BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0187900 Os01g0187900|AK071611
(366 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0187900 Similar to Transcription factor MYBS2 638 0.0
Os10g0561400 Similar to Transcription factor MYBS3 186 2e-47
Os08g0144000 Zinc finger, CCHC-type domain containing protein 155 5e-38
Os01g0603300 Similar to MCB2 protein 150 1e-36
Os01g0192300 Similar to I-box binding factor (Fragment) 148 6e-36
Os05g0195700 Similar to Transcription factor MYBS2 143 2e-34
AK105558 138 5e-33
Os10g0562100 Homeodomain-like containing protein 129 2e-30
Os08g0151000 Similar to MCB1 protein 124 1e-28
Os05g0589400 Similar to I-box binding factor (Fragment) 122 6e-28
Os01g0524500 Similar to Transcription factor MYBS3 121 8e-28
Os05g0449900 Homeodomain-like containing protein 118 9e-27
Os04g0676700 Similar to MCB1 protein 118 9e-27
Os01g0142500 Homeodomain-like containing protein 117 9e-27
Os01g0853700 Similar to MCB1 protein 113 2e-25
Os04g0341900 111 1e-24
Os05g0442400 Similar to MybSt1 104 9e-23
Os01g0863300 Similar to MCB2 protein 99 4e-21
Os06g0173400 79 4e-15
Os06g0173300 79 7e-15
Os06g0173200 74 2e-13
Os03g0837200 72 6e-13
Os02g0511200 71 1e-12
>Os01g0187900 Similar to Transcription factor MYBS2
Length = 366
Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/366 (88%), Positives = 324/366 (88%)
Query: 1 MTRRCSHCSNNGHNARTCPARXXXXXXXXVRLFGVRLTSPPEVAMKKSASMSCIXXXXXX 60
MTRRCSHCSNNGHNARTCPAR VRLFGVRLTSPPEVAMKKSASMSCI
Sbjct: 1 MTRRCSHCSNNGHNARTCPARGGGGGGGGVRLFGVRLTSPPEVAMKKSASMSCIASSLGS 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPTHASCSTNGRGERKKGTPWTEEEHRMFLM 120
DDPTHASCSTNGRGERKKGTPWTEEEHRMFLM
Sbjct: 61 GGGSGGSSPAGTGRGGGGGGEGAAGYASDDPTHASCSTNGRGERKKGTPWTEEEHRMFLM 120
Query: 121 GLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRKRRSSLFDMVPEMPMDE 180
GLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRKRRSSLFDMVPEMPMDE
Sbjct: 121 GLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRKRRSSLFDMVPEMPMDE 180
Query: 181 SPVVVEQLMLHSTQDEATSSNQLPISHLVKQKEPEFARHLSDLQLRKHEESEFTEPSLAA 240
SPVVVEQLMLHSTQDEATSSNQLPISHLVKQKEPEFARHLSDLQLRKHEESEFTEPSLAA
Sbjct: 181 SPVVVEQLMLHSTQDEATSSNQLPISHLVKQKEPEFARHLSDLQLRKHEESEFTEPSLAA 240
Query: 241 LDLEMNHAAPFKTKFVLTMPTFYPALIPVPLTLWPPNVANVGESGTNHEILKPTPVNGKE 300
LDLEMNHAAPFKTKFVLTMPTFYPALIPVPLTLWPPNVANVGESGTNHEILKPTPVNGKE
Sbjct: 241 LDLEMNHAAPFKTKFVLTMPTFYPALIPVPLTLWPPNVANVGESGTNHEILKPTPVNGKE 300
Query: 301 VINKADEVVGMSKLTIGDGSSNSIEPSALSLQLTGPTNTRQSAFHVNPPMAGPDLNKRNN 360
VINKADEVVGMSKLTIGDGSSNSIEPSALSLQLTGPTNTRQSAFHVNPPMAGPDLNKRNN
Sbjct: 301 VINKADEVVGMSKLTIGDGSSNSIEPSALSLQLTGPTNTRQSAFHVNPPMAGPDLNKRNN 360
Query: 361 SPIHAV 366
SPIHAV
Sbjct: 361 SPIHAV 366
>Os10g0561400 Similar to Transcription factor MYBS3
Length = 234
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 146/245 (59%), Gaps = 22/245 (8%)
