.22 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 22 | 12 |
| 375 | 67.25 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 381 | 67.32 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 3 |
| 391 | 67.43 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 3 | 7 |
| 392 | 67.44 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 409 | 67.53 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 419 | 67.58 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 420 | 67.58 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 461 | 67.63 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 464 | 67.64 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 482 | 67.68 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 488 | 67.69 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 3 | 11 |
| 490 | 67.69 | humidity | 70.0 | 4320 | > th | dose dependent | sin | 4 | NA |
| 491 | 67.69 | wind | 5.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 504 | 67.72 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 23 | 14 |
| 507 | 67.73 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 8 |
| 508 | 67.73 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 8 |
| 512 | 67.73 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 552 | 67.77 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 6 | NA |
| 577 | 67.81 | wind | 3.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 609 | 67.83 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 651 | 67.87 | wind | 7.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 704 | 67.91 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 725 | 67.93 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 744 | 67.94 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 16 |
| 758 | 67.96 | humidity | 80.0 | 4320 | < th | dose independent | sin | 3 | NA |
| 759 | 67.96 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 765 | 67.96 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 6 | NA |
| 802 | 67.98 | humidity | 80.0 | 4320 | > th | dose independent | sin | 3 | NA |
| 840 | 68.00 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 841 | 68.00 | temperature | 10.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 843 | 68.00 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 866 | 68.01 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 3 | 15 |
| 970 | 68.08 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 8 |
| 980 | 68.08 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 12 |