BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0261900 Os01g0261900|Os01g0261900
(193 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0261900 406 e-114
Os09g0241700 Homeodomain-like containing protein 275 2e-74
Os01g0385600 Homeodomain-like containing protein 256 1e-68
Os11g0282700 Homeodomain-like containing protein 177 4e-45
Os06g0521000 Homeodomain-like containing protein 177 6e-45
Os01g0527800 175 2e-44
Os08g0485150 157 3e-39
Os05g0348300 146 1e-35
Os10g0449100 138 3e-33
Os01g0821200 131 3e-31
Os06g0491500 118 3e-27
Os06g0716600 103 5e-23
Os01g0373400 Homeodomain-like containing protein 103 7e-23
Os08g0178900 Homeodomain-like containing protein 96 2e-20
Os01g0549300 Homeodomain-like containing protein 94 5e-20
Os02g0466700 94 6e-20
Os04g0286500 Homeodomain-like containing protein 93 1e-19
Os11g0506300 92 2e-19
Os08g0255200 92 3e-19
Os09g0317700 Homeodomain-like containing protein 84 6e-17
Os11g0514200 80 8e-16
Os06g0534700 80 9e-16
Os09g0318600 Homeodomain-like containing protein 80 1e-15
Os10g0410300 Homeodomain-like containing protein 73 1e-13
>Os01g0261900
Length = 193
Score = 406 bits (1043), Expect = e-114, Method: Compositional matrix adjust.
Identities = 193/193 (100%), Positives = 193/193 (100%)
Query: 1 MPSSSVCPLPMAAKTNIELQHDFEEWGVESRPPGGFVNLINAPSNHMHHVAEGSPSQPIN 60
MPSSSVCPLPMAAKTNIELQHDFEEWGVESRPPGGFVNLINAPSNHMHHVAEGSPSQPIN
Sbjct: 1 MPSSSVCPLPMAAKTNIELQHDFEEWGVESRPPGGFVNLINAPSNHMHHVAEGSPSQPIN 60
Query: 61 VENGDISRTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKS 120
VENGDISRTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKS
Sbjct: 61 VENGDISRTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKS 120
Query: 121 RVRQVKQVKDRFGKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYENDFKDGTCS 180
RVRQVKQVKDRFGKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYENDFKDGTCS
Sbjct: 121 RVRQVKQVKDRFGKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYENDFKDGTCS 180
Query: 181 AQYVQIMVLHFSK 193
AQYVQIMVLHFSK
Sbjct: 181 AQYVQIMVLHFSK 193
>Os09g0241700 Homeodomain-like containing protein
Length = 315
Score = 275 bits (702), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 129/151 (85%), Positives = 137/151 (90%)
Query: 27 GVESRPPGGFVNLINAPSNHMHHVAEGSPSQPINVENGDISRTKKRLLWTNDEDLRLISA 86
GVESRPPGGFVN IN PSNH+HHVAEGSPSQPINV NG ++RT KRL W DEDLRLISA
Sbjct: 8 GVESRPPGGFVNFINTPSNHVHHVAEGSPSQPINVVNGHVARTDKRLSWMKDEDLRLISA 67
Query: 87 WLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKSRVRQVKQVKDRFGKIKKKVGNFCCSW 146
WLNNSND IESNFKKNDKYWGDVAAAYNSTTPK+R R VKQVKDRFGKI+KKVGNFCCSW
Sbjct: 68 WLNNSNDPIESNFKKNDKYWGDVAAAYNSTTPKNRARLVKQVKDRFGKIRKKVGNFCCSW 127
Query: 147 KEANSLYASGESHDDLMAKAVKMYENDFKDG 177
KE NSLYASGES++DLM KA K+YENDFKDG
Sbjct: 128 KEVNSLYASGESNEDLMNKAQKIYENDFKDG 158
>Os01g0385600 Homeodomain-like containing protein
Length = 211
Score = 256 bits (653), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/180 (70%), Positives = 144/180 (80%), Gaps = 5/180 (2%)