Query: 105 KKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRK 164
+ G PWTEEEHR FL+GLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQ+N +RRK
Sbjct: 7 EAGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMTRRK 66
Query: 165 RRSSLFDMVPEMPMDESPVVVEQLMLHSTQDEATSSNQLPISHLVKQKEPEFARHLSDLQ 224
RRSSLFDMVP+ MD P+ Q P + ++ Q R ++
Sbjct: 67 RRSSLFDMVPDESMDLPPL---------------PGGQEPETQVLNQPALPPPREEEEVD 111
Query: 225 LRKHEESEFTEPSLAALDLEMNHAAPFKTKFVLTMPTFYPALIPVPLTLWPPNVANVGES 284
+ + S E S A+ + N ++ + + +P ++ + + W G
Sbjct: 112 SMESDTSAVAESSSASAIMPDN----LQSTYPVIVPAYFSPFLQFSVPFWQNQKDEDGPV 167
Query: 285 GTNHEILKPTPVNGKEVINKADEVVGMSKLTIGDGSSNSIEPSALSLQLTGPTNTRQSAF 344
HEI+KP PV+ K IN DE+VGMSKL+IG+ + ++ ++LSL L G N RQSAF
Sbjct: 168 QETHEIVKPVPVHSKSPIN-VDELVGMSKLSIGESNQETVS-TSLSLNLVGGQN-RQSAF 224
Query: 345 HVNPP 349
H NPP
Sbjct: 225 HANPP 229
>Os08g0144000 Zinc finger, CCHC-type domain containing protein
Length = 383
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 97/178 (54%), Gaps = 36/178 (20%)
Query: 3 RRCSHCSNNGHNARTCPARXXXXXXXXVRLFGVRLTSPP-------EVAMKKSASMSCIX 55
RRCS C ++GHNARTC AR V+LFGVR+ P M+KSASM +
Sbjct: 20 RRCSQCGHHGHNARTCTARGP------VKLFGVRIGDKPPTAAAGGGGGMRKSASMGSLA 73
Query: 56 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPTHASCSTNGRGERKKGTPWTEEEH 115
N RK+G W+EEEH
Sbjct: 74 QLAEGGGGGGGRE-----------------------EGYGSDGNDDKRRKRGEAWSEEEH 110
Query: 116 RMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRKRRSSLFDMV 173
+ FL+GL KLGKGDWRGISRN+V SRTPTQVASHAQKYFIRQTN RRKRRSSLFDMV
Sbjct: 111 KKFLLGLSKLGKGDWRGISRNYVGSRTPTQVASHAQKYFIRQTNVHRRKRRSSLFDMV 168
>Os01g0603300 Similar to MCB2 protein
Length = 301
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 106/199 (53%), Gaps = 25/199 (12%)
Query: 1 MTRRCSHCSNNGHNARTCPARXXXX--------------XXXXVRLFGVRL--------- 37
M R+CS+C N GHN+RTC + +RLFGV++
Sbjct: 1 MARKCSYCGNYGHNSRTCSSSASAGHRDTTMLCDGGDGGGGSGLRLFGVQVHVAAGGGGG 60
Query: 38 TSPPEVAMKKSASMSCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPTHASCS 97
+ MKKS SM C+ + S
Sbjct: 61 GGGGGLPMKKSYSMDCLQLAAAGAAPGSLVSPSSSSSSSMLLSIDEGGLERASNGYLSDG 120
Query: 98 TNGR--GERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFI 155
+GR ERKKG PW+EEEHR+FL+GL+KLGKGDWRGISR++V +RTPTQVASHAQK+F+
Sbjct: 121 PHGRIVQERKKGVPWSEEEHRLFLVGLEKLGKGDWRGISRSYVTTRTPTQVASHAQKFFL 180
Query: 156 RQTNSSRRKRRSSLFDMVP 174
RQ++ ++KRRSSLFDMVP
Sbjct: 181 RQSSIGKKKRRSSLFDMVP 199
>Os01g0192300 Similar to I-box binding factor (Fragment)
Length = 310
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 112/207 (54%), Gaps = 20/207 (9%)
Query: 1 MTRRCSHCSNNGHNARTCPARXXXXXXXX---------VRLFGVRLTSPPEVAMKKSASM 51
M R+CS C NNGHN+RTC + VRLFGV+L +KK SM
Sbjct: 1 MARKCSSCGNNGHNSRTCTGQRSLQESGGGYGGGGAGGVRLFGVQLHVG-GAPLKKCFSM 59
Query: 52 SCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPT-------HASCSTNGRG-E 103
C+ + + S R E
Sbjct: 60 ECLSSPSPSPSPAYYAAVAAAASNSSPTVSSSSSLVSVEEAGEKMANGYLSDGLMARAQE 119
Query: 104 RKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRR 163
RKKG PWTEEEHR FL+GL+KLGKGDWRGISR+FV +RTPTQVASHAQKYF+RQ++ +++
Sbjct: 120 RKKGVPWTEEEHRKFLVGLEKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQSSLTQK 179
Query: 164 KRRSSLFDMVPEMPMDESPVVVEQLML 190
KRRSSLFD++ + +++P V E+L L
Sbjct: 180 KRRSSLFDVIED--AEKAPSVNERLKL 204
>Os05g0195700 Similar to Transcription factor MYBS2
Length = 287
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 100/192 (52%), Gaps = 23/192 (11%)
Query: 1 MTRRCSHCSNNGHNARTCPARXX-----------------XXXXXXVRLFGVRL-TSPPE 42
M R+CS C NNGHN+RTC + +RLFGV+L
Sbjct: 1 MARKCSSCGNNGHNSRTCSGQRVLDHSISSSNSGSTTAAAATACGGLRLFGVQLQVGGGS 60
Query: 43 VAMKKSASMSCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPTHASCSTNGR- 101
+KK SM C+ + S GR
Sbjct: 61 SPLKKCLSMECLASPAYYGASASPSVSSSSSSLVSIEENTERVSNG----YLSDGLMGRV 116
Query: 102 GERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSS 161
ERKKG PWTEEEH+MFL GL KLGKGDWRGISR+FV +RTPTQVASHAQKYF+RQ + +
Sbjct: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
Query: 162 RRKRRSSLFDMV 173
++KRRSSLFD+V
Sbjct: 177 QKKRRSSLFDVV 188
>AK105558
Length = 90
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 62/69 (89%), Positives = 66/69 (95%)
Query: 107 GTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRKRR 166
G PWTEEEHR FL+GLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQ+N +RRKRR
Sbjct: 10 GVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMTRRKRR 69
Query: 167 SSLFDMVPE 175
SSLFDMVP+
Sbjct: 70 SSLFDMVPD 78
>Os10g0562100 Homeodomain-like containing protein
Length = 265
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 68/80 (85%)
Query: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR 162
ERKKG PWTEEEH+ FL GL++LGKGDWRGIS+NFV SRT TQVASHAQKYF+RQTN +
Sbjct: 94 ERKKGVPWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKYFLRQTNPGK 153
Query: 163 RKRRSSLFDMVPEMPMDESP 182
+KRR+SLFD+V E D+ P
Sbjct: 154 KKRRASLFDVVAECSDDQLP 173
>Os08g0151000 Similar to MCB1 protein
Length = 295
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 61/67 (91%)
Query: 107 GTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRKRR 166
PWTEEEHR FL GL+KLGKGDWRGIS+NFV +RTPTQVASHAQKYF+RQTN +++KRR
Sbjct: 7 AVPWTEEEHRTFLAGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQTNPNKKKRR 66
Query: 167 SSLFDMV 173
SSLFDM+
Sbjct: 67 SSLFDMM 73
>Os05g0589400 Similar to I-box binding factor (Fragment)
Length = 270
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 67/76 (88%), Gaps = 3/76 (3%)
Query: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR 162
ERKKG PW+E+EHR+FL GL+KLGKGDWRGISR+FV +RTPTQVASHAQK+F+R ++++
Sbjct: 114 ERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAAK 173
Query: 163 R---KRRSSLFDMVPE 175
+ KRRSSLFDMV +