Query: 1 MPSSSVCPLPMAAKTNIELQHDFEEWGVESRPPGGFVNLINAPSNHMHHVAEGSPSQPIN 60
M SS P AKT++++ D E+WG+ESRP GG V+ I ++ MHHV EG QPIN
Sbjct: 1 MAGSSAYRPPTDAKTDVQI--DLEQWGLESRPLGGLVDFIKNTTDPMHHVTEGCQLQPIN 58
Query: 61 VENGD---ISRTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTT 117
VENG+ +RT+KRL W+ +EDLRL+SAWLNNSND IESNFKKNDKYW DVAAAYNSTT
Sbjct: 59 VENGNNGNSTRTEKRLGWSTEEDLRLVSAWLNNSNDPIESNFKKNDKYWADVAAAYNSTT 118
Query: 118 PKSRVRQVKQVKDRFGKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYENDFKDG 177
P SR RQVKQVKDRF KIKKKVGNFCCSWKEANSLYASGE + DLMAKA K+YENDFKDG
Sbjct: 119 PSSRFRQVKQVKDRFSKIKKKVGNFCCSWKEANSLYASGECNVDLMAKAQKIYENDFKDG 178
>Os11g0282700 Homeodomain-like containing protein
Length = 514
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 118/189 (62%), Gaps = 33/189 (17%)
Query: 22 DFEEWGVESRPPGGFVNLINAPSNHMHH---------------------------VAEGS 54
D +E G++SRPPGGF++ PS+ +H V +
Sbjct: 92 DLQESGMDSRPPGGFLSYFQDPSSLQNHQPSIPLNYYATQQAAPWAPSPAEYRSPVTKSG 151
Query: 55 PSQ--PINVENGD----ISRTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGD 108
P + PIN+++G RT+KRL WT++ED+RL+SAWLNN NDSI NFKKND YWGD
Sbjct: 152 PGEQHPINIDSGGEETPTVRTEKRLTWTHEEDIRLVSAWLNNLNDSINGNFKKNDCYWGD 211
Query: 109 VAAAYNSTTPKSRVRQVKQVKDRFGKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVK 168
V AYNSTTP++R+RQ KQ+KDRF KIKK VG FCC++KE S+Y SG++ LM K
Sbjct: 212 VTTAYNSTTPRNRMRQEKQIKDRFHKIKKNVGRFCCAYKEVKSIYVSGQNELQLMEKVHA 271
Query: 169 MYENDFKDG 177
YE D+K+G
Sbjct: 272 TYEADYKEG 280
>Os06g0521000 Homeodomain-like containing protein
Length = 291
Score = 177 bits (448), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 125/205 (60%), Gaps = 29/205 (14%)
Query: 4 SSVCPLPMAA------KTNIELQHDFEEWGVESRPPGGFVNLINAPSNHMHHVAEGSPS- 56
++ PMA ++ I+L D +E G++ PPGGF++ PS +H P+
Sbjct: 57 AAASAFPMAQMKQGLDRSAIDLS-DLQERGMDFHPPGGFLSYFQDPSILQNHRPFVPPNY 115
Query: 57 -----------------QPINVENGD----ISRTKKRLLWTNDEDLRLISAWLNNSNDSI 95
QP+N+++GD RT+KRL W+ +ED+RL+SAWLNNSNDSI
Sbjct: 116 YPAEQVAPCSKLRPGAQQPVNIDSGDEEAHTVRTEKRLTWSTEEDIRLVSAWLNNSNDSI 175
Query: 96 ESNFKKNDKYWGDVAAAYNSTTPKSRVRQVKQVKDRFGKIKKKVGNFCCSWKEANSLYAS 155
NFKKND+YWGDV A YNSTTPK+R RQ KQ+KDRF KIKK VG FCC +KE S+Y S
Sbjct: 176 SGNFKKNDRYWGDVTAEYNSTTPKNRTRQEKQIKDRFHKIKKNVGRFCCVYKEVKSIYVS 235
Query: 156 GESHDDLMAKAVKMYENDFKDGTCS 180
G++ L KA Y+ D+K+G S
Sbjct: 236 GQNDMQLREKAEAAYQADYKEGPFS 260
>Os01g0527800
Length = 484
Score = 175 bits (443), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 124/205 (60%), Gaps = 29/205 (14%)
Query: 4 SSVCPLPMAA------KTNIELQHDFEEWGVESRPPGGFVNLINAPSNHMHHVAEGSPS- 56
++ PMA ++ I+L D +E G++ PPGGF++ PS +H P+
Sbjct: 57 AAASAFPMAQMKQGLDRSAIDLS-DLQERGMDFHPPGGFLSYFQDPSILQNHRPFVPPNY 115
Query: 57 -----------------QPINVENGDIS----RTKKRLLWTNDEDLRLISAWLNNSNDSI 95
QP+N+++GD RT+KRL W+ +ED+RL+SAWLNNSNDSI
Sbjct: 116 YPAEQVAPCSKLHPGAQQPVNIDSGDEEAPNVRTEKRLTWSTEEDIRLVSAWLNNSNDSI 175