Sbjct: 174 KTNNKRRSSLFDMVQD 189
>Os01g0524500 Similar to Transcription factor MYBS3
Length = 284
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Query: 95 SCSTNGRGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYF 154
SCS ER+KG PWTEEEHR+FL+GL K GKGDWR ISRNFV+SRTPTQVASHAQKYF
Sbjct: 108 SCS-KAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYF 166
Query: 155 IRQTNSSRRKRRSSLFDM 172
IR + +R +RRSS+ D+
Sbjct: 167 IRLNSMNRDRRRSSIHDI 184
>Os05g0449900 Homeodomain-like containing protein
Length = 315
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 60/70 (85%)
Query: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR 162
ERKKG PWTEEEH++FLMGL+K G+GDWR ISRNFV SRTPTQVASHAQKYFIR + +
Sbjct: 146 ERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGGK 205
Query: 163 RKRRSSLFDM 172
KRRSS+ D+
Sbjct: 206 DKRRSSIHDI 215
>Os04g0676700 Similar to MCB1 protein
Length = 318
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 61/70 (87%)
Query: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR 162
ER+KG WTE+EHR+FL+GL+K GKGDWR ISRNFV+SRTPTQVASHAQKYFIR + +R
Sbjct: 139 ERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNR 198
Query: 163 RKRRSSLFDM 172
+RRSS+ D+
Sbjct: 199 ERRRSSIHDI 208
>Os01g0142500 Homeodomain-like containing protein
Length = 294
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 69/97 (71%)
Query: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR 162
ERKKG PWTEEEH++FL+GL+K GKGDWR ISRNFV +RTPTQVASHAQKYFIR + +
Sbjct: 135 ERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVQTRTPTQVASHAQKYFIRLNSGGK 194
Query: 163 RKRRSSLFDMVPEMPMDESPVVVEQLMLHSTQDEATS 199
KRRSS+ D+ D+ P Q L S Q ++
Sbjct: 195 DKRRSSIHDITTVNLTDDRPPSPSQSSLISNQSNTST 231
>Os01g0853700 Similar to MCB1 protein
Length = 299
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 58/70 (82%)
Query: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR 162
ERKKG PWTEEEH+ FLMGL+K G+GDWR ISR FV SRTPTQVASHAQKYFIR + +
Sbjct: 132 ERKKGVPWTEEEHKSFLMGLKKYGRGDWRNISRYFVTSRTPTQVASHAQKYFIRLNSGGK 191
Query: 163 RKRRSSLFDM 172
KRRSS+ D+
Sbjct: 192 DKRRSSIHDI 201
>Os04g0341900
Length = 201
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 60/77 (77%)
Query: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSR 162
ER+KG PWTEEEHR+FL+GL K GKGD ISRNFV+SRTPTQVASHAQKYFIR + +R
Sbjct: 101 ERRKGIPWTEEEHRLFLLGLDKFGKGDLHSISRNFVISRTPTQVASHAQKYFIRLNSMNR 160
Query: 163 RKRRSSLFDMVPEMPMD 179
+RRSS+ D+ D
Sbjct: 161 DRRRSSIHDITSVTAGD 177
>Os05g0442400 Similar to MybSt1
Length = 182
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 4/88 (4%)
Query: 89 DDPTHASCSTNGRG--ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQV 146
DD +++ G G ER++G PWTEEEHR+FL GL+K G+GDWR ISR V +RTPTQV
Sbjct: 92 DDDNNSAGHGRGSGGDERRRGVPWTEEEHRLFLEGLEKYGRGDWRNISRWSVKTRTPTQV 151
Query: 147 ASHAQKYFIRQTNSSRR--KRRSSLFDM 172
ASHAQK+FIRQ N+S R +R S+ D+
Sbjct: 152 ASHAQKFFIRQANASSRGDSKRKSIHDI 179
>Os01g0863300 Similar to MCB2 protein
Length = 148
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Query: 102 GERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNS- 160
ER++G PW+E+EHR+FL GL + G+GDWR ISR V +RTPTQVASHAQKYFIRQ N+
Sbjct: 74 AERRRGVPWSEDEHRLFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAG 133
Query: 161 SRRKRRSSLFDM 172
+R +R S+ D+
Sbjct: 134 ARDSKRKSIHDI 145
>Os06g0173400
Length = 331
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 7/81 (8%)
Query: 99 NGRGERKKGTP-------WTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQ 151
N G R + P WT EEHR FL GL+ G+G+W+ IS NFV S+TP QV+SHAQ
Sbjct: 105 NQGGRRHRAAPTNTTRRFWTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQVSSHAQ 164
Query: 152 KYFIRQTNSSRRKRRSSLFDM 172
KYF R +++ K+R S+ D+
Sbjct: 165 KYFRRVESAAADKQRYSINDV 185
>Os06g0173300
Length = 394
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 7/81 (8%)
Query: 99 NGRGERKKGTP-------WTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQ 151
N G R + P WT EEHR FL GL+ G+G+W+ IS NFV S+TP QV+SHAQ
Sbjct: 168 NQGGGRHRAAPTNTTRRFWTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQVSSHAQ 227
Query: 152 KYFIRQTNSSRRKRRSSLFDM 172
KYF R +++ K+R S+ D+
Sbjct: 228 KYFRRVESAAADKQRYSINDV 248
>Os06g0173200
Length = 321
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 42/52 (80%)
Query: 105 KKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIR 156
K+ WTEEEHR+F++GL+ G+GDW+ IS++ V +RT QV+SHAQK+F++
Sbjct: 173 KRRVIWTEEEHRLFMVGLRVFGRGDWKNISKHLVTTRTAAQVSSHAQKFFLK 224
>Os03g0837200
Length = 212
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 97 STNGRGER------KKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHA 150
++G GE KK W+EEEHR L G++++G G W IS +V SRTP Q+ASH
Sbjct: 112 GSDGGGEEGKVVVEKKSGIWSEEEHRQCLRGIEEIGHGRWTQISIEYVPSRTPIQIASHT 171
Query: 151 QKYFIRQTNSSRRKRRSSLFD 171
QKYF+R ++R S+ D
Sbjct: 172 QKYFLRMAKPKEDRKRKSIHD 192
>Os02g0511200
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 100 GRGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTN 159
G G RKK WT EEH FL G+ GKG+W+ ++ FV +++ TQ+ASH QK+ IR+
Sbjct: 166 GGGPRKKAEMWTREEHSQFLHGISTYGKGNWKALASEFVKTKSSTQIASHYQKFCIREEK 225
Query: 160 SSRRK-RRSSLFDMV 173
K +R+S+ D+V
Sbjct: 226 RRLSKCKRASIHDIV 240
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.129 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,168,472
Number of extensions: 498984
Number of successful extensions: 2030
Number of sequences better than 1.0e-10: 23
Number of HSP's gapped: 2027
Number of HSP's successfully gapped: 23
Length of query: 366
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 264
Effective length of database: 11,709,973
Effective search space: 3091432872
Effective search space used: 3091432872
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)