Query: 96 ESNFKKNDKYWGDVAAAYNSTTPKSRVRQVKQVKDRFGKIKKKVGNFCCSWKEANSLYAS 155
NFKKND YWGDV A YNSTTPK+R RQ KQ+KDRF KIKK VG FCC +KE S+Y +
Sbjct: 176 SGNFKKNDCYWGDVTAEYNSTTPKNRTRQEKQIKDRFHKIKKNVGRFCCVYKEVKSIYVN 235
Query: 156 GESHDDLMAKAVKMYENDFKDGTCS 180
G++ L KA Y+ D+K+G S
Sbjct: 236 GQNDMQLREKAEAAYQADYKEGPFS 260
>Os08g0485150
Length = 165
Score = 157 bits (398), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/93 (86%), Positives = 82/93 (88%), Gaps = 9/93 (9%)
Query: 84 ISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKSRVRQVKQVKDRFGKIKKKVGNFC 143
ISAWLNNSND IESNFKKN+KYWGDVAAAYNSTTPKSRVRQVKQVKDRFGKIKK
Sbjct: 59 ISAWLNNSNDHIESNFKKNNKYWGDVAAAYNSTTPKSRVRQVKQVKDRFGKIKK------ 112
Query: 144 CSWKEANSLYASGESHDDLMAKAVKMYENDFKD 176
KEANSLYASGESHDDLMAK VK+YENDFKD
Sbjct: 113 ---KEANSLYASGESHDDLMAKTVKIYENDFKD 142
>Os05g0348300
Length = 1220
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 104/159 (65%), Gaps = 16/159 (10%)
Query: 27 GVESRPPGGFVNLINAPSNHMHHVAEGSPSQPINVENGD---ISRTKKRLLWTNDEDLRL 83
G+ESRP GG V+ I +N MHHV EG QPINVENG+ +RT+K L W+ +EDLRL
Sbjct: 1021 GLESRPLGGLVDFIKNTTNPMHHVTEGCQLQPINVENGNNGNATRTEKHLGWSTEEDLRL 1080
Query: 84 ISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKSRVRQVKQ-------VK----DRF 132
+SAWLNNSN+ IE NFKKNDKYW DVAAAYNSTTP SR RQVKQ VK R
Sbjct: 1081 VSAWLNNSNNPIELNFKKNDKYWADVAAAYNSTTPSSRFRQVKQEIPRPMGVKAAKAQRI 1140
Query: 133 GKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYE 171
GK K KV + C+ + + ++ ++H+ + ++ E
Sbjct: 1141 GKGKGKVQD--CTAELEDDIHKFMDAHEAAKEQQSELLE 1177
>Os10g0449100
Length = 424
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 101/174 (58%), Gaps = 26/174 (14%)
Query: 27 GVESRPPGGFVNLINAPSNHM-------------------------HHVAEGSPSQP-IN 60
G++ PPGGF++++ + H S ++P IN
Sbjct: 74 GMDIHPPGGFLSMLQTGQQPLVPPHVLFLATWPPMPPMAPTTNSGTTHARSRSKAKPVIN 133
Query: 61 VENGDISRTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKS 120
+++GD RT KRL W +DEDLRL+SAWL +SND I N KKN+ YWGDV YNSTTP +
Sbjct: 134 LDDGDDVRTAKRLTWASDEDLRLVSAWLYHSNDPINGNGKKNESYWGDVVELYNSTTPIN 193
Query: 121 RVRQVKQVKDRFGKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYENDF 174
R R+VK +KDR+ +IK+ VG FC SWK+A +Y SG S D L A + Y +D+
Sbjct: 194 RKREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVDDY 247
>Os01g0821200
Length = 356
Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 101/176 (57%), Gaps = 30/176 (17%)
Query: 27 GVESRPPGGFVNLI----------------------------NAPSNHMHHVAEGSPSQP 58
G++ PPGGF++++ N+ + H ++ P
Sbjct: 21 GMDIHPPGGFLSMLQTGQQPLVPPHVLFPATWPPMPPMAPATNSGTTHARSRSKAKPV-- 78
Query: 59 INVENGDISRTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTP 118
IN+++GD RT KRL W +DEDLRL+SAWL +SND I N KKN+ Y GDV YN+TTP
Sbjct: 79 INLDDGDNVRTAKRLTWASDEDLRLVSAWLYHSNDPINGNGKKNESYRGDVVELYNNTTP 138
Query: 119 KSRVRQVKQVKDRFGKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYENDF 174
+R R+VK +KD++ +IK+ VG FC SWK+A +Y SG S D L A + Y ND+
Sbjct: 139 INRKREVKHLKDQWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVNDY 194
>Os06g0491500
Length = 122
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/57 (92%), Positives = 56/57 (98%)
Query: 27 GVESRPPGGFVNLINAPSNHMHHVAEGSPSQPINVENGDISRTKKRLLWTNDEDLRL 83
GVESRPPGGFVNLINAPSNHMHHVAEGSPSQPINVENGD++RT+KRL WTNDEDLRL
Sbjct: 52 GVESRPPGGFVNLINAPSNHMHHVAEGSPSQPINVENGDVARTEKRLSWTNDEDLRL 108
>Os06g0716600
Length = 542
Score = 103 bits (258), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 82/159 (51%), Gaps = 22/159 (13%)
Query: 20 QHDFEEWGVESRPPGGFVN---LINAPSNHMHHVAEGSPSQP------------------ 58
+H +G S PP F + N + A SPS
Sbjct: 67 EHRSSRYGAASPPPSSFTDGSCFFNGSAGGFFGNAGQSPSDQNQSEDDYSTPISARDNTY 126
Query: 59 INVENGDIS-RTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTT 117
+NV++GD + RT+KR+ WT +ED+R++S+WL NS DS +KN++YW DV A YN TT
Sbjct: 127 VNVDSGDETPRTEKRIFWTQEEDVRMMSSWLLNSTDSTVGADRKNEQYWTDVEATYNETT 186
Query: 118 PKSRVRQVKQVKDRFGKIKKKVGNFCCSWKEANSLYASG 156
P R R KQ+KDRF K+ K F +W +A +Y SG
Sbjct: 187 PSHRRRNAKQIKDRFHKVNKWTDLFHSAWLKARMIYTSG 225
>Os01g0373400 Homeodomain-like containing protein
Length = 376
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 86/164 (52%), Gaps = 13/164 (7%)
Query: 26 WGVESRPPGGFVNLINAPSNHMHHVAEGSPSQPIN-VENG------------DISRTKKR 72
W + RPPGGF++ + + H V P+N NG D RT+KR
Sbjct: 109 WDQDVRPPGGFMSYFGNEAQNSHLVGAVIHMSPLNQAHNGSSPPEVEILHGNDSVRTEKR 168
Query: 73 LLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKSRVRQVKQVKDRF 132
++WT DED+R++SAWL +S D K +YWG+V YN TTP R R KQ KDR+
Sbjct: 169 IMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPLRRRNAKQCKDRW 228
Query: 133 GKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYENDFKD 176
KI K F C++ +A ++ SG S + + A K Y +D K+
Sbjct: 229 NKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDNKE 272
>Os08g0178900 Homeodomain-like containing protein
Length = 389
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 17/161 (10%)
Query: 32 PPGGFVNLINAPSNHMHHVAEGSP------SQPINVE---------NGDISRTKKRLLWT 76
P GGF++ + + H V G+P S P VE RT+KR+LWT
Sbjct: 44 PRGGFMSYFGNHAQNSHLV--GAPIYIADASSPPEVEILQGNDDGNGNGNVRTEKRILWT 101
Query: 77 NDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKSRVRQVKQVKDRFGKIK 136
+ED+RL+SAW+ +S DS K +YWG+V +YN TTP R R +KQ KDR+ KI
Sbjct: 102 EEEDIRLMSAWIEHSTDSTCGADKGGGQYWGEVVESYNKTTPPLRKRNLKQCKDRWHKIN 161
Query: 137 KKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYENDFKDG 177
+ F C++ +A ++ SG S+ + A K Y +D K+
Sbjct: 162 RWTDLFECAYVKARRIFTSGYSNQMWIDAAHKFYVDDNKEA 202
>Os01g0549300 Homeodomain-like containing protein
Length = 389
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 17/167 (10%)
Query: 26 WGVESRPPGGFVNLINAPSNHMHHVAEGSP------SQPINVE---------NGDISRTK 70
W + P GGF++ + + H V G+P S P VE RT+
Sbjct: 38 WDKDVHPRGGFMSYFGNHAQNSHLV--GAPIYIADASSPPEVEILQGNDDGNGNGNVRTE 95
Query: 71 KRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKSRVRQVKQVKD 130
KR+LWT +ED+ L+SAW+ +S DS K +YWG+V +YN TTP R R +KQ KD
Sbjct: 96 KRILWTEEEDIILMSAWIEHSTDSTCGADKGGGQYWGEVVESYNKTTPPLRKRNLKQCKD 155
Query: 131 RFGKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYENDFKDG 177
R+ KI + F C++ +A ++ SG S+ + A K Y +D K+
Sbjct: 156 RWHKINRWTDLFECAYVKARRIFTSGYSNQMWIDAAHKFYVDDNKEA 202
>Os02g0466700
Length = 686
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 93/169 (55%), Gaps = 15/169 (8%)
Query: 31 RPPGGFV----NLINAPSNHMHHVAEGSPSQ-----PINVENG-----DISRTKKRLLWT 76
RPP +V + + S+H A P++ +++E + R R+ WT
Sbjct: 359 RPPENWVYSPNQITGSASSHGSESASQCPARYEENNVVDIEESSDNSQEAGRRGTRVNWT 418
Query: 77 NDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKS-RVRQVKQVKDRFGKI 135
+E++RL+S+WLNNS D I N KK + YW VA +NS T +S R R V Q K +G +
Sbjct: 419 EEENIRLLSSWLNNSVDPINGNDKKAEYYWKAVAVEFNSNTSRSNRKRTVVQCKTHWGGV 478
Query: 136 KKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYENDFKDGTCSAQYV 184
KK++G FC ++ A S ++SG S D +M KA M++++ + + +Y+
Sbjct: 479 KKEIGKFCGAYSRARSTFSSGYSDDMIMEKAHIMFKSENNEKPFTLEYM 527
>Os04g0286500 Homeodomain-like containing protein
Length = 417
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 39 LINAPSNHMHHVAEGSPSQP-----INVENG-----DISRTKKRLLWTNDEDLRLISAWL 88
++ + S+H A P++ +N+E + R + WT +E+LRL+S+WL
Sbjct: 108 VVGSASSHGSKSASQCPARQEENNLVNIEESSDNSQETGRRGTHVNWTEEENLRLLSSWL 167
Query: 89 NNSNDSIESNFKKNDKYWGDVAAAYN-STTPKSRVRQVKQVKDRFGKIKKKVGNFCCSWK 147
NNS DSI N KK + YW DVAA +N + + +R R V Q K +G +KK + FC ++
Sbjct: 168 NNSLDSINGNDKKGEYYWRDVAAEFNGNASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYS 227
Query: 148 EANSLYASGESHDDLMAKAVKMYENDFKDGTCSAQYV 184
A ++SG S D +M KA +Y+++ D T + +Y+
Sbjct: 228 RARRTWSSGFSDDMIMEKAHALYKSENNDKTFTLEYM 264
>Os11g0506300
Length = 438
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 71/137 (51%), Gaps = 22/137 (16%)
Query: 20 QHDFEEWGVESRPPGGFVN---LINAPSNHMHHVAEGSP----------SQPI------- 59
+H +G S PP F + N + A SP S PI
Sbjct: 67 EHRSSGYGAASPPPSSFTDGSCFFNGSAGGFFGSAGQSPGGQNQSEDDYSTPISARDNTY 126
Query: 60 -NVENGD-ISRTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTT 117
NV++GD RT+KR+ WT +ED+R++S+WL NS DS +KN++YW DV A YN TT
Sbjct: 127 VNVDSGDETPRTEKRIFWTQEEDVRMMSSWLLNSTDSTVGADRKNEQYWTDVEATYNETT 186
Query: 118 PKSRVRQVKQVKDRFGK 134
P R R KQ+KDRF K
Sbjct: 187 PSHRRRNAKQIKDRFHK 203
>Os08g0255200
Length = 204
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 5/86 (5%)
Query: 1 MPSSSVCPLPMAAKTNIELQHDFEEWGVESRPPGGFVNLINAPSNHMHHVAEGSPSQPIN 60
M SS P AKT++++ D E+WG+ESRP GGFV+ I +N MHHV EG QPIN
Sbjct: 1 MAGSSAYRPPTDAKTDVQV--DLEQWGLESRPLGGFVDFIKNTTNLMHHVTEGCQLQPIN 58
Query: 61 VE---NGDISRTKKRLLWTNDEDLRL 83
VE NG+ +RT+KRL W+ +EDLRL
Sbjct: 59 VENGNNGNATRTEKRLGWSTEEDLRL 84
>Os09g0317700 Homeodomain-like containing protein
Length = 495
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 32 PPGGFVNLINAPSNHMHHVAEGSPSQPINV--------ENGDISRTKKRLLWTNDEDLRL 83
PP G + P+ M A P +V ++ + RT +RL WT +ED+RL
Sbjct: 77 PPDGAMPSPYVPATVMPSKAPSDQGTPHSVTGPGQQDDDDAEPERTARRLAWTEEEDIRL 136
Query: 84 ISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKSRVRQVKQVKDRFGKIKKKVGNFC 143
IS WL N K DKYW VAA YNS TP +R R+VK +K+R+ ++ KV +F
Sbjct: 137 ISTWLINY---------KTDKYWDKVAAEYNSATPGARRREVKHLKNRWQRMINKVAHFN 187
Query: 144 CSWKEANSLYASGES 158
W + Y SG+S
Sbjct: 188 DCWCRVMAKYPSGQS 202
>Os11g0514200
Length = 409
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 68 RTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKS-RVRQVK 126
R R+ WT D+++RL+S+WLNNS D I+ N KK+++YW VA +NS P + R K
Sbjct: 156 RRGTRINWTEDDNIRLMSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPK 215
Query: 127 QVKDRFGKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYE 171
Q + + +K+ V FC + +A + + SG S D +M KA + Y+
Sbjct: 216 QCRTHWDNVKRDVTKFCGFYSKARTTFTSGYSDDMIMEKAREWYK 260
>Os06g0534700
Length = 409
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 68 RTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKS-RVRQVK 126
R R+ WT D+++RL+S+WLNNS D I+ N KK+++YW VA +NS P + R K
Sbjct: 156 RRGTRINWTEDDNIRLMSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPK 215
Query: 127 QVKDRFGKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYE 171
Q + + +K+ V FC + +A + + SG S D +M KA + Y+
Sbjct: 216 QCRTHWDNVKRDVTKFCGFYSKARTTFTSGYSDDMIMEKAREWYK 260
>Os09g0318600 Homeodomain-like containing protein
Length = 527
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 61 VENGDISRTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKS 120
+N + + KRL WT ED+RLISAWL + K D+YW V A YNST P +
Sbjct: 114 TDNAEPEKATKRLYWTEKEDIRLISAWLI---------YYKTDRYWEKVVAEYNSTIPAT 164
Query: 121 RVRQVKQVKDRFGKIKKKVGNFCCSWKEANSLYASGESHD-DLMAKAVKMY 170
R R+++ VK + KI +KV +F W + Y SG S LM K MY
Sbjct: 165 RRRELQHVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMY 215
>Os10g0410300 Homeodomain-like containing protein
Length = 293
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 70 KKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKS-RVRQVKQV 128
+ R+ WT +E+L L+S W++ S D ++ +K++ YW VA +N++ P + R VKQ+
Sbjct: 55 RTRINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQL 114
Query: 129 KDRFGKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYENDFKDGTCSAQYV 184
K +G +K+ + FC + + + SG+S D +M A ++E + KD + +Y+
Sbjct: 115 KTHWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYM 170
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.129 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,436,323
Number of extensions: 321646
Number of successful extensions: 584
Number of sequences better than 1.0e-10: 25
Number of HSP's gapped: 571
Number of HSP's successfully gapped: 25
Length of query: 193
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 98
Effective length of database: 12,075,471
Effective search space: 1183396158
Effective search space used: 1183396158
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 153 (63.5 bits)